Edem028717.1
Basic Information
- Insect
- Epinotia demarniana
- Gene Symbol
- Kdm5
- Assembly
- GCA_945869435.1
- Location
- CAMBUM010000544.1:850104-870181[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.4e-26 5.5e-22 79.4 0.0 2 89 101 184 100 184 0.93 2 2 2.9 2.1e+04 -2.6 0.0 50 78 276 301 266 303 0.60
Sequence Information
- Coding Sequence
- ATGGGAAAATGTGACGAAGCCAATGTTGAAGTTAGTATGGGGGACTCGGCGTCCCCCATGAAACCTGATAACTTTGCGTTCAGCGTGCCTCCGGAGGCGCCCGTGTTCGAGCCGACGCCGGAAGAGTTCCTGGATCCTCTGGCGTACATCAGCAAAATAAGGCCAATCGCGCAGAAGTCAGGAATATGCAAGATCAAACCCCCTCCGCACTGGCAACCCCCGTTCGCCGTGGACGTCGACCGGTTGCGGTTCACGCCGCGGATACAGCGGTTAAATGAATTGGAGGCCATCACCCGAGTGAAGCTGCAATTCCTCGACCAGATAATAAAGTTCTGGGAGCTGCAGGGCTCCGTTCTCAAGATCCCCACTGTTGAGAAGAAACCCCTCGATCTCTACTCCTTGCACAAAATCGTTAAGGAGGCTGGTGGCTTCGACACGTGCTCCGCGGAGCGCAAATGGTCCAAGATCGCCCGACGCCTGGGCCACCCGCAAGGCAAGGGGATCGGCTCCATACTCAAGAACCACTATGAGCGTATACTGTACCCGTACGACGTGTTTAAGAGCAGCGGCGCCGCTGAAAAAGACACAAAAATCGAAGTGAAAGGCGACCAAACCCCAGAGAAGGCCAACACTACTCGCAGCCGCTCGAACTCCAAATGCCCCGCCGTGAccccgccgcccccgcgccGCTTCAAGAGCTCGGAGCCCGAGCCGGCGGCCGAGGGCTCCCACACCGAGGGCGCGCTCGCCGGCGCTGATGAAGAAGTCAAGGAGCTCAAGACTCCTATTAAAGAGGAGAAGGAGAATGGGGAGCAGAGACGCAGCCCGCGCGAGAACAAATGGATGTCAGCGGCGGGTAgttgcggcgcgcgcgctcgtgTCACTCGCTCGACGCGCCTGCGCGAGCACCGCATGTCCAATATGACTGTCTCCGTCACTCCCGCGCCGCCTAACGCGAAGCTAGAGAGCATCGTGGACCCTCTGGCCAAGTATATGTGTCGCGTCTGCGGGCGAGGCGACATTGAAGAGCAAATGTTACTATGTGACGGCTGTGACGACTCGTATCACACGTTCTGCCTCGTGCCTCCGCTAGCCATCGTGCCTAAGGGCGACTGGCGATGCCCTGTGTGCCTCGCTGAGGAGGTAGCCAAACCGGCGGAGGCGTTCGGCTTCGAGCAGGCGTCACGAGAATACACACTGCAGCAGTTTGGAGAGATGGCCGACCAGTTTAAGTCAGACTACTTCAACATGCCTGTCCATATGGTGCCAACACCGACTGTCGAAAAGGAGTTCTGGCGTGTAGTTTCGTCTATAGATGAAGACGTCACTGTGGAATACGGAGCGGATCTACACTCTATGGATCATGGATCtgGATTCCCGACGAAATCCAGCGCACATCTATACCCAGGCGAGCAACAGTACGCCGAGTCCAGCTGGAACCTAAACAATCTGCCCGTTCTAGAGGGCTCCGTGCTGGGACACATCAATGCAGACATATCTGGGATGAAGCGCCCCTAA
- Protein Sequence
- MGKCDEANVEVSMGDSASPMKPDNFAFSVPPEAPVFEPTPEEFLDPLAYISKIRPIAQKSGICKIKPPPHWQPPFAVDVDRLRFTPRIQRLNELEAITRVKLQFLDQIIKFWELQGSVLKIPTVEKKPLDLYSLHKIVKEAGGFDTCSAERKWSKIARRLGHPQGKGIGSILKNHYERILYPYDVFKSSGAAEKDTKIEVKGDQTPEKANTTRSRSNSKCPAVTPPPPRRFKSSEPEPAAEGSHTEGALAGADEEVKELKTPIKEEKENGEQRRSPRENKWMSAAGSCGARARVTRSTRLREHRMSNMTVSVTPAPPNAKLESIVDPLAKYMCRVCGRGDIEEQMLLCDGCDDSYHTFCLVPPLAIVPKGDWRCPVCLAEEVAKPAEAFGFEQASREYTLQQFGEMADQFKSDYFNMPVHMVPTPTVEKEFWRVVSSIDEDVTVEYGADLHSMDHGSGFPTKSSAHLYPGEQQYAESSWNLNNLPVLEGSVLGHINADISGMKRP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00008681;
- 90% Identity
- iTF_00008681;
- 80% Identity
- -