Ahol036372.1
Basic Information
- Insect
- Acleris holmiana
- Gene Symbol
- Kdm5
- Assembly
- GCA_949316455.1
- Location
- OX438786.1:7799515-7818103[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.9e-25 4e-21 76.5 0.0 2 89 101 184 100 184 0.93 2 2 5.8 2.6e+04 -3.0 0.0 51 78 275 299 266 301 0.64
Sequence Information
- Coding Sequence
- ATGGGAAAATGTGATGAAGCCAATGTCGAAGTTAGTATGGGGGACTCGGCGTCCCCCATGAAACCTGATAATTTTACGTTCACCGTGCCCTATGAGGCACCTCTGTTCGAGCCGACGCCGGAAGAGTTCCTGGACCCTTTGGCGTACATCAGCAAAATAAGGCCAGTTGCGGAGAAGTTCGGAATATGCAAGATCAAGCCCCCCCAGcaCTGGCAACCACCATTCGCCCTAGATGTAGACCGTCTTCGGTTCACGCCGAGGATACAACGGTTAAATGAATTAGAGGCTATTACTCGAGTGAAACTCAACTTCCTCGATCAAATCATCAAGTTTTGGGAGCTTCAGGGATCAGTACTCAAGATCCCCACTGTCGAGAAAAAGCCCCTCGACCTGTATGCCCTGCACAAGCTTGTCAAAGAAGCTGATGGTTTCGAGGCTTGCTCTGCAGAGCGCAAGTGGTCGAAGATCGCCCGCCGCATGGGCCACCCCCAGGGCAAGGGCATAGGTTCAATCCTGAAGAACCATTACGAGCGGATTCTGTACCCGTACGATGTTTTTAAAAGCAGCGGGGCCGTCGGAGAAAATAAGGAGACTAAGATCGAAGTGAAAGTAGAACAGACTCCGGAGAAGGCGAACACGACCCGCAGCCGGTCGAACTCGAAGTGCCCGGCCGCCacgccgccgccggcgcgccGCTTCAAGACCTCCGAGCCCGAGCCCGCCGCCGAGGGCAGCCACACCGAGGGCGCGCTCGCCGGCGCCGACCCCGCCAAGACGCCCGTCAAGGAGGAGCGGGAGACCGGGGAGCAGCGACGCAGTCCCCGCGAGAACAAGTGGATGTCGGCCGCGGGCAGCTGCGGAGCGCGCGCGCGCGTGACGCGCTCCACGCGCCTGCGCGAGCACCGCATGTCCAACATGACCGTGTCCGTCACGCCCGCGCCGCCCAACGCCAAGCCGGACAGCGCGCCCGACCCGCTGGCCAAATATATGTGTCGCGTGTGCGGGCGCGGCGACATCGAGGAGCAGATGCTGCTGTGCGACGGGTGCGACGACTCGTACCACACGTTCTGCCTCGTGCCGCCGCTCGCCATCGTGCCCAAGGGCGACTGGCGCTGCCCCGTGTGTCTCGCCGAGGAGGTATCAAAACCCGCCGAGGCGTTCGGTTTCGAGCAGGGGACGCGCGAGTACACGCTACAGCAGTTCGGGGAGATGGCCGACCAGTTCAAGTCGGATTACTTCAACATGCCGGTCCATATGGTGCCGACGTCGACAGTGGAGCGCGAGTTCTGGCGCGTCGTATCGTCCATCGACGAGGACGTCACTGTCGAGTACGGCGCCGACCTGCACACCATGGACCATGGATCAGGTACGACCCACGCCACAGAATACAACACAAGGACTTGA
- Protein Sequence
- MGKCDEANVEVSMGDSASPMKPDNFTFTVPYEAPLFEPTPEEFLDPLAYISKIRPVAEKFGICKIKPPQHWQPPFALDVDRLRFTPRIQRLNELEAITRVKLNFLDQIIKFWELQGSVLKIPTVEKKPLDLYALHKLVKEADGFEACSAERKWSKIARRMGHPQGKGIGSILKNHYERILYPYDVFKSSGAVGENKETKIEVKVEQTPEKANTTRSRSNSKCPAATPPPARRFKTSEPEPAAEGSHTEGALAGADPAKTPVKEERETGEQRRSPRENKWMSAAGSCGARARVTRSTRLREHRMSNMTVSVTPAPPNAKPDSAPDPLAKYMCRVCGRGDIEEQMLLCDGCDDSYHTFCLVPPLAIVPKGDWRCPVCLAEEVSKPAEAFGFEQGTREYTLQQFGEMADQFKSDYFNMPVHMVPTSTVEREFWRVVSSIDEDVTVEYGADLHTMDHGSGTTHATEYNTRT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00420326; iTF_01547309; iTF_00736402; iTF_01091474; iTF_00710814; iTF_01281087; iTF_00658142; iTF_01463038;
- 90% Identity
- iTF_00658142; iTF_01463038;
- 80% Identity
- -