Basic Information

Insect: Epinotia brunnichana
Gene Symbol: ZNF516
Assembly: GCA_963854355.1
Location: OY977958.1:11585435-11588343[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 2.1e-07 2.7e-05 26.3 4.2 1 23 43 65 43 65 0.98

2 16 1.2e-05 0.0016 20.8 1.3 1 23 71 93 71 93 0.97

3 16 8.2e-08 1e-05 27.6 1.8 1 23 99 121 99 121 0.99

4 16 5.1e-08 6.5e-06 28.3 0.8 1 23 127 149 127 149 0.99

5 16 0.0012 0.15 14.5 4.6 1 23 173 195 173 195 0.98

6 16 0.00015 0.019 17.4 0.4 1 23 201 223 201 223 0.97

7 16 5.7e-05 0.0073 18.7 2.8 1 23 229 251 229 251 0.99

8 16 3.7e-07 4.7e-05 25.6 0.5 1 23 257 279 257 279 0.98

9 16 1e-06 0.00013 24.1 0.6 1 23 285 308 285 308 0.97

10 16 0.00014 0.017 17.5 1.1 1 23 320 343 320 343 0.95

11 16 3.6e-06 0.00045 22.5 5.0 1 23 350 372 350 372 0.97

12 16 9.6e-05 0.012 18.0 1.2 1 23 378 400 378 400 0.98

13 16 0.00082 0.1 15.0 1.7 1 23 406 428 406 428 0.97

14 16 6.7e-06 0.00086 21.6 4.6 1 23 434 456 434 456 0.98

15 16 0.00015 0.019 17.4 0.4 1 23 462 484 462 484 0.96

16 16 8.4e-07 0.00011 24.4 3.2 1 23 490 513 490 513 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	2.1e-07	2.7e-05	26.3	4.2	1	23	43	65	43	65	0.98
2	16	1.2e-05	0.0016	20.8	1.3	1	23	71	93	71	93	0.97
3	16	8.2e-08	1e-05	27.6	1.8	1	23	99	121	99	121	0.99
4	16	5.1e-08	6.5e-06	28.3	0.8	1	23	127	149	127	149	0.99
5	16	0.0012	0.15	14.5	4.6	1	23	173	195	173	195	0.98
6	16	0.00015	0.019	17.4	0.4	1	23	201	223	201	223	0.97
7	16	5.7e-05	0.0073	18.7	2.8	1	23	229	251	229	251	0.99
8	16	3.7e-07	4.7e-05	25.6	0.5	1	23	257	279	257	279	0.98
9	16	1e-06	0.00013	24.1	0.6	1	23	285	308	285	308	0.97
10	16	0.00014	0.017	17.5	1.1	1	23	320	343	320	343	0.95
11	16	3.6e-06	0.00045	22.5	5.0	1	23	350	372	350	372	0.97
12	16	9.6e-05	0.012	18.0	1.2	1	23	378	400	378	400	0.98
13	16	0.00082	0.1	15.0	1.7	1	23	406	428	406	428	0.97
14	16	6.7e-06	0.00086	21.6	4.6	1	23	434	456	434	456	0.98
15	16	0.00015	0.019	17.4	0.4	1	23	462	484	462	484	0.96
16	16	8.4e-07	0.00011	24.4	3.2	1	23	490	513	490	513	0.97

Sequence Information

Coding Sequence: ATGACagGTAAAATCAAGTTGGAGAAGTCAGACGTTGACATGGGTGATGGTGAAGTTGTATCACTGGCTCTCTACGGCGCTCCCCCCACCCCCTCGCAGCCTacccccgcgccgcgcggcacCGTCCACACCTGCGATATCTGCAACAAATCCTTCGACCACCAATCCGCGCTCAGAAACCACATGCGCATGCACACTGGAGAGAAGCCCTATGCCTGCAACGTATGTAACAAGAAATTCGCACGCAGAGGCAACTTGAACGAACATTTCAAATATCATATGGGGATCTTAAGATATTCTTGCAATATTTGCAATAAGAGATTTATACAGAAATCGTATTTGAAAGTGCATATGCTGACGCATACAGGAGAGAAACCTTACAGATGTGAAGTATGCAACAAAACATTCGCTCAAAAAGGCAACTTGACCGTTCATTTGAAAACTCATGTCAAATCTGAAGGTCGTGAAGAAGAGAAGGAATGCAAAGAGTCGCAAGATACAAAAACAGGCAAACCATACGAATGTGAAGTGTGCAAGAAACGTTTTGCACAGAGATGCAACTTGAACTTTCATATGAAGTATCATATAGGGGATGATCGGTTCGCCTGTGAAATATGCGAAAGGAAATTCACAAAACAGATCCTCTTGGACAAACATATACTTCGTCACACGAAGGGACCCCCTTACAAGTGCGACGAGTGCGATAGACAGTATAAATCGAAAACGGCTCTATGCCTCCATTTAAAAATTCACGCAGGGGACTATAGATTCATTTGCGATGTGTGCAGTAAACGATTCATACAAAAGAGCGGCCTCATAAAACATATGCGGATACACACAGGAGAAAAGCCGTATGCCTGTGACATATGCCAAAAAGCCTTCACTGTAAAATCAAATTTGACGTATCATTTGAGAGTCAAACACGGTCAAGGTGATCAGGGGGATCCAAACGCAGAGTTCCCATGTGAAACGtgcaataaaaaattcaaagctAAGTCTTCTTTGGACAGGCATGTCATGCAAAAccacacaggagacagaaaaaagTTTTGCTGCGAGATATGTGGTAAACAATTTACACAAAAGCATACGTTGAATAAACATATGGATGTGCATAAAGGAATAAAACCATTCATGTGCGAAATATGTAGTAAACGATTTAGATTAAAACCTACATTGAAAGCCCATAAACTGACACATTCAGATGAACGGCCATACGCGTGCGAAATATGTCAGAAGCGTTTCCGGCTGACCAAGTGTTTACAAGAACACATGGTAGTACACGAAAAAATCAAACGCCACACCTGCGATGTATGCAGTAAACAATTTAGACACAAATCGGCTTTGACGGTTCATATTCGACGGCACACAGGGCAGAAACCACACGCTTGTGATGTATGTAACAAGGAATTTATAGTGCTGGCTGAGTTAAAAACGCACTATCGCATTCACACCGGCGAGCAGCCTTTTATCTGTGAGATTTGTCATAAAAAGTTTTCGAGGCCGGATACTTTCAGGAGGCATCTTAGACGCGTTCATAATAGGAAGCCTTCTAAAGGTGCGTTGTCGCAGTACGGGCGCCCGGTGGAGGCGGAGCCTAATGCTGGCTTTAGGCGGTACGAGTCGCTAGCGCCAGTCGCGCTGGCGTACCATCGCTGGCAGGACGGGACTGTATAG
Protein Sequence: MTGKIKLEKSDVDMGDGEVVSLALYGAPPTPSQPTPAPRGTVHTCDICNKSFDHQSALRNHMRMHTGEKPYACNVCNKKFARRGNLNEHFKYHMGILRYSCNICNKRFIQKSYLKVHMLTHTGEKPYRCEVCNKTFAQKGNLTVHLKTHVKSEGREEEKECKESQDTKTGKPYECEVCKKRFAQRCNLNFHMKYHIGDDRFACEICERKFTKQILLDKHILRHTKGPPYKCDECDRQYKSKTALCLHLKIHAGDYRFICDVCSKRFIQKSGLIKHMRIHTGEKPYACDICQKAFTVKSNLTYHLRVKHGQGDQGDPNAEFPCETCNKKFKAKSSLDRHVMQNHTGDRKKFCCEICGKQFTQKHTLNKHMDVHKGIKPFMCEICSKRFRLKPTLKAHKLTHSDERPYACEICQKRFRLTKCLQEHMVVHEKIKRHTCDVCSKQFRHKSALTVHIRRHTGQKPHACDVCNKEFIVLAELKTHYRIHTGEQPFICEICHKKFSRPDTFRRHLRRVHNRKPSKGALSQYGRPVEAEPNAGFRRYESLAPVALAYHRWQDGTV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00658641;
90% Identity: iTF_00658641;
80% Identity: -