Ebru005782.1
Basic Information
- Insect
- Epinotia brunnichana
- Gene Symbol
- Gcfc2
- Assembly
- GCA_963854355.1
- Location
- OY977935.1:44331488-44360155[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-10 2.1e-06 29.6 0.5 4 97 1114 1180 1111 1193 0.84 2 2 0.00094 18 6.9 0.0 128 189 1229 1290 1223 1294 0.66
Sequence Information
- Coding Sequence
- ATGAAGGCGCGCGAGCACGGGGACGTGATCCCGTTGGCGGAGGCGGCGCAGGGCTCGCGGCTGCAGCGCGACGATGGCTCCGGCGACGACGACGAGGAGGGCCGCATCCACGTGCGCGGCCTGGACCTGCCCACCGACAAACCCAAACGCGGCACGGCGGCGGCGTCGGCGGACTCGGAGCTGGACAGCGAGGGTGAGGAGTGGGCCGCGCAGCAGCTGTACAAGGCAAGGGTCGCGCTCGCCGACCCGGCAGATGTAAATAAGTTGTGTTGCGACTCGCCAGAGAGCGCGGAGGCGCAGCTGAACCCATTCGCGGTGGCGCCGCCGCCCCCGCGGCTGCAGGAGGCGCCGGCGCACTTGCGTCCGCTGGCCGCGCCCTCCGGCCCGCACCCCTCCACGCCGCAGGCGCTGGTGGACGCCCTCACTGAGAGGAGGCGCCGGCGCACTTGCGCCCGCTGGCCGCGCCCTCCGGCCCGCACCCCTCCACGCCGCAGGCGCTGGTGGACGCCCTCACTGAGAGGTGAGTCCATACTATTCGCGGTGGCGCCGCCGCCCCCGCGGCTGCAGGAGGCGCCGGCGCACTTGCGCCCGCTGGCCGCGCCCTCCGGCCCGCACCCCTCCACGCCGCAGGCGCTGGTGGACGCCCTCACTGAGAGGCGCTGGTGGACGCCCTCACTGAGAGGTGAGTCCATACTATTCGCGGTGGCGCCGCCGCCCCCGCGGCTGCAGGAGGCGCCGGCGCACTTGCGCCCGCTGGCCGCGCCCTCCGGCCCGCACCCCTCCACGCCGCAGGCGCTGGTGGACGCCCTCACTGAGAGGCGCTGGTGGACGCCCTCACTGAGAGGTGAGTCCATACTATTCGCGGTGGCGCCGCCGCCCCCGCGGCTGCAGGAGGCGCCGGCGCACTTGCGCCCGCTGGCCGCGCCCTCCGGCCCGCACCCCTCCACGCCGCAGGCGCTGGTGGACGCCCTCACTGAGAGGCGCTGGTGGACGCCCTCACTGAGAGGTGAGTCCATACTATTCGCGGTGGCGCCGCCGCCCCCGCGGCTGCAGGAGGCGCCGGCGCACTTGCGCCCGCTGGCCGCGCCCTCCGGCCCGCACCCCTCCACGCCGCAGGCGCTGGTGGACGCCCTCACTGAGAGGCGCTGGTGGACGCCCTCACTGAGAGGTGAGTCCATACTATTCGCGGTGGCGCCGCCGCCCCCGCGGCTGCAGGAGGCGCCGGCGCACTTGCGCCCGCTGGCCGCGCCCTCCGGCCCGCACCCCTCCACGCCGCAGGCGCTGGTGGACGCCCTCACTGAGAGGCGCTGGTGGACGCCCTCACTGAGAGGTGAGTCCATACTATTCGCGGTGGCGCCGCCGCCCCCGCGGCTGCAGGAGGCGCCGGCGCACTTGCGCCCGCTGGCCGCGCCCTCCGGCCCGCACCCCTCCACGCCGCAGGCGCTGGTGGACGCCCTCACTGAGAGGCGCTGGTGGACGCCCTCACTGAGAGGTGAGTCCATACTATTCGCGGTGGCGCCGCCGCCCCCGCGGCTGCAGGAGGCGCCGGCGCACTTGCGCCCGCTGGCCGCGCCCTCCGGCCCGCACCCCTCCACGCCGCAGGCGCTGGTGGACGCCCTCACTGAGAGGCGCTGGTGGACGCCCTCACTGAGAGGTGAGTCCATACTATTCGCGGTGGCGCCGCCGCCCCCGCGGCTGCAGGAGGCGCCGGCGCACTTGCGCCCGCTGGCCGCGCCCTCCGGCCCGCACCCCTCCACGCCGCAGGCGCTGGTGGACGCCCTCACTGAGAGGCGCTGGTGGACGCCCTCACTGAGAGGTGAGTCCATACTATTCGCGGTGGCGCCGCCGCCCCCGCGGCTGCAGGAGGCGCCGGCGCACTTGCGCCCGCTGGCCGCGCCCTCCGGCCCGCACCCCTCCACGCCGCAGGCGCTGGTGGACGCCCTCACTGGGAGGCGCTGGTGGACGCCCTCACTGGGAGGTGAGTCCATACTATTCGCGGTGGCGCCGCCGCCCCCGCGGCTGCAGGAGGCGCCGGCGCACTTGCGCCCGCTGGCCGCGCCCTCCGGCCCGCACCCCTCCACGCCGCAGGCGCTGGTGGACGCCCTCACTGAGAGGCGCTGGTGGACGCCCTCACTGAGAGGTGAGTCCATACTATTCGCGGTGGCGCCGCCGCCCCCGCGGCTGCAGGAGGCGCCGGCGCACTTGCGCCCGCTGGCCGCGCCCTCCGGCCCGCACCCCTCCACGCCGCAGGCGCTGGTGGACGCCCTCACTGAGAGGCGCTGGTGGACGCCCTCACTGAGAGGTGAGTCCATACTATTCGCGGTGGCGCCGCCGCCCCCGCGGCTGCAGGAGGCGCCGGCGCACTTGCGCCCGCTGGCCGCGCCCTCCGGCCCGCACCCCTCCACGCCGCAGGCGCTGGTGGACGCCCTCACTGAGAGGCGCTGGTGGACGCCCTCACTGGGAGGTGAGTCCATACTATTCGCGGTGGCGCCGCCGCCCCCGCGGCTGCAGGAGGCGCCGGCGCACTTGCGCCCGCTGGCCGCGCCCTCCGGCCCGCACCCCTCCACGCCGCAGGCGCTGGTGGACGCCCTCACTGAGAGGCGCTGGTGGACGCCCTCACTGGGAGGTGAGTCCATACTATTCGCGGTGGCGCCGCCGCCCCCGCGGCTGCAGGAGGCGACGGCGCACTTGCGCCCGCTGGCCGCGCCCTCCGGCCCGCACCCCTCCACGCCGCAGGCGCTGGTGGACGCCCTCGCTGAGAGGTTGCAAGAGTTGGAGACGGATCGCGAGAGCACTCTGGCTAAGAGGGAGTCGTGGCAGGAGCggctggcggcggcggcggcgacgcGGCAGGAGCGCGCGGCGCGCACGGGCGCGCTCGACGCGGCCTACCGGCGCGCGCAGGCCGCGCGCGGCTTCCTCACCGACCTCATCGAGTGCCTAGATGAAAAGCTACCGGCGCTGGAGGCGCTGGAGGTGCGCGCGCTGGCGCTACACCGCCGCCGCTGCTCGTTCCTCACGGAGCGGCGCCGCGCCGACGTGCAGGACCAGGCGCTCGACACACTCGCCTCAGGTCGCGCGGGCAAGGCGGTGGATTCGGAGGAGAAGATCCGGCGCACAGCGGAGCGCgaggggcggcggcgcgcgcggcggctcCGGCgcgaggcggcggcggcggccggcgcgccgccgcctcgctCGCACCGCGATGGCGACTCCAGCGACGACGACCTGCCGCCCAGCGAGGAACACTACTACCGACAGGAGAAAGAGAGCATACGCGCGGCAGCGGCGGGTGTGTTCGCGGACGCGCTGCCGGCGTGGCGCAGCGCGCGCGGCGTGTGCGCGCGGCTGGCGCGCTGGCGGCGCCGCGACCCCGCGCTTTACGCGGACGCCTACGTGCCCGACTGCCTGCCCAAGCTGCTCGCGCCGTATGTGCGCCACCAGCTTATTCTGTGGAATCCACTTGCAGACGAAGACAACGATGATTACGAAAGGATGGATTGGTACAAATGGGTGATGATGTACGGGGTGAGCAACGAGAAGCTGTCGAGCGAGTCGGAGCAGTCGAGCGAGGAGGAGGAGgccggcggtggcggtggcggtggcggtggcggtggcggtggcggtgcggtgagCGAGGCGGGCGTGCGCGGCGACCCAGACCTGCTGCTCGCGCCCGCCGTCGTGTGCGGGGTCGTGCTGCCCAAGCTCGCAGAGCTAGTGGAGTGCGCTTGGGACCCCGTGTGCGTGCGCGCGTGCGTGCGTCTGCGGCAGCTGCTGGTGCGCGTGTGCGCGCTGCCGGGCGCTGCGCCCGCGGCGACGCGCGTGGCGGCGGCAGCGCGCGCCTGCCTGCAGCGCGCGCTGCACGCCGACGTGTTCCTGCCGCCGTTACCGCTCAACCAGAGTCTGGAGGGCGGTCACGGCGCGTTCTGGCGGCGCTGCCTCGGCGCCGGCGTGCGGCTGCTGCGCGCCGCGCTGGCACtcaccgcgccgccgccgctgctgcGCGCAGACGATGTCGCGCTCTCACTCATTGAGACGCTCAGCACGGGCGCGGGCGCATGCGCGGgcccggcggcggcggcggcggcggccgcgctgGCCGAGACGCtcccgcgcggcgcgggcgagctgcgcgcgcgcgcgctgcgccgCCTCGCGCGCCTCGCCGCGCTCGCGCTCGACCGCCTCGACCAGGCCAACCCGCTGCACATGAAAGCAGTGGAACAAGCCAAAGCAGTGATGGCCGAGGCCCGGGCGGTGGAGTGA
- Protein Sequence
- MKAREHGDVIPLAEAAQGSRLQRDDGSGDDDEEGRIHVRGLDLPTDKPKRGTAAASADSELDSEGEEWAAQQLYKARVALADPADVNKLCCDSPESAEAQLNPFAVAPPPPRLQEAPAHLRPLAAPSGPHPSTPQALVDALTERRRRRTCARWPRPPARTPPRRRRWWTPSLRGESILFAVAPPPPRLQEAPAHLRPLAAPSGPHPSTPQALVDALTERRWWTPSLRGESILFAVAPPPPRLQEAPAHLRPLAAPSGPHPSTPQALVDALTERRWWTPSLRGESILFAVAPPPPRLQEAPAHLRPLAAPSGPHPSTPQALVDALTERRWWTPSLRGESILFAVAPPPPRLQEAPAHLRPLAAPSGPHPSTPQALVDALTERRWWTPSLRGESILFAVAPPPPRLQEAPAHLRPLAAPSGPHPSTPQALVDALTERRWWTPSLRGESILFAVAPPPPRLQEAPAHLRPLAAPSGPHPSTPQALVDALTERRWWTPSLRGESILFAVAPPPPRLQEAPAHLRPLAAPSGPHPSTPQALVDALTERRWWTPSLRGESILFAVAPPPPRLQEAPAHLRPLAAPSGPHPSTPQALVDALTERRWWTPSLRGESILFAVAPPPPRLQEAPAHLRPLAAPSGPHPSTPQALVDALTGRRWWTPSLGGESILFAVAPPPPRLQEAPAHLRPLAAPSGPHPSTPQALVDALTERRWWTPSLRGESILFAVAPPPPRLQEAPAHLRPLAAPSGPHPSTPQALVDALTERRWWTPSLRGESILFAVAPPPPRLQEAPAHLRPLAAPSGPHPSTPQALVDALTERRWWTPSLGGESILFAVAPPPPRLQEAPAHLRPLAAPSGPHPSTPQALVDALTERRWWTPSLGGESILFAVAPPPPRLQEATAHLRPLAAPSGPHPSTPQALVDALAERLQELETDRESTLAKRESWQERLAAAAATRQERAARTGALDAAYRRAQAARGFLTDLIECLDEKLPALEALEVRALALHRRRCSFLTERRRADVQDQALDTLASGRAGKAVDSEEKIRRTAEREGRRRARRLRREAAAAAGAPPPRSHRDGDSSDDDLPPSEEHYYRQEKESIRAAAAGVFADALPAWRSARGVCARLARWRRRDPALYADAYVPDCLPKLLAPYVRHQLILWNPLADEDNDDYERMDWYKWVMMYGVSNEKLSSESEQSSEEEEAGGGGGGGGGGGGGGAVSEAGVRGDPDLLLAPAVVCGVVLPKLAELVECAWDPVCVRACVRLRQLLVRVCALPGAAPAATRVAAAARACLQRALHADVFLPPLPLNQSLEGGHGAFWRRCLGAGVRLLRAALALTAPPPLLRADDVALSLIETLSTGAGACAGPAAAAAAAALAETLPRGAGELRARALRRLARLAALALDRLDQANPLHMKAVEQAKAVMAEARAVE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -