Basic Information

Insect: Epinotia bilunana
Gene Symbol: -
Assembly: GCA_947049265.1
Location: CAMRIQ010000539.1:72384-88472[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0022 0.18 13.4 6.3 1 23 351 373 351 373 0.98

2 11 0.046 3.8 9.3 0.2 2 23 381 403 381 403 0.94

3 11 4.2 3.4e+02 3.1 2.1 1 23 407 429 407 429 0.94

4 11 0.0057 0.46 12.1 0.0 3 22 463 482 461 484 0.87

5 11 0.075 6.1 8.6 0.4 1 22 496 517 496 521 0.93

6 11 0.0035 0.28 12.8 0.1 2 23 540 562 540 562 0.94

7 11 0.24 19 7.0 3.2 2 23 581 603 580 603 0.96

8 11 0.00042 0.034 15.7 0.5 2 23 617 638 617 638 0.97

9 11 0.35 29 6.5 0.2 2 23 644 665 643 665 0.91

10 11 0.00025 0.021 16.4 1.7 1 23 671 693 671 693 0.97

11 11 2.3e-06 0.00019 22.8 0.8 1 23 699 722 699 722 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0022	0.18	13.4	6.3	1	23	351	373	351	373	0.98
2	11	0.046	3.8	9.3	0.2	2	23	381	403	381	403	0.94
3	11	4.2	3.4e+02	3.1	2.1	1	23	407	429	407	429	0.94
4	11	0.0057	0.46	12.1	0.0	3	22	463	482	461	484	0.87
5	11	0.075	6.1	8.6	0.4	1	22	496	517	496	521	0.93
6	11	0.0035	0.28	12.8	0.1	2	23	540	562	540	562	0.94
7	11	0.24	19	7.0	3.2	2	23	581	603	580	603	0.96
8	11	0.00042	0.034	15.7	0.5	2	23	617	638	617	638	0.97
9	11	0.35	29	6.5	0.2	2	23	644	665	643	665	0.91
10	11	0.00025	0.021	16.4	1.7	1	23	671	693	671	693	0.97
11	11	2.3e-06	0.00019	22.8	0.8	1	23	699	722	699	722	0.98

Sequence Information

Coding Sequence: ATGGTGGCGTACTGTTGTGTAAAAGGTTGCAATAACAACAGCAGCAATAAAAAGAAAGACCCTGATGATATGACATCGTTTCACGCcTTTCCATCAAATGTAGAAATGAAACAAAAGTGGCTGAAAGCTATTGGGAGACCAGACTGGACACCGCCAAGCTATGCCCGCATATGTAGTGCACATTTCAGCTATGAACAGATAAACCATGACGGGAGGAGGATAAGGATTAAAGATGATGCGGTTCCTATAAAAGATTTGCCTGCCAACTCCAACTTCGAAGCATCAGATGTAGAGGTGTGTAGATTCTGCCTGGCTGTGGAGGTGCGCTTGCACAGCCTTCAGGATGGTGTCTACAAGGTGTACATGGAGTCCTTAGTGGGGTACAATgaaaaCTACCATATAGAAGGTCTTCCACAGTTTGTTTGCTACGAGTGTGCAGCTCATCTCAAGAAATGCTACAAACTATTAGAAAGGAGTCTAACTGTGCAAGCAACATTACTCGATATTTTTGCACAATATGGCAAGattacAATAAGTCTTATCAATGCAAAAAATAGAAAGCTGCTTAATTTGTCATCAACTTTCACTACACATGAGATTAAGAcaatttatgaatttaaatacaaTGGCAGCTTGGAAAACAATGAACTTAATGTTATTGAAAATGACAATAAACAGAGAACTATGGACAATTACATTAGCATACCAAAATTGCACAGTGATGAAGATATAGACTTAAAGGATGATGACAGATCTGATATGTTTGATGATAGACTCAGCATTTCTGCAGATATCAGTTCAGAAGACGAAGTTACGGCCGAAACTGAGAATGCTGTACTTAAGCATGATTCTGAAGACAATCCGAAGTACAGATGGCAGGAAACTAAACCAAAAAAAGTGAAAAGGTCAATCAAATCAAGTGATCATGCGGGACTGACTCCTGATGAAGTCAATATGCAGGAATATTTTAATGTTGTCCGATTAACGttagaaCAACAAATAGAAAATTGGAACAAAACAAAAGAGACGAAGGAATTTAGCGGAGAGTCATTCAAATGCCAAACATGTTCAAAGATGTTTGCTCATCACAATAGCTATAAAGTGCACATACAAAGTCACGATTCCaGTCGGGGGAGCGCGGAATGTCCTGTGTGCAAGCTGCGCTTTAAGAACGAGGTTCTGGCACGCTCACATGCTAACCGCGCGCATGCTAAGAAATTCTTTTGCAAATTGTGCATGAAGGCTTTCAACAATGTTGGTGTAGCAAAGAAGCACCACAAATGGCACATGGGCTACAAATACGCGTGCGGGTCCTGCGCGTTCACGTCCTTGCACGCGTCGGCGCTgggcgcgcacgcgcgcgcgcggcacggcggcgcgctggcctgcgcgcgctgcggccgCGCCTTCCGCAGCCAGAGGGGGCTGCGGCTGCACGCGGCCGCCGCGCACGGCCAGGCCAAGGATTCTAAAGACAATCCGAAGTACAGGTGTCAGCAATGCAATCTCAACTTCGAGTCCGAAGGTGCGAGGCGAGTCCATATTCTCACGTCCAAGCAACACAAGATAGAGACCAATCTGTGTGACCCGACACCACAAGACCAGAGACTCAAGAACACGTGTAAGAAGTGTGGTATAGAGTTCCCGACACTCAAGGCACTCATAGAGCACGGCAGAGCAGAACACAGACGGATCAAGAAGAAGACTAGTTGGAGGCTGCCTGACGACTCTTATCCGACACAGTGTGACCATTGTGAGACAACAGTGGCGAATCGCTCAGAGCACTGGCGGCACGTGCGCCGGCAGCACCCCGCGCAACGCGCCGCTTACCGCCCCGTCATCACCGCCGTCTGCGATACTTGCGGAAAAGGCTTCCAGAATTCAACAAAGCTTCAACTGCACGTCCTCCGGCACGGGCCCCCGCGCGTCccctgcgcgcgctgcgcgcTCGTGTTCCACGACAAgcacgcgctcgcgcgccacgccgccgcgcacgcgcccgcgcgcccgcaccgctgcgcgcgctgcccaAGCGCCTTCAAGCAGAAGTCGAACCTGGACCGCCATGAGAGGGTACACACTGGTGTAACCCCATACGAGTGCCCGATGTGCGGCAAAAAGTTCAAATACTCTACCAGCATGAACCTGCACGTGCGGACCGTGCATTACAAGCTGCCGCACCCCCCGAGAAAGAGAAAGAGTAAGAAATTGGATGAAAGCGATGTTAGTTTTAAGAAATAA
Protein Sequence: MVAYCCVKGCNNNSSNKKKDPDDMTSFHAFPSNVEMKQKWLKAIGRPDWTPPSYARICSAHFSYEQINHDGRRIRIKDDAVPIKDLPANSNFEASDVEVCRFCLAVEVRLHSLQDGVYKVYMESLVGYNENYHIEGLPQFVCYECAAHLKKCYKLLERSLTVQATLLDIFAQYGKITISLINAKNRKLLNLSSTFTTHEIKTIYEFKYNGSLENNELNVIENDNKQRTMDNYISIPKLHSDEDIDLKDDDRSDMFDDRLSISADISSEDEVTAETENAVLKHDSEDNPKYRWQETKPKKVKRSIKSSDHAGLTPDEVNMQEYFNVVRLTLEQQIENWNKTKETKEFSGESFKCQTCSKMFAHHNSYKVHIQSHDSSRGSAECPVCKLRFKNEVLARSHANRAHAKKFFCKLCMKAFNNVGVAKKHHKWHMGYKYACGSCAFTSLHASALGAHARARHGGALACARCGRAFRSQRGLRLHAAAAHGQAKDSKDNPKYRCQQCNLNFESEGARRVHILTSKQHKIETNLCDPTPQDQRLKNTCKKCGIEFPTLKALIEHGRAEHRRIKKKTSWRLPDDSYPTQCDHCETTVANRSEHWRHVRRQHPAQRAAYRPVITAVCDTCGKGFQNSTKLQLHVLRHGPPRVPCARCALVFHDKHALARHAAAHAPARPHRCARCPSAFKQKSNLDRHERVHTGVTPYECPMCGKKFKYSTSMNLHVRTVHYKLPHPPRKRKSKKLDESDVSFKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00657268;
90% Identity: iTF_00656203; iTF_00660377; iTF_00660695;
80% Identity: iTF_00656203;