Ebil012682.1
Basic Information
- Insect
- Epinotia bilunana
- Gene Symbol
- -
- Assembly
- GCA_947049265.1
- Location
- CAMRIQ010000121.1:360864-378949[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.024 2 10.2 3.0 1 23 294 316 294 316 0.96 2 12 0.0011 0.085 14.5 0.4 2 23 324 345 323 345 0.94 3 12 0.12 9.8 8.0 0.8 1 23 349 371 349 371 0.97 4 12 0.0016 0.13 13.9 0.9 1 23 376 399 376 399 0.98 5 12 0.014 1.2 10.9 0.1 1 23 403 426 403 426 0.94 6 12 0.0027 0.22 13.1 0.1 2 21 442 461 442 466 0.92 7 12 0.38 31 6.4 0.2 3 23 476 497 476 497 0.93 8 12 0.44 35 6.2 0.2 3 23 517 538 516 538 0.96 9 12 1.3e-05 0.0011 20.4 0.5 1 23 549 571 549 571 0.98 10 12 3.8e-05 0.0031 19.0 2.7 1 23 577 599 577 599 0.99 11 12 0.014 1.1 10.9 2.7 1 23 605 627 605 627 0.98 12 12 6.6e-05 0.0054 18.2 0.2 1 23 633 656 633 656 0.98
Sequence Information
- Coding Sequence
- ATGGAAGATGTGAAAGTGTGTCGGATATGCCTTGTTATGGGTGTTAAGATGCACAACTTGCATTCTTACCCTTTGTATGGCTACTTTGAATCACTTACTGGGATCAACCCACTGAGCATGATGGAGCTTCCTCCGTATGGTTGTTATGAATGCACTGCTGTAATGAAGAAGCTATATCACTTCAAGGAAAAATGTCTCATTGGCCAGGCTGAGCTGTATGCTATGCTACAGGCTACGGGGAAGATCACAGCCAATGCTTTAAACAGCATCAACCGCCAGCAACTAAAGCTAGCATCAAACCTAACCATATACCGTGACAATAACATATTATCCCTCATCCACAATGAGAAAGTAGAAATTAAATTGGAATCACCTAAGCCAGATACTGATAATTATCTCATAGAAGTAGACTGTATCAAACAGGAGGGCTATGATGATTTTCCAACTAACATGTCAAGTGACGATGATGAGCCACTGGCTGTACGGAAGAGTGTAAAAGAgaaaaagaagtctcagaagaAGGGAAAGAGAAGGAAGAAGAAAGAAGGTAGCTTGGATTGTAATGGAGATTTGCAGCATGTGGAGCCAATTGACATACCAACAGCACCAGATTCCGATTTCTCGGAGATCCCAGACAACACAGGGGCCTCAGAAGTCCCCGAGGTGGAGGTCCCGAAAAAGAAGCGCGGCCGGCCGCGGCTGACGGAGGCCAAAGAGGCGAAAGAGGCCACGAAGACACGCCGTACCCGGAATACCGGGGGAGTGGGGGTGGATGACATTGATCTGGAGGAATATGTCACTattgtcaagttgacaACAGAAGAGCAGTTAGCAGAGATAAATAAGCGGCAGCAGTCCTCGAACTACCTGAACGCGCCGTTCCAGTGCAACCTGTGCTATAAGGGCTTCATAGACACGCACGCCTGGAAGCACCACGTGGGCAAACACGATCCGAGTGCGGGCGAGGTGGAGTGCGGTATCTGCAAGTTCCGCTTCCGCTCCCGGCGCGCGCTGCAGAAACACGCGGCCAACCATGAGAAGAAGTATGCCTGTCGGTCCTGTCCATACGTGTCTAAAACGACAACGCAAGCGAAGCAGCATCAGAGATGGCACAAAGGAGTTACATACAAATGCCAGTACTGCGACGAGATATCCACTAAATGGACGTCCTACCTGAGCCACGTGCGTATCAAGCATCCCTCGGAATTCATTTGCGGTGTGTGCGGATACTCCTACGTCAGTAAACTGGGGCTGGCCATGCATAAGACCATGATGCATAAAGACTATGTGGAAAAGACTGAACCGGACGGTGACAAGGGCCCGTACTGCCCGGATTGCGACGTGCAGTTCGTGACCGAAGAAGCTTGGAAACGGCACATGGTCACCTCAGCAAAGCACGCGCCGACTAATGACTTCAAGAACGGGTGCCGCGCGTGCGGCAGCGTGTTCGCGACGGGCGAGGAGCTGCGCCTGCAccaccgcgccgcgcacgcgcgccgccgccccaaGAACTACGGCAAGAAGCGCGCGCAGCCCTGGCCCGCGCCCTGCGAACACTGCTCGGAGGAGATCCCGAACGCACGCGAATACTGGACGCACTTCCGACGAGCGCACCCAGACAAGCCGTACCCCATACAGAAGAACTACATCTGTGATATCTGCGGAAAAAGCTTCAGAGGCAACGCGTTCCTAGTATACCACAAGCGCACACACTTCGAGGAACGCGCATACAAATGCGCGCAGTGTCCCAAGGCGTTCCACAACCGGACCAACCTGCAGATGCACGAGAAGACACACTCTGACGCGAGACCATATCCGTGTACTGTGTGCTTCAAGGCTTTCAAGTGTAAGGGTGCTCTAGATCGGCATTTTAGGAGCCACACTGGCGTGAAACCATACGAGTGCGAAGTCTGCGGTAAAGCGTTCGGACAGTCCAACAGCAGGAAGCTCCACGTCCGGACAGTGCATCTCCGTCAGCCCGCGCCCTACGTCAGCCGCGCTAGGAAGAGACGACCGCCGCTTGAATAG
- Protein Sequence
- MEDVKVCRICLVMGVKMHNLHSYPLYGYFESLTGINPLSMMELPPYGCYECTAVMKKLYHFKEKCLIGQAELYAMLQATGKITANALNSINRQQLKLASNLTIYRDNNILSLIHNEKVEIKLESPKPDTDNYLIEVDCIKQEGYDDFPTNMSSDDDEPLAVRKSVKEKKKSQKKGKRRKKKEGSLDCNGDLQHVEPIDIPTAPDSDFSEIPDNTGASEVPEVEVPKKKRGRPRLTEAKEAKEATKTRRTRNTGGVGVDDIDLEEYVTIVKLTTEEQLAEINKRQQSSNYLNAPFQCNLCYKGFIDTHAWKHHVGKHDPSAGEVECGICKFRFRSRRALQKHAANHEKKYACRSCPYVSKTTTQAKQHQRWHKGVTYKCQYCDEISTKWTSYLSHVRIKHPSEFICGVCGYSYVSKLGLAMHKTMMHKDYVEKTEPDGDKGPYCPDCDVQFVTEEAWKRHMVTSAKHAPTNDFKNGCRACGSVFATGEELRLHHRAAHARRRPKNYGKKRAQPWPAPCEHCSEEIPNAREYWTHFRRAHPDKPYPIQKNYICDICGKSFRGNAFLVYHKRTHFEERAYKCAQCPKAFHNRTNLQMHEKTHSDARPYPCTVCFKAFKCKGALDRHFRSHTGVKPYECEVCGKAFGQSNSRKLHVRTVHLRQPAPYVSRARKRRPPLE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00410638;
- 90% Identity
- iTF_00660593; iTF_00658764; iTF_00654620; iTF_00289967;
- 80% Identity
- -