Basic Information

Insect: Epinotia bilunana
Gene Symbol: -
Assembly: GCA_947049265.1
Location: CAMRIQ010000481.1:258551-266127[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 6e-05 0.0049 18.4 0.1 1 23 182 205 182 205 0.96

2 12 0.042 3.4 9.4 4.1 1 23 209 231 209 232 0.95

3 12 0.022 1.8 10.3 0.1 1 23 238 261 238 261 0.95

4 12 0.00087 0.07 14.7 3.5 1 23 267 289 267 289 0.99

5 12 0.0019 0.15 13.7 0.4 2 23 297 319 296 319 0.96

6 12 2e-06 0.00016 23.0 1.7 1 23 325 347 325 347 0.98

7 12 0.00011 0.0092 17.5 0.2 1 23 353 375 353 375 0.98

8 12 1.3e-05 0.001 20.5 1.6 1 23 380 402 380 402 0.99

9 12 3.3e-05 0.0027 19.2 2.9 1 23 408 430 408 430 0.96

10 12 2e-05 0.0016 19.9 2.8 1 23 436 459 436 459 0.96

11 12 0.00018 0.015 16.9 1.4 1 23 493 515 493 515 0.97

12 12 0.00089 0.072 14.7 0.6 1 23 521 544 521 544 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	6e-05	0.0049	18.4	0.1	1	23	182	205	182	205	0.96
2	12	0.042	3.4	9.4	4.1	1	23	209	231	209	232	0.95
3	12	0.022	1.8	10.3	0.1	1	23	238	261	238	261	0.95
4	12	0.00087	0.07	14.7	3.5	1	23	267	289	267	289	0.99
5	12	0.0019	0.15	13.7	0.4	2	23	297	319	296	319	0.96
6	12	2e-06	0.00016	23.0	1.7	1	23	325	347	325	347	0.98
7	12	0.00011	0.0092	17.5	0.2	1	23	353	375	353	375	0.98
8	12	1.3e-05	0.001	20.5	1.6	1	23	380	402	380	402	0.99
9	12	3.3e-05	0.0027	19.2	2.9	1	23	408	430	408	430	0.96
10	12	2e-05	0.0016	19.9	2.8	1	23	436	459	436	459	0.96
11	12	0.00018	0.015	16.9	1.4	1	23	493	515	493	515	0.97
12	12	0.00089	0.072	14.7	0.6	1	23	521	544	521	544	0.97

Sequence Information

Coding Sequence: ATGACGGAAATTTGGAGTTTGGACGCTCTCTGTCGATGCTGTCACGCAGATGGCGACTTTAAAGATTTACGAGCGATGTATGTTTCTGATAACGGTCCTGAAAATTATCTAGGCATGTTACTAGAAACCTTGGGAGTTACGATAAAACCTCCTCCTGTAAATGCCAGCTATTCCATCTGCGATGCATGCATACTCCAGCTCCGAAGCGCGACCAATTTCAAGAAATTGGTACTTGATTGTGAGACCAAGTTTGAGGAGTACTGTAAAAatGAATTGTCACAAAATTATGATATTAAAACAGAGCCAGAATATTTAGatGATCCTGATGATAATGACCAtaTATTCAACGTCGACATTAAAAAGCCTGTGAAGAATATTAAAAAGGAAGCCGATAACCACATCGAGATCACTATAGACGTGAAGCCGACGATAGAGGGCAAGTCGGCGAAGAAGAAACACAAACCTATCAAAGTTAAATCAAAAAGCAAACCAAAAGAAGAAGAATCCTTAGTAGTCACAGTGAAAACGGAATCTGGTGAGCTGTATTCTTGCAAAAACTGCGGCGTCAGCTACGACACTCTAGACGAACTCAACCAACACATAAACGAGGAACATTTCACAGGATTCAAATGCATGTACTGCCCCGAACAGTTTAAAACCGAGAATAGGTATAAGATCCATAATCGCCTGCACCATAACGACACGAGACCGTTCCCGTGCGAGCATTGCGGGAAAAAGCTGGCCGCGAGACTGAGCCTTGTCGAGCACGTCAACTCAGTACACACTAAGGAGGTCTATTACCAATGcgatttatgtttaaaaaagtttcACAACAAGCAAGTCTTGAGGATACATATTCGGAAGCATGACGGTACTTTTAGGAAATTAATTTGTGAGCAGTGCGGGGTAGGTTGCAATGACCGCACTAACTTAAGGTACCATGTCATGACAGTTCATGATAAATTGAGGCTATTTAACTGTGAAGAATGTGGCAAAAAATTCTCAGCGGCGAAGCATTTGAAGGTACATTTGAGGTCCCATACTGGTGAACGGCCTTTCGAGTGTGATATCTGTTCCAACGCCTTCGCTTCCAAAGACACCTTGACTGTGCATAAAAAGATACATGATAACAGCGGATACAAATGCAAGACTTGCGGAAAAGACTTCCCTACGAGAGGTCTATACGCTTCACATTACAGAAAGCACGTCAGCACTAAGCCATTTAAATGCCATTTGTGCAACAAAGAATTTGCTGGGAAGTATTCTTTGAATCGGCACATTTTTGAGCACACGGGAGAGCGGCCGTTCAACTGTAGTTTGTGCGGTAAGGATTTCAAACAGAAGACGCAGCTAGTCAGACATAATAGGCGTTTCCACGACCCGAATAAACCAGAAGTAGTCAAAGAAAAGTGTGATTTGTGTAAAAGAAATGTTCCTAATATAGAGAAGCATATGAGGGCTCACTCTAATAAGCCTTTTGCGTGCCATTTGTGTGAGAAGCGGTATCCTGAACAGAACGCTTTAAACAGGCATTTACAAAGACATACAGGAATCAAGCCCCATCAATGTGAATTGTGTGATAAAGGATATATTCAGTTGAAGAGCCTTAGAGGGCATGTAATGAAAGTACATAAATTACCGCTAAAGACCGAGCAGGAAGATCATTACGACAGTGTTGTTACCACGTACACGATTCAGAATTTGAAAAGGAAGTGA
Protein Sequence: MTEIWSLDALCRCCHADGDFKDLRAMYVSDNGPENYLGMLLETLGVTIKPPPVNASYSICDACILQLRSATNFKKLVLDCETKFEEYCKNELSQNYDIKTEPEYLDDPDDNDHIFNVDIKKPVKNIKKEADNHIEITIDVKPTIEGKSAKKKHKPIKVKSKSKPKEEESLVVTVKTESGELYSCKNCGVSYDTLDELNQHINEEHFTGFKCMYCPEQFKTENRYKIHNRLHHNDTRPFPCEHCGKKLAARLSLVEHVNSVHTKEVYYQCDLCLKKFHNKQVLRIHIRKHDGTFRKLICEQCGVGCNDRTNLRYHVMTVHDKLRLFNCEECGKKFSAAKHLKVHLRSHTGERPFECDICSNAFASKDTLTVHKKIHDNSGYKCKTCGKDFPTRGLYASHYRKHVSTKPFKCHLCNKEFAGKYSLNRHIFEHTGERPFNCSLCGKDFKQKTQLVRHNRRFHDPNKPEVVKEKCDLCKRNVPNIEKHMRAHSNKPFACHLCEKRYPEQNALNRHLQRHTGIKPHQCELCDKGYIQLKSLRGHVMKVHKLPLKTEQEDHYDSVVTTYTIQNLKRK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00659643;
90% Identity: iTF_00658689; iTF_00660538; iTF_00657531;
80% Identity: -