Basic Information

Insect: Epinotia bilunana
Gene Symbol: -
Assembly: GCA_947049265.1
Location: CAMRIQ010000350.1:1004168-1013930[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 4.8e-05 0.0039 18.7 7.7 1 23 166 188 166 188 0.98

2 15 8.3e-06 0.00067 21.1 4.5 1 23 194 216 194 216 0.97

3 15 0.017 1.4 10.6 4.7 1 23 222 244 222 244 0.98

4 15 1.9e-05 0.0015 19.9 1.7 1 23 250 272 250 272 0.98

5 15 3.1e-05 0.0025 19.3 5.9 1 23 308 330 308 330 0.97

6 15 0.00083 0.067 14.8 4.7 1 23 334 356 334 356 0.98

7 15 3.2e-05 0.0026 19.2 1.3 1 23 363 385 363 385 0.98

8 15 0.0042 0.34 12.6 5.1 1 23 391 413 391 413 0.97

9 15 2.4e-06 0.00019 22.8 0.3 1 23 419 441 419 441 0.98

10 15 3.7e-05 0.003 19.0 7.2 1 23 448 470 448 470 0.97

11 15 4e-06 0.00033 22.1 4.2 1 23 476 498 476 498 0.98

12 15 3.7e-05 0.003 19.0 0.5 1 23 504 526 504 526 0.98

13 15 6.5e-06 0.00053 21.4 3.9 1 23 532 554 532 554 0.97

14 15 0.00032 0.026 16.1 1.0 1 23 560 582 560 582 0.97

15 15 0.00035 0.029 15.9 5.4 1 21 588 608 588 611 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	4.8e-05	0.0039	18.7	7.7	1	23	166	188	166	188	0.98
2	15	8.3e-06	0.00067	21.1	4.5	1	23	194	216	194	216	0.97
3	15	0.017	1.4	10.6	4.7	1	23	222	244	222	244	0.98
4	15	1.9e-05	0.0015	19.9	1.7	1	23	250	272	250	272	0.98
5	15	3.1e-05	0.0025	19.3	5.9	1	23	308	330	308	330	0.97
6	15	0.00083	0.067	14.8	4.7	1	23	334	356	334	356	0.98
7	15	3.2e-05	0.0026	19.2	1.3	1	23	363	385	363	385	0.98
8	15	0.0042	0.34	12.6	5.1	1	23	391	413	391	413	0.97
9	15	2.4e-06	0.00019	22.8	0.3	1	23	419	441	419	441	0.98
10	15	3.7e-05	0.003	19.0	7.2	1	23	448	470	448	470	0.97
11	15	4e-06	0.00033	22.1	4.2	1	23	476	498	476	498	0.98
12	15	3.7e-05	0.003	19.0	0.5	1	23	504	526	504	526	0.98
13	15	6.5e-06	0.00053	21.4	3.9	1	23	532	554	532	554	0.97
14	15	0.00032	0.026	16.1	1.0	1	23	560	582	560	582	0.97
15	15	0.00035	0.029	15.9	5.4	1	21	588	608	588	611	0.95

Sequence Information

Coding Sequence: ATGGACGCGCTGCATTCGTGCCGCTGCTGCCTGCTGCGCCCTCCGGACAAGGGCCTCGACACGCTGTACACACATCACAGCAAACCGGAGATATATTCAGACATGCTGAGAGAATGCTTCGATATACATCTAAATTCAGCAAATGGCGAGTGCGGTATCTGCGAGGTGTGCGTGGGCCGGCTGCGGGACGCGAGCAACTTTAAGCTGCAAGTGCAGCGCAGCCAGGCGGAGCTGCTTTCACTGATGCAGAGACCTGTAAAAACCAAAGATGACAAGGCACCCAAACCCGATGCGGACACTAAGCACCGGCAACTCCAACTTGAGCTGGATAAAGCCTATGGAGATGGAGATGAAACTGCAATGTGTGAAATCAAGATGGAGAAGTCGTCAGTCGTAGAGTCGAGCGACGAGGAGAATGAACCACTGGCAACGTACAGCACACCGCAGGCGGCGACACAGAAGgaccccgccccgccccgcggCACGGGCGTCGTCCACACCTGCAAGATATGCCAGAAATCATTCGACCACCATTCCGCGCTCAAAAATCACCAGCGTCTTCACACAGGAGAAAAACCATTCTCCTGCAATGTCTGCCACAAGAGATTCTCGCAAAAAGGCAACCTGACCGCTCATTTCAAATACCACATGGGGGATTATCGGTACTTCTGCGAAATATGCAAGAAGAGGTTTACGGAGAAGTGTATCATGGTTAAACACATGAAAACGCACACTGGAGAAAAATCTCACACGTGCGAATTATGCGATAAAAAGTTTGCACTAAAAAGTTATTTAGCCGTTCATTTGAAAACCCatttgaaatatgaaaataataaagaacAACCAGAAGAAACCGAAAGCGACGAGGTCTCGAAAGAAGACTTGAATACTAATTCAAAAGACGAGACAGAAGAATCGTTTCACGAGTGCAAAGTATGCAAGAAACGGTTTGCGCAGAAGTGCAACTTGACTGCTCATTTGCGATATCATACGCCCCGGTTCTCTTGCGATCAGTGCGACAGGAAATTTGTATGTAAGTCTCACTTGAATGCCCACATACTTCGGCATGCGGGAGGGGAGGCCGTGTACCCGTGTGACGTATGCAATAAACAGTATAAATCGAAACGTTCCCTGAACCTGCATTTGACAACTCACACGGGAGATTATAAATACTCGTGCAATGTGTGCAATAAACAATTCGTACATAAAGACACACACACGCGACACATGCTTGAGCATACAGGAGAAAAACCGTACGCTTGTGATACATGCAATAAGGCGTTCCCGCTGAAATCCGCTTTAAACCAACACATGCAAACACATACTGGCGGCGAAAAACTATTTTGCTGCGAAATCTGTAATAAACGGTTCTCACACAAGAATTACTTATCTAAACACATGGATACTCACATGGGGAAGAAACCATTCATGTGCGAAATATGTAGTAAAACATTTACTCATAAAAGCACACTAAAGGCTCACAAATCGACGCACACTGGAGAAAAACCCTACTCCTGTGAAATATGCCAAAAGCGATTCCGACTGAGCCGAGGACTGAGGGGCCACATGATGATCCACGACGGAGTCAAACAACACATCTGCGACGTGTGCAGTAAGCAATTTAGACATAAATCCGCTTTAATGGTCCACATGCGACGACACACGGGACAAAAACCACACTCTTGTGATGTCTGTAAAAAGGAATTTATAGTTTTAGCTGAATTAAAAATGCACTATCGTAGTCATACTGGAGAGAAACCGTATGTGTGTCAAATTTGTCATAAGAAGTTCTCACGACCTGGTCACATCAGAAAACATCTTAAATGCGTTCATAATGAGAAACCTTCGAAATATATTGTACTGTAA
Protein Sequence: MDALHSCRCCLLRPPDKGLDTLYTHHSKPEIYSDMLRECFDIHLNSANGECGICEVCVGRLRDASNFKLQVQRSQAELLSLMQRPVKTKDDKAPKPDADTKHRQLQLELDKAYGDGDETAMCEIKMEKSSVVESSDEENEPLATYSTPQAATQKDPAPPRGTGVVHTCKICQKSFDHHSALKNHQRLHTGEKPFSCNVCHKRFSQKGNLTAHFKYHMGDYRYFCEICKKRFTEKCIMVKHMKTHTGEKSHTCELCDKKFALKSYLAVHLKTHLKYENNKEQPEETESDEVSKEDLNTNSKDETEESFHECKVCKKRFAQKCNLTAHLRYHTPRFSCDQCDRKFVCKSHLNAHILRHAGGEAVYPCDVCNKQYKSKRSLNLHLTTHTGDYKYSCNVCNKQFVHKDTHTRHMLEHTGEKPYACDTCNKAFPLKSALNQHMQTHTGGEKLFCCEICNKRFSHKNYLSKHMDTHMGKKPFMCEICSKTFTHKSTLKAHKSTHTGEKPYSCEICQKRFRLSRGLRGHMMIHDGVKQHICDVCSKQFRHKSALMVHMRRHTGQKPHSCDVCKKEFIVLAELKMHYRSHTGEKPYVCQICHKKFSRPGHIRKHLKCVHNEKPSKYIVL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01072780;
90% Identity: iTF_00658658;
80% Identity: -