Basic Information

Insect: Epinotia bilunana
Gene Symbol: -
Assembly: GCA_947049265.1
Location: CAMRIQ010000512.1:115760-129975[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2.1e-06 0.00017 22.9 0.2 2 23 128 149 127 149 0.96

2 13 1.1e-05 0.00091 20.6 0.8 1 23 155 177 155 177 0.96

3 13 2.8e-05 0.0023 19.4 3.0 1 23 183 205 183 205 0.98

4 13 9.6e-05 0.0078 17.7 1.5 1 23 211 233 211 233 0.97

5 13 2.7e-06 0.00022 22.6 1.4 1 23 246 268 246 268 0.97

6 13 3.6e-06 0.00029 22.2 0.7 1 23 274 296 274 296 0.96

7 13 0.0001 0.0084 17.6 2.4 1 23 302 324 302 324 0.97

8 13 1.8e-05 0.0014 20.0 0.8 1 23 330 352 330 352 0.97

9 13 2.3e-06 0.00019 22.8 0.7 1 23 358 380 358 380 0.98

10 13 1.4e-05 0.0011 20.3 3.6 1 23 386 408 386 408 0.98

11 13 5.8e-07 4.7e-05 24.7 0.6 1 23 414 436 414 436 0.98

12 13 6.3e-06 0.00051 21.5 2.4 1 23 442 464 442 464 0.98

13 13 7.7e-07 6.2e-05 24.3 0.7 1 23 470 493 470 493 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2.1e-06	0.00017	22.9	0.2	2	23	128	149	127	149	0.96
2	13	1.1e-05	0.00091	20.6	0.8	1	23	155	177	155	177	0.96
3	13	2.8e-05	0.0023	19.4	3.0	1	23	183	205	183	205	0.98
4	13	9.6e-05	0.0078	17.7	1.5	1	23	211	233	211	233	0.97
5	13	2.7e-06	0.00022	22.6	1.4	1	23	246	268	246	268	0.97
6	13	3.6e-06	0.00029	22.2	0.7	1	23	274	296	274	296	0.96
7	13	0.0001	0.0084	17.6	2.4	1	23	302	324	302	324	0.97
8	13	1.8e-05	0.0014	20.0	0.8	1	23	330	352	330	352	0.97
9	13	2.3e-06	0.00019	22.8	0.7	1	23	358	380	358	380	0.98
10	13	1.4e-05	0.0011	20.3	3.6	1	23	386	408	386	408	0.98
11	13	5.8e-07	4.7e-05	24.7	0.6	1	23	414	436	414	436	0.98
12	13	6.3e-06	0.00051	21.5	2.4	1	23	442	464	442	464	0.98
13	13	7.7e-07	6.2e-05	24.3	0.7	1	23	470	493	470	493	0.96

Sequence Information

Coding Sequence: ATGGACGCTGGCTGGGCGGAGACCGCCGTGAAGGCCGAGGCAGGCGTTGCGGAGCCAGTGCAGTGTCCCGAGGCTGAGGTGGCCCCCGTGAAGGTGGAGGTGGTTGTCAAAAAGGAGCCCGTGGACGCTGGCCCCAGCGTGCCCGGCCTGCAGTCCCTTGAACTGGAGTTTACGGAGCACATCTGCATTAAGGTGGAGGCGGAGTTCGTGGGCGTCAAGGAGGAGCCCGGCAGCGGGGGCGAGCGCGAGAGCGCGGACCCGAGTGAGAGCGAGACGACGCATGCTGCGGATGATGAGCTGGACGACAAGGACCCTATCTCGGCGCGCGCTCTGCCCCTCGCCCCGCCGCCGCGCTCCTCGCGCATCCACGGCGAGCCCGTCTCCTGTGAACTATGTGCTAAAAAGTTCACGCAAGCGAGCAATTTAAAGGCGCACATGCTGATTCACACGGGACAGAGACCGTACGCCTGCAATATATGCGATCAGCGGTTCAGGAAACTGAGCACTCTGAAGAAACACGAACTGATTCACACTGGGGAAAAGCCGTTCCAATGCCGTCAGTGCGACAAGCGGTTCAGGTTGTCGGACACTCTCAAGAAACACGAGCGGCTGCACACAGGAGAAAAACCATACTcctgtaaaatatgtaaaaaagagTACATACAGCTGGTGAGTTTAAGGAGGCATGAACGTTTCCACCCGGAAGAGTACCCCGACGCCACTCCGCTCTTCACGCACCCTTGCCGTATTTGTGAAAAGCAGTTCGAGTCACCAAGTGATCTGAAGAGACATGAACGGACGCACACGGGAGAAAAACCATACCTTTGCAATATATGTAACAAGAGCTTTGCACAAATGGTGACGTTGAGGCAACACCAACGAATTCATACTGGAGAGAAACCGCACTCCTGCAAAATGTGTTCAAAGACGTTCGCAGACTTGAGAACTCTGAAGGACCATGAACGGATACATACTGGCGAAAAACCTTATGCCTGCAATGCGTGCGACAAAACGTTCTCTCGGTTAAATACTTTAAGGAAACATGAACAAATCCATACGGGGGAAAAACGATTTTCATGCAAAGTGTGTCAAAAGCGTTTCAGGCAATCGGGTGCGTTAAACCTGCATGTACGAATCCATACAGGAGAAAAACCATTCACCTGTGAAACGTGTCACAAGGAGTTTGCACGACATGACGCTCTGAAGAAACACGCGCGGATCCACTCAGGAGAGAAACGATACAGCTGTGGAGTGTGTAAAAAAGAGTTCACAGATTCGGGCAACTTGAAGAAACATGAACGCATCCACACCGGTCTAAAACCATACGCATGTGAAACGTGCAAGCGGGAGTTCACAGACCTGAGCCATTTGAAGAAACACGAGCGGATACACACTGGGGAGAAACCGTACACGTGTAAAATCTGTAATAAAGCGTTTGCAGTGTCGAGTACTTTGAAGAAACATCAACAATTAATTCACTCCGGCAAATCAAGCTAa
Protein Sequence: MDAGWAETAVKAEAGVAEPVQCPEAEVAPVKVEVVVKKEPVDAGPSVPGLQSLELEFTEHICIKVEAEFVGVKEEPGSGGERESADPSESETTHAADDELDDKDPISARALPLAPPPRSSRIHGEPVSCELCAKKFTQASNLKAHMLIHTGQRPYACNICDQRFRKLSTLKKHELIHTGEKPFQCRQCDKRFRLSDTLKKHERLHTGEKPYSCKICKKEYIQLVSLRRHERFHPEEYPDATPLFTHPCRICEKQFESPSDLKRHERTHTGEKPYLCNICNKSFAQMVTLRQHQRIHTGEKPHSCKMCSKTFADLRTLKDHERIHTGEKPYACNACDKTFSRLNTLRKHEQIHTGEKRFSCKVCQKRFRQSGALNLHVRIHTGEKPFTCETCHKEFARHDALKKHARIHSGEKRYSCGVCKKEFTDSGNLKKHERIHTGLKPYACETCKREFTDLSHLKKHERIHTGEKPYTCKICNKAFAVSSTLKKHQQLIHSGKSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00658649;
90% Identity: iTF_00658649;
80% Identity: -