Ebil028506.1
Basic Information
- Insect
- Epinotia bilunana
- Gene Symbol
- -
- Assembly
- GCA_947049265.1
- Location
- CAMRIQ010000350.1:971595-983870[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 2.3e-05 0.0019 19.7 4.9 1 23 216 238 216 238 0.98 2 17 2.1e-05 0.0017 19.8 5.2 1 23 244 266 244 266 0.97 3 17 0.0016 0.13 13.9 1.0 1 23 272 294 272 294 0.97 4 17 1.5e-05 0.0012 20.3 1.1 1 23 300 322 300 322 0.96 5 17 1.5e-05 0.0013 20.2 3.2 1 23 363 385 363 385 0.97 6 17 1.3e-05 0.001 20.5 5.0 1 23 389 411 389 411 0.98 7 17 0.015 1.2 10.8 2.0 1 23 417 439 417 439 0.99 8 17 6.8e-05 0.0055 18.2 2.4 1 23 445 467 445 467 0.98 9 17 1.7e-05 0.0014 20.1 2.3 1 23 473 495 473 495 0.99 10 17 0.00049 0.04 15.5 1.2 1 23 501 523 501 523 0.94 11 17 7.6e-06 0.00062 21.2 0.1 1 23 529 551 529 551 0.98 12 17 1.1e-05 0.0009 20.7 4.0 1 23 563 585 563 585 0.97 13 17 0.00011 0.0093 17.5 6.5 1 23 591 613 591 613 0.97 14 17 0.00011 0.0093 17.5 3.0 1 23 619 641 619 641 0.97 15 17 1.2e-06 9.6e-05 23.7 1.8 1 23 647 669 647 669 0.98 16 17 0.00028 0.022 16.3 0.7 1 23 675 697 675 697 0.97 17 17 7.1e-06 0.00058 21.3 4.6 1 23 703 726 703 726 0.98
Sequence Information
- Coding Sequence
- ATGGAGTTTCTGCTTTCGTGTCGCTGCTGCCTGCTGCGCCCGCCCGAGAAAGGAATCCACACGCTGTACCATCACCTCGGCAAAACTGAAATATACTCCGACATGCTACGAGATTGCTTCGACATACatTTGACGTTAGGGAATGATGAGTGCGGGATCTGCGAGGTGTGCGTGGGCCGGCTGCGGGACGCGAAGGACTTCAAGCAGCAAGTGCAGCGCAGCCAGGCGGAGCTGCAGGCACGGATGCAGGGAACATGGAATGCCAGGGATGACTTCACTCGCAAGCTCAACATCAAGTTGGAGAAAGCTTCTGGAGATGAGGCGGTCATACGTGATATTAAGTTGGAGAAGTCAGACGTGGAGATGGCTGATGGGGCGGTTGTATCACTGGCATTATACGGCGCACCGCCAACGGCCGCGCAGCTCGCTCTGAAAAACGCCGGCCTCAGCACAAAGCCGGCAGTGATTTTGCTGGCTCCGACTGCGACTAGGCCGGCTGCAACCGCAACGAAGCCGCCATCGACCGTGACATTTCCGACAAGGGAGACATCGTCGTCGCCGGACACATCGCCGAGACATGCGACATCGCCGACAGAGGGAACGTCGCCGATCCCGGACGCGACTAAACCTGCCCGCGGCGTGATCCACACCTGCAAATATTGCCAGAAGTCGTTCGACCACCAATCAGCCCTCGTACTCCATCAGCGCCTACACACTGGAGAAAAACCCTATTCGTGCAACGTCTGCCACAAGAGATTCTCGCAAAAGGGCAACTTGAACTCCCATTTCAAATACCACATGGGCGATTATCGATTCTTCTGCGAAATCTGCAACAAAAGGTTCACAGAGAAGTGGATCATGGCTAACCATATGAAGACACACACTGGAGAAAAACCTCACGCTTGCGAAGTATGCAATAAAAAGTTTGCACTGAAAGGTAATTTGACTGTTCATTTGAAAACTCATGTAAAAAAAGCTGAAGATGATAAAGACCAAACAGGTGAAAAGCCGGTGTGCAAAAAGGAGACACAAGGAAGTAAGTCGAGAAGTAGTTCAACAGGTAaggaacagacggacggaaaaCTCTTCGAGTGCGAAGTATGCAATAAGAAATTTGCTCAGAAATGCAACTTAACTGCTCATTTAAAGTTTCATGCGCCCTCGTTCTCTTGCGAACACTGTGAGAAGAAATTCGCTTCTAAATGTAACTTGAACGCTCATATGCTTCGTCACACAGGGTTGGCCATGTACAAGTGTGACATATGCAGTAACCAGTATAAATACAAACGTTCTTTAGACCTTCATTTAACAACTCACACGGGAGACTACAAATACACGTGCAATGTCTGCAATAAACAATTCGTACATAGAGAGACCATGAAGCGACATGTGCTTGTACACACTGGAGAAAAACCTTACACCTGTGACATATGCAATAAGCAATATAAATCTAAGCGATCTTTATCCCTCCATATGACAACGCATACAGGAGACTATAAATATACGTGCAATGTGTGCAATAAACAGTTCGTCCATGAAGCGACCATGAAACGGCACGTGGTTGAACACACAGGAGAAAAGCCTTTCGTCTGTGATATATGTAATAAGGCGTATCCGCTAAAGGTTGATCTGATCAAACATATGCAAACGCACACTGGTATAAAACCGGCTGGTTCCGGAAATGTTTATTGCTGTGAAATTTGCGGAAAACAGTTTAGGCAAAAGAATTACTTTAATAAGCACATGGATATCCACAGCGGCAAAAGGCCGCATATGTGTGAAATCTGTAGTAAAACTTTTACACACAAGTATCTCTTAAAAACCCACAAATTAACACACTCTAAAGAAAAACCCTTCTGCTGCAAACTATGTCCAAAGCGATTCCGGATGAGCAAAGGTCTTCAAAGTCACATGCTCATTCACGAAGGCCTAAAACCATACATCTGCGATATATGCAGTAAGCAATTTAGACATAAATCCGCTCTAATGGTGCACATTCGACGGCACACTGGACATAAACCACACTCGTGCGATATCTGTAAAAGAGAGTTCATCGTTTTGGCTGAATTGAAAGTGCATTACCGTAGTCATACTGGAGAGCAACCATATCAGTGCGAAATATGCCATAGGAAATTCGCGCGGCCTGACCATTTCAGGAAGCACGTTAAGCGCGTTCACAACGAGAAGCCCGCGAAGGCTGCCGCGGCGGCTGCGATGCAGCGACCCTCGCAGATGGCGTCTAATGCTGAGTTTAGACGGTATAAGTCGCTGGCGCCGGTGGCCTTGGCGTACCAGAGATGGCAGGGGATGGGCAATATTTAa
- Protein Sequence
- MEFLLSCRCCLLRPPEKGIHTLYHHLGKTEIYSDMLRDCFDIHLTLGNDECGICEVCVGRLRDAKDFKQQVQRSQAELQARMQGTWNARDDFTRKLNIKLEKASGDEAVIRDIKLEKSDVEMADGAVVSLALYGAPPTAAQLALKNAGLSTKPAVILLAPTATRPAATATKPPSTVTFPTRETSSSPDTSPRHATSPTEGTSPIPDATKPARGVIHTCKYCQKSFDHQSALVLHQRLHTGEKPYSCNVCHKRFSQKGNLNSHFKYHMGDYRFFCEICNKRFTEKWIMANHMKTHTGEKPHACEVCNKKFALKGNLTVHLKTHVKKAEDDKDQTGEKPVCKKETQGSKSRSSSTGKEQTDGKLFECEVCNKKFAQKCNLTAHLKFHAPSFSCEHCEKKFASKCNLNAHMLRHTGLAMYKCDICSNQYKYKRSLDLHLTTHTGDYKYTCNVCNKQFVHRETMKRHVLVHTGEKPYTCDICNKQYKSKRSLSLHMTTHTGDYKYTCNVCNKQFVHEATMKRHVVEHTGEKPFVCDICNKAYPLKVDLIKHMQTHTGIKPAGSGNVYCCEICGKQFRQKNYFNKHMDIHSGKRPHMCEICSKTFTHKYLLKTHKLTHSKEKPFCCKLCPKRFRMSKGLQSHMLIHEGLKPYICDICSKQFRHKSALMVHIRRHTGHKPHSCDICKREFIVLAELKVHYRSHTGEQPYQCEICHRKFARPDHFRKHVKRVHNEKPAKAAAAAAMQRPSQMASNAEFRRYKSLAPVALAYQRWQGMGNI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00658648;
- 90% Identity
- iTF_00658648;
- 80% Identity
- -