Basic Information

Gene Symbol
Rhobtb3
Assembly
GCA_947049265.1
Location
CAMRIQ010000451.1:67307-96506[-]

Transcription Factor Domain

TF Family
BTB
Domain
zf-C2H2|ZBTB
PFAM
PF00651
TF Group
Zinc-Coordinating Group
Description
The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.0012 0.6 11.4 0.1 14 68 2 62 1 87 0.83
2 4 10 4.8e+03 -1.1 0.1 27 68 1102 1150 1078 1176 0.74
3 4 1.6e-05 0.0079 17.5 0.4 47 109 2370 2431 2362 2432 0.83
4 4 1.4e-16 6.9e-14 53.1 0.1 6 106 2456 2555 2452 2559 0.92

Sequence Information

Coding Sequence
ATGGTGATAATTAGCGGCGCGAAAGGCTTCCCCGTGCACCGGTTCATGATGGCCGCGGCTTGCGAGGcgttccacaggctgctcgccaccgactcacgctcggacctggcgcggtcctccagcgagagcagtatggtaagtgtgttcatgatggcggcggcttgcgaggcgttccacaggctgctcgccaccgactcacgctcggacctggcgcggtcctccagcgagagcagtatggtaagtgtgttcatgatggcggcggcttgcgaggcgttccacaggctgctcgccaccgactcacgctcggacctggcgcggtcctccagcgagagcagtatggtaagtgtgttcatgatggcggcggcttgcgaggcgttccacaggctgctcgccaccgactcacgctcggacctggcgcggtcctccagcgagagcagtatggtaagtgtgttcatgatggcggcggcttgcgaggcgttccacaggctgctcgccaccgactcacgctcggacctggcgcggtcctccagcgagagcagtatggtaagtgtgttcatgatggcggcggcttgcgaggcgttccacaggctgctcgccaccgactcacgctcggacctggcgcggtcctccagcgagagcagtatggtaagtgtgttcatgatggcggcggcttgcgaggcgttccacaggctgctcgccaccgactcacgctcggacctggcgcggtcctccagcgagagcagtatggtaagtgtgttcatgatggcggcggcttgcgaggcgttccacaggctgctcgccaccgactcacgctcggacctggcgcggtcctccagcgagagcagtatggtaagtgtgttcatgatggcggcggcttgcgaggcgttccacaggctgctcgccaccgactcacgctcggacctggcgcggtcctccagcgagagcagtatggtaagtgtgttcatgatggcggcggcttgcgaggcgttccacaggctgctcgccaccgactcacgctcggacctggcgcggtcctccagcgagagcagtatggtaagtgtgttcatgatggcggcggcttgcgaggcgttccacaggctgctcgccaccgactcacgctcggacctggcgcggtcctccagcgagagcagtatggtaagtgtgttcatgatggcggcggcttgcgaggcgttccacaggctgctcgccaccgactcacgctcggacctggcgcggtcctccagcgagagcagtatggtaagtgtgttcatgatggcggcggcttgcgaggcgttccacaggctgctcgccaccgactcacgctcggacctggcgcggtcctccagcgagagcagtatggtaagtgtgttcatgatggcggcggcttgcgaggcgttccacaggctgctcgccaccgactcacgctcggacctggcgcggtcctccagcgagagcagtatggtaagtgtgttcatgatggcggcggcttgcgaggcgttccacaggctgctcgccaccgactcacgctcggacctggcgcggtcctccagcgagagcagtatggtaagtgtgttcatgatggcggcggcttgcgaggcgttccacaggctgctcgccaccgactcacgctcggacctggcgcggtcctccagcgagagcagtatggtaagtgtgttcatgatggcggcggcttgcgaggcgttccacaggctgctcgccaccgactcacgctcggacctggcgcggtcctccagcgagagcagtatggtaagtgtgttcatgatggcggcggcttgcgaggcgttccacaggctgctcgccaccgactcacgctcggacctggcgcggtcctccagcgagagcagtatggtaagtgtgttcatgatggcggcggcttgcgaggcgttccacaggctgctcgccaccgactcacgctcggacctggcgcggtcctccagcgagagcagtatggtaagtgtgttcatgatggcggcggcttgcgaggcgttccacaggctgctcgccaccgactcacgctcggacctggcgcggtcctccagcgagagcagtatggtaagtgtgttcatgatggcggcggcttgcgaggcgttccacaggctgctcgccaccgactcacgctcggacctggcgcggtcctccagcgagagcagtatggtaagtgtgttcatgatggcggcggcttgcgaggcgttccacaggctgctcgccaccgactcacgctcggacctggcgcggtcctccagcgagagcagtatggtaagtgtgttcatgatggcggcggcttgcgaggcgttccacaggctgctcgccaccgactcacgctcggacctggcgcggtcctccagcgagagcagtatggtaagtgtgttcatgatggcggcggcttgcgaggcgttccacaggctgctcgccaccgactcacgctcggacctggcgcggtcctccagcgagagcagtatggtaagtgtgttcatgatggcggcggcttgcgaggcgttccacaggctgctcgccaccgactcacgctcggacctggcgcggtcctccagcgagagcagtatggtaagtgtgttcatgatggcggcggcttgcgaggcgttccacaggctgctcgccaccgactcacgctcggacctggcgcggtcctccagcgagagcagtatggtaagtgtgttcatgatggcggcggcttgcgaggcgttccacaggctgctcgccaccgactcacgctcggacctggcgcggtcctccagcgagagcagtatggtaagtgtgttcatgatggcggcggcttgcgaggcgttccacaggctgctcgccaccgactcacgctcggacctggcgcggtcctccagcgagagcagtatggtaagtgtgttcatgatggcggcggcttgcgaggcgttccacaggctgctcgccaccgactcacgctcggacctggcgcggtcctccagcgagagcagtatggtaagtgtgttcatgatggcggcggcttgcgaggcgttccacaggctgctcgccaccgactcacgctcggacctggcgcggtcctccagcgagagcagtatggtaagtgtgttcatgatggcggcggcttgcgaggcgttccacaggctgctcgccaccgactcacgctcggacctggcgcggtcctccagcgagagcagtatggtaagtgtgttcatgatggcggcggcttgcgaggcgttccacaggctgctcgccaCCGACTCACGCTCGGACCTGGCGCGGTCCTCCGGCGAGAGCAGTATGGTAAGTGTGTTCAtgatggcggcggcttgcgaggcgttccacaggctgctcgccaccgactcacgctcggacctggcgcggtcctccagcgagagcagtatggtaagtgtgttcatgatggcggcggcttgcgaggcgttccacaggctgctcgccaccgactcacgctcggacctggcgcggtcctccagcgagagcagtatggtaagtgtgttcatgatggcggcggcttgcgaggcgttccacaggctgctcgccaccgactcacgctcggacctggcgcggtcctccagcgagagcagtatggtaagtgtgttcatgatggcggcggcttgcgaggcgttccacaggctgctcgccaccgactcacgctcggacctggcgcggtcctccagcgagagcagtatggtaagtgtgttcatgatggcggcggcttgcgaggcgttccacaggctgctcgccaccgactcacgctcggacctggcgcggtcctccagcgagagcagtatggtaagtgtgttcatgatggcggcggcttgcgaggcgttccacaggctgctcgccaccgactcacgctcggacctggcgcggtcctccagcgagagcagtatggtaagtgtgttcatgatggcggcggcttgcgaggcgttccacaggctgctcgccaccgactcacgctcggacctggcgcggtcctccagcgagagcagtatggtaagtgtgttcatgatggcggcggcttgcgaggcgttccacaggctgctcgccaccgactcacgctcggacctggcgcggtcctccagcgagagcagtatggtaagtgtgttcatgatggcggcggcttgcgaggcgttccacaggctgctcgccaccgactcacgctcggacctggcgcggtcctccagcgagagcagtatggtaagtgtgttcatgatggcggcggcttgcgaggcgttccacaggctgctcgccaccgactcacgctcggacctggcgcggtcctccagcgagagcagtatggtaagtgtgttcatgatggcggcggcttgcgaggcgttccacaggctgctcgccaccgactcacgctcggacctggcgcggtcctccagcgagagcagtatggtaagtgtgttcatgatggcggcggcttgcgaggcgttccacaggctgctcgccaccgactcacgctcggacctggcgcggtcctccagcgagagcagtatggtaagtgtgttcatgatggcggcggcttgcgaggcgttccacaggctgctcgccaccgactcacgctcggacctggcgcggtcctccagcgagagcagtatggtaagtgtgttcatgatggcggcggcttgcgaggcgttccacaggctgctcgccaccgactcacgctcggacctggcgcggtcctccagcgagagcagtatggtaagtgtgttcatgatggcggcggcttgcgaggcgttccacaggctgctcgccaccgactcacgctcggacctggcgcggtcctccagcgagagcagtatggtaagtgtgttcatgatggcggcggcttgcgaggcgttccacaggctgctcgccaccgactcacgctcggacctggcgcggtcctccagcgagagcagtatggtaagtgtgttcatgatggcagcggcttgcgaggcgttccacaggctgctcgccaccgactcacgctcggacctggcgcggtcctccagcgagagcagtatggtaagtgtgttcatgatggcggcggcttgcgaggcgttccacaggctgctcgccaccgactcacgctcggacctggcgcggtcctccagcgagagcagtatggtaagtgtgttcatgatggcggcggcttgcgaggcgttccacaggctgctcgccaccgactcacgctcggacctggcgcggtcctccagcgagagcagtatggtaagtgtgttcatgatggcggcggcttgcgaggcgttccacaggctgctcgccaccgactcacgctcggacctggcgcggtcctccagcgagagcagtatggtaagtgtgttcatgatggcggcggcttgcgaggcgttccacaggctgctcgccaCCGACTCACGCTCGGACCTGGCGCGGTCCTCCAGAGAGAGCAGTATGGTAAGTGTGTTCAtgatggcggcggcttgcgaggcgttccacaggctgctcgccaCCGACTCACGCTCGGACCTGGCGCGGTCCTCCGGCGAGAGCAGTATGGTAAGTGTGTTCAtgatggcggcggcttgcgaggcgttccacaggctgctcgccaCCGACTCACGCTCGGACCTGGCGCGGTCCTCCGGCGAGAGCAGTATGGTAAGTGTGTTCAtgatggcggcggcttgcgaggcgttccacaggctgctcgccaCCGACTCACGCTCGGACCTGGCGCGGTCCTCCGGCGAGAGCAGTATGGTAAGTGTGTTCAtgatggcggcggcttgcgaggcgttccacaggctgctcgccaccgactcacgctcggacctggcgcggtcctccagcgagagcagtatggtaagtgtgttcatgatggcggcggcttgcgaggcgttccacaggctgctcgccaccgactcacgctcggacctggcgcggtcctccagcgagagcagtatggtaagtgtgttcatgatggcggcggcttgcgaggcgttccacaggctgctcgccaccgactcacgctcggacctggcgcggttctccagcgagagcagtatggtaagtgtgttcatgatggcggcggcttgcgaggcgttccacaggctgctcgccaccgactcacgctcggacctggcgcggtcctccagcgagagcagtatggtaagtgtgttcatgatggcggcggcttgcgaggcgttccacaggctgctcgccaccgactcacgctcggacctggcgcggtcctccagcgagagcagtatggtaagtgtgttcatgatggcggcggcttgcgaggcgttccacaggctgctcgccaccgactcacgctcggacctggcgcggtcctccagcgagagcagtatggtaagtgtgttcatgatggcggcggcttgcgaggcgttccacaggctgctcgccaccgactcacgctcggacctggcgcggtcctccagcgagagcagtatggtaagtgtgttcatgatggcggcggcttgcgaggcgttccacaggctgctcgccaccgactcacgctcggacctggcgcggtcctccagcgagagcagtatggtaagtgtgttcatgatggcggcggcttgcgaggcgttccacaggctgctcgccaccgactcacgctcggacctggcgcggtcctccagcgagagcagtatggtaagtgtgttcatgatggcggcggcttgcgaggcgttccacaggctgctcgccaCCGACTCACGCTCGGACCTGGCGCGGTCCTCCAGCGAGAGCAGTATGGTAAGTGTGTTCATGATGGCGGCAGCTTGCGAGGcgttccacaggctgctcgccaCCGACTCACGCTCGGACCTGGCGCGGTCCTCCAGCGAGAGCAGTATGGTAAGCAGCATGGGGGAAGCGACGACCGGGGACTTCAACGAGGATACTGAGTACTTGATCCGACAAGATCAAGCGAAACAAATGAGAGTATGGGATCAGATAAAGCGGCGCTCGTCATGTCAGATTCTAACCCTCAGCGACAGTTGCAAGAAGCCTCCAGACCTCTACAGGGAAGTCAACCACCCCGCTATCAactccatacgagttgtcaagTGCGACAAAATCCAACACGCGACATCCCAAACGCAAACCATTGTCACGATGAGCAAGCTCATCTCACAAACAGTCATGCAAGAAATCATCAACTTCGTCTACACCGGCGCTCTGGACAGCACGGCCTTCAAGCAACAGGAAATCCGCCAAGCGGCGGAGCTGCTGGGTTTCCACGAGCTGACGAAGCTCAGCCAGTTCATACTGGATCAGCATCTGTTGTTCGACAAGGTTTTCATGCAGAAGTTCCACATGCCAATACCTCAGCGGCTGCGTGAAATGTACGTCGAACGTAACCTATTCGCAGACATCACCTTTGACCTTGACGACGGCATGCACCTGGCGCACAGAGCTATCCTGATGGCGCGCTGTGACCCCATGAAGGCAATGTTCCAGGGGCACTTTCGTGAGAGTACGAGCAGAGTGATCTCCTTCCCCGGCGTGAAAATGTACGCATTCCACATGCTCCTCTGCTACATATACTGCGACAACATCCCGTCCGTGGAACCGACGCGCTGTCTACAACTCCTGGAGCTGGCCAACAGGCTGTGCATGAACCGGCTGGTGAACCTGGTGGAGGCGAGGGTCATCGACCGGCTGCAGCATCAAGACAGATTGTGCGGAGAAGATGACCAAGTGGTTGAAATAGTGCTTTCGTTGTTGGAGCCTGTAAAGGTAAATATATTATGCGTGCTACTATGA
Protein Sequence
MVIISGAKGFPVHRFMMAAACEAFHRLLATDSRSDLARSSSESSMVSVFMMAAACEAFHRLLATDSRSDLARSSSESSMVSVFMMAAACEAFHRLLATDSRSDLARSSSESSMVSVFMMAAACEAFHRLLATDSRSDLARSSSESSMVSVFMMAAACEAFHRLLATDSRSDLARSSSESSMVSVFMMAAACEAFHRLLATDSRSDLARSSSESSMVSVFMMAAACEAFHRLLATDSRSDLARSSSESSMVSVFMMAAACEAFHRLLATDSRSDLARSSSESSMVSVFMMAAACEAFHRLLATDSRSDLARSSSESSMVSVFMMAAACEAFHRLLATDSRSDLARSSSESSMVSVFMMAAACEAFHRLLATDSRSDLARSSSESSMVSVFMMAAACEAFHRLLATDSRSDLARSSSESSMVSVFMMAAACEAFHRLLATDSRSDLARSSSESSMVSVFMMAAACEAFHRLLATDSRSDLARSSSESSMVSVFMMAAACEAFHRLLATDSRSDLARSSSESSMVSVFMMAAACEAFHRLLATDSRSDLARSSSESSMVSVFMMAAACEAFHRLLATDSRSDLARSSSESSMVSVFMMAAACEAFHRLLATDSRSDLARSSSESSMVSVFMMAAACEAFHRLLATDSRSDLARSSSESSMVSVFMMAAACEAFHRLLATDSRSDLARSSSESSMVSVFMMAAACEAFHRLLATDSRSDLARSSSESSMVSVFMMAAACEAFHRLLATDSRSDLARSSSESSMVSVFMMAAACEAFHRLLATDSRSDLARSSSESSMVSVFMMAAACEAFHRLLATDSRSDLARSSSESSMVSVFMMAAACEAFHRLLATDSRSDLARSSSESSMVSVFMMAAACEAFHRLLATDSRSDLARSSSESSMVSVFMMAAACEAFHRLLATDSRSDLARSSSESSMVSVFMMAAACEAFHRLLATDSRSDLARSSSESSMVSVFMMAAACEAFHRLLATDSRSDLARSSSESSMVSVFMMAAACEAFHRLLATDSRSDLARSSSESSMVSVFMMAAACEAFHRLLATDSRSDLARSSSESSMVSVFMMAAACEAFHRLLATDSRSDLARSSGESSMVSVFMMAAACEAFHRLLATDSRSDLARSSSESSMVSVFMMAAACEAFHRLLATDSRSDLARSSSESSMVSVFMMAAACEAFHRLLATDSRSDLARSSSESSMVSVFMMAAACEAFHRLLATDSRSDLARSSSESSMVSVFMMAAACEAFHRLLATDSRSDLARSSSESSMVSVFMMAAACEAFHRLLATDSRSDLARSSSESSMVSVFMMAAACEAFHRLLATDSRSDLARSSSESSMVSVFMMAAACEAFHRLLATDSRSDLARSSSESSMVSVFMMAAACEAFHRLLATDSRSDLARSSSESSMVSVFMMAAACEAFHRLLATDSRSDLARSSSESSMVSVFMMAAACEAFHRLLATDSRSDLARSSSESSMVSVFMMAAACEAFHRLLATDSRSDLARSSSESSMVSVFMMAAACEAFHRLLATDSRSDLARSSSESSMVSVFMMAAACEAFHRLLATDSRSDLARSSSESSMVSVFMMAAACEAFHRLLATDSRSDLARSSSESSMVSVFMMAAACEAFHRLLATDSRSDLARSSSESSMVSVFMMAAACEAFHRLLATDSRSDLARSSSESSMVSVFMMAAACEAFHRLLATDSRSDLARSSSESSMVSVFMMAAACEAFHRLLATDSRSDLARSSSESSMVSVFMMAAACEAFHRLLATDSRSDLARSSSESSMVSVFMMAAACEAFHRLLATDSRSDLARSSRESSMVSVFMMAAACEAFHRLLATDSRSDLARSSGESSMVSVFMMAAACEAFHRLLATDSRSDLARSSGESSMVSVFMMAAACEAFHRLLATDSRSDLARSSGESSMVSVFMMAAACEAFHRLLATDSRSDLARSSSESSMVSVFMMAAACEAFHRLLATDSRSDLARSSSESSMVSVFMMAAACEAFHRLLATDSRSDLARFSSESSMVSVFMMAAACEAFHRLLATDSRSDLARSSSESSMVSVFMMAAACEAFHRLLATDSRSDLARSSSESSMVSVFMMAAACEAFHRLLATDSRSDLARSSSESSMVSVFMMAAACEAFHRLLATDSRSDLARSSSESSMVSVFMMAAACEAFHRLLATDSRSDLARSSSESSMVSVFMMAAACEAFHRLLATDSRSDLARSSSESSMVSVFMMAAACEAFHRLLATDSRSDLARSSSESSMVSVFMMAAACEAFHRLLATDSRSDLARSSSESSMVSSMGEATTGDFNEDTEYLIRQDQAKQMRVWDQIKRRSSCQILTLSDSCKKPPDLYREVNHPAINSIRVVKCDKIQHATSQTQTIVTMSKLISQTVMQEIINFVYTGALDSTAFKQQEIRQAAELLGFHELTKLSQFILDQHLLFDKVFMQKFHMPIPQRLREMYVERNLFADITFDLDDGMHLAHRAILMARCDPMKAMFQGHFRESTSRVISFPGVKMYAFHMLLCYIYCDNIPSVEPTRCLQLLELANRLCMNRLVNLVEARVIDRLQHQDRLCGEDDQVVEIVLSLLEPVKVNILCVLL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-