Esuc008095.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Epicampocera succincta
Gene Symbol
su(Hw)
Assembly
GCA_932527255.1
Location
CAKOBP010000031.1:2634817-2638117[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 12 0.0002 0.013 16.0 2.1 1 20 125 144 125 146 0.95
2 12 5.8e-06 0.00038 20.9 0.4 3 23 197 218 195 218 0.93
3 12 0.064 4.1 8.2 0.3 1 23 224 246 224 246 0.94
4 12 2.6e-06 0.00017 22.0 2.2 1 21 253 273 253 274 0.95
5 12 1.3e-05 0.00083 19.8 2.2 3 23 287 307 285 307 0.96
6 12 1.8e-05 0.0012 19.3 4.6 1 23 318 340 318 340 0.99
7 12 5.8e-05 0.0038 17.7 0.8 1 23 346 368 346 368 0.97
8 12 1.2e-05 0.00081 19.8 1.0 1 23 374 396 374 396 0.99
9 12 3e-06 0.00019 21.8 0.9 1 23 402 424 402 424 0.97
10 12 5.1e-05 0.0033 17.9 1.2 1 23 428 450 428 450 0.98
11 12 0.0024 0.16 12.6 0.6 2 22 464 484 463 487 0.91
12 12 1.3 83 4.1 0.2 3 23 502 523 500 523 0.93

Sequence Information

Coding Sequence
ATGAGCTCAAAAAACGATTCCGAAGATAGATCCCCGGATTTCAAAATACTCAATGACGAAAAGATTATGTCATCGAAAATTCCGGTGATGACTTCAGTACCGTTGTCGTCGACCAAACAAATCACTCTGTCCATTGCCAAACCTAAGAAACAGCTAAAACAAAAAAACATGGATCATTATGTGATGAAGACGGTCAAAGAAGAAAAAAGTACCGATACCGGTATTGAGGAGAGTGAAACCATTGATTTTATATTGGCAGACAATAGCGATGATGAACTGTCCAAGAAGGGTGACGAAATAACCGCGGAACTGCATTTGAGTGATGACGATCACGATTCTACTTTTACTGGAGCGACACAGGAGGTAGTTGAGCATGTTTGTGGAAAATGCTTTAAAACTTTTAGGCGTTTAAGGAGCTTAAAAAAACATATTGACTACTGTCGATTCGATAGTGGTTATCACTTGCGTAAAGAGGAAATGTTGAAAAACTTGGAGAAAATTGAAAAGGATGCGGTTATTATGGAAAAGAAAGATGTCTGCTTTTGCTGTGGAGAAAGTTATGACACATTTCATTTGGGCCACATAAATTGTCCAGATTGTCCAAAATCATTTAAGACACAAATGAGCTATGAGCGTCATATTTTTATAACACACTCAGAATTTGATGATCATCCCTGTAGCATTTGTAATGCCAAATTGCGCAGTGCTAATCTGCTACAATTGCACGAAGAGCAACATCGTAATCGGGGAAAACCTTTTGCTTGCAAGATATGCGGCAAAGATTTTACTCGTTCGTATCATTTGAGTCGTCATCAAAAGTTTTCATCTTGTTCAGCCAGTGAAAATGACACCATGCACTGTAAAGTCTGCAACAAAGCTTTCTATCGTTTGGACAATTTGAGAGCACATCTTAAACAGCATTTGGGTACTCAGCAAACAAAAAAATCGGAATATACATGTCCAACGTGCAAAAAATGTTTCTATAGTCTGTCAACGCTAAAtatccataatcgtacccacacgggtgaaaaaccttttgactgtgatttatgtgagaaaaaatttccatccctggtagctttaaagaagcatagacgttatcatactggcgaaaaaccttatacctgttcagtatgcaagcaatcatttgctgttaaggaagttttaaatcgacatatgaaacgtcacactggcgaaaggcctcatgtttgcagtgaatgtggtaaaagtttcatccagggcactcaacttcgtactcacattaaaattcatttgagacccttcgagtgcgatcagtgtacagaaaaatatagaaccgagaagcaATTAGCGAAACACATGAAGGAACACACTGCCTCAAAGCGAAAGGGACGTGCACGAATGGCCAATAAATGCGAAATATGCAAAACGGGCTTTAAAACCGAACTTGAGTTCAACAAtcacatgaaggccggtacacatgtcaCTCCAGCTCAAAGACGCAGATTAAAAACTCGAACTGATTGTGCAGTTTGCAAAGAAAATTTTGATTCCGTTCAAAGTCTTCAATTCCATATTCTCAAAGTTCACCAAGAAGATCCAGAATCATTTATCAATGAAGATCCCTTTAGTACTCCTTCGCACGTGGAAAACGATGACACAATTTTGATGCCTGCTCCAAAAGTGATTAAAATTGAAGATGCACAAGGCCAACGTATCGAATTTGTCACCACTAATAATGATGGGGAAATTTTAAACACGAATGTCAAAGGTCTCAGCCAAAAACAAGTCTTAAGTCCAGAGAAAAATCCAGACACTTCGAATAAAGTACAGATCCTAGAACAGTACATAATTGATCATAGTCCTTCAACTTCAGCAAATACTGATGTCAAGCAGACAATATTTTTAACAAATGAAGCTTACACTGTTATACCATTAGAATCAAATGGAGGTTTAATAGAACCCATTACAACAACCACGATGCCAAGCAATATTAAAAGTCCCGAAAGCAAAAAAGATCAACGCAAATCTTTGGCCGAAAGTTTGGCAGCTGCCATAGCTGACAACGACCCCAACGATCTAGAAAATGGCAGTGAATTTCTTGAAGAAGACCTTAAAATAAAAGAAAACGTGAGTAAGCTGTTGGACATGCTGGTGGATAGTGCAACACTTAAGAAATTTGGCTGGCCAGTTACTTCAGAAGAAACTGTGCTTTGTAAAGTTATTGAAAATTGTGGTCACGATTTATCCAGAGACCAGTATAACTATACCAGTTGGGATTATGCCAGTCGAATGCGTGAATTTGTCAAACTACTTTTCACCGTTGTCATTCACAATGATTCTATAAAAGAATTACTCAATAACTATCCAATCGATGAAGTTATTGAATATGTCTTGGGCAATGATGATGATGAAGATGAGGAGGACGATGAAAACGACAACGGGAATGAAAAAAAAGAAACCGACAAAAATGATTCTGCTGTTTTGGAAACCATCAAATGTGAAAATGACGATTAA
Protein Sequence
MSSKNDSEDRSPDFKILNDEKIMSSKIPVMTSVPLSSTKQITLSIAKPKKQLKQKNMDHYVMKTVKEEKSTDTGIEESETIDFILADNSDDELSKKGDEITAELHLSDDDHDSTFTGATQEVVEHVCGKCFKTFRRLRSLKKHIDYCRFDSGYHLRKEEMLKNLEKIEKDAVIMEKKDVCFCCGESYDTFHLGHINCPDCPKSFKTQMSYERHIFITHSEFDDHPCSICNAKLRSANLLQLHEEQHRNRGKPFACKICGKDFTRSYHLSRHQKFSSCSASENDTMHCKVCNKAFYRLDNLRAHLKQHLGTQQTKKSEYTCPTCKKCFYSLSTLNIHNRTHTGEKPFDCDLCEKKFPSLVALKKHRRYHTGEKPYTCSVCKQSFAVKEVLNRHMKRHTGERPHVCSECGKSFIQGTQLRTHIKIHLRPFECDQCTEKYRTEKQLAKHMKEHTASKRKGRARMANKCEICKTGFKTELEFNNHMKAGTHVTPAQRRRLKTRTDCAVCKENFDSVQSLQFHILKVHQEDPESFINEDPFSTPSHVENDDTILMPAPKVIKIEDAQGQRIEFVTTNNDGEILNTNVKGLSQKQVLSPEKNPDTSNKVQILEQYIIDHSPSTSANTDVKQTIFLTNEAYTVIPLESNGGLIEPITTTTMPSNIKSPESKKDQRKSLAESLAAAIADNDPNDLENGSEFLEEDLKIKENVSKLLDMLVDSATLKKFGWPVTSEETVLCKVIENCGHDLSRDQYNYTSWDYASRMREFVKLLFTVVIHNDSIKELLNNYPIDEVIEYVLGNDDDEDEEDDENDNGNEKKETDKNDSAVLETIKCENDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00045491;
90% Identity
-
80% Identity
-