Efoe001354.1
Basic Information
- Insect
- Epiblema foenella
- Gene Symbol
- Gcfc2
- Assembly
- GCA_963556455.1
- Location
- OY747095.1:22782926-22787513[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.0016 34 5.2 0.0 175 205 75 105 66 106 0.81 2 2 2e-11 4.3e-07 31.0 0.1 4 50 97 143 94 152 0.92
Sequence Information
- Coding Sequence
- ATGAATATCATTTATGCAGGTCGCGCGGGTAAGGCCGCGGATTCTGAGGAGAAGATCCGGCGCACGGCGGAGCGCGaggggcggcggcgcgcgcggcggctaGCGCGagaggcggcggcggccgcggccgGCGCGCCCGTGCCGAGGTCGCACCGCGACGGGGACTCAAGCGACGACGACCTGCCGCCCAGCGAGCAACACTACTACCGACAGGAGAAAGAGAGCATacgcgcggcggcgggcggacTGTTCTCGGACGCGCTGCCGGCGTGGCGCAGCGCGCGCGGCGTGTGCGCGCGGCTGGCGCGCTGGCGTCGCCGCGACCCCGCGCTCTACGCCGACGCCTACGTGCCCGACTGCCTGCCCAAGCTGCTCGCGCCCTACGTGCGTCACCAGCTTATTCTGTGGAATCCCCTTGCAGACGAAGACAATGAGGATTACGAAAGGATGGATTGGTACAAGTAA
- Protein Sequence
- MNIIYAGRAGKAADSEEKIRRTAEREGRRRARRLAREAAAAAAGAPVPRSHRDGDSSDDDLPPSEQHYYRQEKESIRAAAGGLFSDALPAWRSARGVCARLARWRRRDPALYADAYVPDCLPKLLAPYVRHQLILWNPLADEDNEDYERMDWYK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -