Egra016554.1
Basic Information
- Insect
- Ephydra gracilis
- Gene Symbol
- Rel
- Assembly
- GCA_001014675.1
- Location
- JXPQ01006542.1:69549-72797[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.5e-14 1.3e-10 41.7 0.1 5 50 178 223 167 226 0.85 2 3 1.5e-18 7.7e-15 55.5 0.6 87 168 222 315 220 316 0.90 3 3 1.3 6.6e+03 -2.9 0.0 89 123 743 779 725 785 0.70
Sequence Information
- Coding Sequence
- ATGTCAATGGACTTGTACGATATGGATAATAAAACACATATACGTCACAATAGCGAGTCATCGAATGCCAGCACAAGTGGATATTCAACGATGTCGCCGTATGGAATTGATCATGGTAATATATCGCCCTCTTCAAGCACAGTTTCCATGTCGTCGACATCGGCTGGTTCACCCAGAACAGCGAACCTTCAGACAGATTTTTCCCATCTGAATTTACcaaatgcaaatgtaaattaTCAACACTATCAACACAATGCAATCGCTGATCTGTCTTACCGACAAAAATTTACCACGGCAACAGCTGCAACACATGGAGGAATAAATTTTCCTAACCACATGTACGCAAATACATCAAATTTGTCCTTGGTGGATAATTCAAGCCTCATGCCGAGTTACACTGTTCCAGTGCATAACAATTATGGATCTATGCAACCAATGGACATTGAACAGTCGCTACCCACTAAAATTGGGAGCATTAAGAAACAATATCCAGCAAAATTGCGAATAACAGAGCAACCGGTAGATAAGTNNNNGCAACCGGTAGATAAGTTCCGTTTTCGTTATAAATCAGAGATGCATGGAACACATGGGTCATTAACAAGTGCAACATCCAATCGAACTTCCAAACGTTACCCAGAAGTGGAATTGTTGAATTATAATGAGCAAGGCTTTGTGgcacaatttcaaaacatgGGCATTATACATACGGCAAAAAAGTATATTACAAATGAGCTATTTGAAAAGAAACATAAACGTTTGTGCTCGCAATTGGGTGTGCGCGTTCTGAGTGAAAGGCAACGCCAAGAGCTGTACAAAGAAACAGAGAAGGAAGCTAAAGCTATGAATTTAAATCAGgtGCGATTGTGTTTTGAAGCATTCCGCGTAGAAGCGAATAAAACGTTAACACCAATTGCTGCCCCTGTGTACACAAATCCTATAAATAATCGCAAGTCTGCACAAACGGGTGATTTGCGTATTGTTCGATTAAGCATTGCCACAGGCAGTGTTAGTGGTAAAGATGAACTTATATTGTTGGTTGAAAaggttagtaaaaaaaatataaaagtgagATTTTATGAGCTGAGTGACACTCACGATGAGCTTGTCTGGGAGGCTTATGGCACTTTTCGTGAATCGGATGTGCACCATCAATACGCAATTGTATGTCAAACGCCACCTTATAAAGACAAAGGCATCGATAAGCCCGTCGATGTTTTCATTGAACTGGTACGACCTTCTGATGATGAGCGCAGTCTTCCACTGCCATTCCGATATAAGCCGTTGGATACAGTTATATCGCGTAAACGTCGACGCACATGTTCTTCAGCAAATAGCagtaacaacagcagcaacaattccGCCAGTTCGATTGAGCTGCCAGTAACTGTCGCGGAGCAACAAGAAAATATGAACTTAACTGCCTTTTCTAATCCTGTTTCGAAAAATGATCTTACCATAAGTGAGGAGTTTAATATACGCGATATGCTGCGGGCAGAGTCAGATGATCTTGCCAAACTTGTTTTTGCGAATAATTCATCTTTAGATTTCAGTTTGTTAGAAACTGATGGTACGTCGAATGCTCACAAGGTGCAAGATcaccgaaaacaaaaaagtaatgccAAATTTGGAAATGTATATCTGGCAAGAATATTTGACATATTTAAACAGCTACATAATGTGAACCCGCAACCAACAAATAAAGAACTCCAAATCGCTGCAGTTAAAGTATCTAATATTTATAAGGAACACGCAGACCGCAGCGATAACGAAActctaattaatgaaataataattgctggTGATATACACTGTTTAATTaagctatttcaaattttaaaaaagctaaaTCTGGTTGAACTACTAAATAACGTATTGAATTCCAACAATGAAACAGGCATACACTGCGCGTGTCTGCATAACCAACACAATTACTTGCACGCGTTACTTGCCAATGGTTGTGATCCAAATATTCCAGATAAGCAAGGGAATACAGCAATGCATATTGCCGTACGGGAGAATCACAAGAAATGCGTAGAGAgccttttaaattttcaatacaaggATTCCGCTAAGAAGTTGAGTATAAAGATAAAAAACTATGAGGATGTGACACCGCTACACTTGGCTATTAAACTAGACTATAACGAAATAGCAAAAATTCTGTTGCGATTTGATGGTAGTGCCGCCAATGTATGTAGCAGCAAGGACGGTAACAATGCGCTGCATATGGCCATTGAACTTCAAAACCACGATATTGTGGATGCTTTGTTAAAAACTCGCGATGTTGCAAACACTCTTTCTGAACGCAATAATGCTGGACACCGGCCCATTGATCTAGCCAAAGAAATTTTCGCCAGCATTGGTAAAAGTGGTCAATTAATATTAGATATGATTAAACCGCTATACTCGGATATGGACATTGACGACAGTGAATTGGTAAGGGTTAAGGAAGAAGATTTAAGTTCAACATCAGCATCGGATGATGAAGATGTAAATGAAGAACAAATAACAAGTAATATTGATCAAATAAAAGCAGAAGATGAAATTAGTATGGAATCtgataataaaatcaatatcaaaaCCGAAACCGAAACCGAAACAAAACAAGAAGAGTATATACTAGAAGATAATAATAATACTGAGAGTATAAAACTCTTAGAACTAGCTTTAAAAAACTCAGTTACATATGCAAAGCTGGCAAATATTCTGGAACACGATAACAAATGGAAGAATATTGCTGAAAGTTCACATATGTCCCAGTTGATATGTCTTTGGTCGAATGCTACAGACATGCTTGAGTACGTTAAGAATAGAAGTAGTAATATTGAGTTTTCTGCATTTGCTCTTGCTATAGCTGaggatttaaaagttttattttag
- Protein Sequence
- MSMDLYDMDNKTHIRHNSESSNASTSGYSTMSPYGIDHGNISPSSSTVSMSSTSAGSPRTANLQTDFSHLNLPNANVNYQHYQHNAIADLSYRQKFTTATAATHGGINFPNHMYANTSNLSLVDNSSLMPSYTVPVHNNYGSMQPMDIEQSLPTKIGSIKKQYPAKLRITEQPVDKXXQPVDKFRFRYKSEMHGTHGSLTSATSNRTSKRYPEVELLNYNEQGFVAQFQNMGIIHTAKKYITNELFEKKHKRLCSQLGVRVLSERQRQELYKETEKEAKAMNLNQVRLCFEAFRVEANKTLTPIAAPVYTNPINNRKSAQTGDLRIVRLSIATGSVSGKDELILLVEKVSKKNIKVRFYELSDTHDELVWEAYGTFRESDVHHQYAIVCQTPPYKDKGIDKPVDVFIELVRPSDDERSLPLPFRYKPLDTVISRKRRRTCSSANSSNNSSNNSASSIELPVTVAEQQENMNLTAFSNPVSKNDLTISEEFNIRDMLRAESDDLAKLVFANNSSLDFSLLETDGTSNAHKVQDHRKQKSNAKFGNVYLARIFDIFKQLHNVNPQPTNKELQIAAVKVSNIYKEHADRSDNETLINEIIIAGDIHCLIKLFQILKKLNLVELLNNVLNSNNETGIHCACLHNQHNYLHALLANGCDPNIPDKQGNTAMHIAVRENHKKCVESLLNFQYKDSAKKLSIKIKNYEDVTPLHLAIKLDYNEIAKILLRFDGSAANVCSSKDGNNALHMAIELQNHDIVDALLKTRDVANTLSERNNAGHRPIDLAKEIFASIGKSGQLILDMIKPLYSDMDIDDSELVRVKEEDLSSTSASDDEDVNEEQITSNIDQIKAEDEISMESDNKINIKTETETETKQEEYILEDNNNTESIKLLELALKNSVTYAKLANILEHDNKWKNIAESSHMSQLICLWSNATDMLEYVKNRSSNIEFSAFALAIAEDLKVLF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -