Egra002591.1
Basic Information
- Insect
- Ephydra gracilis
- Gene Symbol
- Nfat5
- Assembly
- GCA_001014675.1
- Location
- JXPQ01035591.1:7659-11882[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.8e-34 1.5e-30 106.6 1.2 1 168 35 203 35 204 0.93 2 2 2.3 1.2e+04 -3.7 0.1 116 134 253 271 240 295 0.49
Sequence Information
- Coding Sequence
- CTGTATAAACTTGTATGCGCGTTAGACATGCGTGTGGCGAACAAGCGTCAGCCGGCGGTGCCACAGAATAGCATTGCCGCCTCGCAGAATGGGCAAGTACAATTGGAAATAGTGTTGCAGCCGGAGCAGCAGCATCGCGCCAGATATCAAACCGAGGGCAGTCGCGGCGCTGTTAAGGATCGCAGCGGCAATGGCTTTCCAATTGTACGCTTGACCGGCTACAATAAGCCCACTGTGCTGCAGGTATTCATTGGGACCGATGTGGGACGCGTAGCGCCACACATGTTCTATCAGGCCTGCAAAGTGGCTGGCAAAAACTNNNNNNNNNNNNNNNNNNGTAAAAACTCAACGCAATGCACTGAGCGCAAGATTGATGGCACAATGGTGATTGAGATTGATTTTAAGCCGGAATCCGAGATGACTGTCACCTGCGATTGTGTGGGCATATTAAAGGAACGCAACGTCGATGTTGAGCATCGGTTTCCCGATCATCTGgcacaaaagaataaaaagaaatcgaCACGCTGCCGCATGGTGTTTCGCACTGAGATCACACACGACGATGGCACCACGGAAACTTTGCAAGTTTGCTCCAATCCCATAATATGCACGCAACCGCCAGGCGTGCCAGAAATCTGCAAGAAGTCACTTAACTCGTGCCCCGTTGAGGGTGGCCTAGAGTTGTTTataattggtaaaaattttctgaaagacACACAAGTCATTTTTCAAGAGACCTACGAGCATGCAACCGAACAAAATGCCAACACAACGGCAACACAAGAATTAGCCATGCAGCAGCAGGCCTCCCAATTACTAAACGAAACACCATTGTGGGAGCAAACAGTCTTGCCAGACAAAGAATACTTGCAACAAACGCACCTCATTTGCACAGTGCCGCCATATATACAACAGAACATAATAAAGCCAAGCGAATCGCATTCGTTTGTCTACACGCCAAAGGGTTCCTACACCAAATTGGCCGCTGCCACTGCGCTAAGCACTCCATTTAATGGTAATGGTGGCTTATCAGCAGCTCAAG
- Protein Sequence
- LYKLVCALDMRVANKRQPAVPQNSIAASQNGQVQLEIVLQPEQQHRARYQTEGSRGAVKDRSGNGFPIVRLTGYNKPTVLQVFIGTDVGRVAPHMFYQACKVAGKNXXXXXXXKNSTQCTERKIDGTMVIEIDFKPESEMTVTCDCVGILKERNVDVEHRFPDHLAQKNKKKSTRCRMVFRTEITHDDGTTETLQVCSNPIICTQPPGVPEICKKSLNSCPVEGGLELFIIGKNFLKDTQVIFQETYEHATEQNANTTATQELAMQQQASQLLNETPLWEQTVLPDKEYLQQTHLICTVPPYIQQNIIKPSESHSFVYTPKGSYTKLAAATALSTPFNGNGGLSAAQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -