Egra014323.1
Basic Information
- Insect
- Ephydra gracilis
- Gene Symbol
- dl_1
- Assembly
- GCA_001014675.1
- Location
- JXPQ01000474.1:66547-69787[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.6e-70 3.4e-66 222.6 0.1 1 169 64 245 64 245 0.93 2 2 0.92 4.8e+03 -2.4 0.2 100 143 430 475 425 491 0.68
Sequence Information
- Coding Sequence
- ATGTTTCAAAACCAAAACAGTAGCGGTACCGTGCTTGGTGCGGGCGCCGCTAACACTATGGATCCAACGCAACAGCAGACAATGAACTACAATGGACTACAACACCAGCAGGCACAGCAGCAAGGCACGCCACATCACCAGCAGCACCAAGAatcaaaaaatgtgaaaaatgtgcGACAAAAGCCGTACGTTAAAATAACCGAACAACCAGCGGGCAAGGCATTGCGTTTTCGCTATGAGTGTGAAGGACGTTCAGCTGGTTCGATACCAGGTGTCAACTCCACACCCGAGAACCGTACCTATCCGACTATCGAGATTGTTGGCTACAAAGGGCGTGCTGTTGTGGTGGTGTCTTGCGTGACCAAGGATAAACCGTATAGGCCACATCCTCACAACTTGGTGGGCAAGGAGGGCTGCAAGAAGGGCGTTTGTACCCTGGAAATCAATAGCGAAACAATGCGTGCTGTGTTTAGTAATTTAGGTATACAATGTGTTAAGAAAAAGGATATTGAGGCGGCGCTGAAAGCACGTGAGGATATACGCGTGGATCCATTCAAAACTGGGTTCTCGCATCGCTTTCAGCCATCGAGCATTGATTTGAATTCGGTGCGTTTGTGCTTTCAAGTCTTTATGGAGAGCGAGCAAANNNNNNNNNNNNNCTTTATGGAGAGCGAGCAAAAGGGACGATTCACGGAGCCACTACCGCCCGTTGTTTCGGATCCGATTTTCGACAAGAAGGCAATGTCCGATCTGGTCATTTGTCGCTTGTGCACCTGCTCGGCTACAGTGCTTGGTAATACTCAAATAATACTTTTATGCGAGAAGGTTGCCAAAGAAGATATTGCTGTGCGTTTCTTTGAGGAGAAGAACGGTCAGGTAGTGTGGGAGGCATTCGGTGAGTTCCAGCACACTGATGTACACAAACAGACGGCCATTGCCTTCAAAACGCCACGTTATCACACGCTCGACATTACGGAACCGGCAAAGgTGTTCATACAGCTGAAGCGGCCTTCGGACGGTGTCACCAGCGAGAAATTGCCATTCGAATACAAGCCATTGGATTCAGGTAGGCATACATTGTGGAGTCTGCGTCGGAATCTTAAACGTAAACCCGACGaagatttatttcaacaaattctggCAGTCGACCAGCGCGCAAATGAAAGTGCCGCTGAGACTGCCGCCGTCGAGATTATAGATTTAGTTACGCCCACTAAAACCGAGGCACCAATAGCGCAACCCGCCAGCGATGTGTCGTCACAGGTAGTAGTAAGTGCACCAGCACAGAAGTGCAGCGAACAAGAGATCGACTTGATCATAAATGAGAAAGTNNNCTTGATCATAAATGAGAAAGTACGCGAATTAGAGGAACAGGCCTTGGCACAGCAGCAGGAGCAGGACGTGTCAAGCACGTCCATGCAGCATGATTGCACAACGCTAGCAACTAGCGAGGCAGCACAGCTGTCtgcaaatgataaaataaacGAGTggatgaaatcaaatgaaatacaacCAATGGAGACAAACGTTTCAAACGCAGAACAGCCCAATGAGGCGCTTGCAATGCCTATGTCACCAAACACAGCGGATGAGGACAAAACATTGAATGAGCTGTTGGAGCAAGTAGCGGAATTAGATGAGATCTATAGCGATCATGTGTTGCGACGtgacaattacaacaacacaattttaaatgagcTCAAAGACATGGACGCATGCTTGCCAGATGCCACACCACTGGCAGATGCCGAACAAACTGCTATGGAAATGGAGGAGCCATTTGATGATGCGGCGACCTATACCAGtttgcaaattgcttttaaaaacccTTTGGCATTACCAATTGAGGATGTTATGCCGCCGACGCCACCGGGCTCACATTGCGCGCCTGAGGATGCACAGCACTACGATCACGTCGAAGTGAACTCACAACACTGCGCACCGCAGAATGAAGTGCACAGCGGTGAACAGCTCGATGAGCCACCACCGCGGCCAGCACCACCCAAATTCAATTCGCCACACATGCATGTAACCGCCGCCGAGGAAGAAAAACTGCCCCCGCTGCCACCCAAACGCTTACGCAAGCAAGACAGCAACGCGGAAAATCGCTCCATTGAGGCCAATACATGCGACACCATGGAACGTCGGCCACGCAACACAGCGCCCATTATCATTATGAAGACGCCCGATCATTCGCCACCAACCAAACGTTTGCCACCGAAGCCTAACAGCGGCAACACGAACACATTGCCCAAACAAAAGAAGCCGGGCTtctttgccaaattattttccCGACGCAAGTCCAAGTCCGACCTTAGCCAGGCGCCCAGTGAGCAAGGCTCTGTCGCTGGCTCGAAAGCTAACTCAAAAACCGTTAGTCCGAATGCGAGTCGCGAGCCAAGCATAGGCAATTTTAAGATGAATGAATCGACGCGGGCGTCCATACGCTCTGCAAAATCGCTGCAACCAGCGGTGCTCAACAGCAATACGGACAAATCTACGGCAAAGGAGAAAACCACAAAACAAGGCAAGCCAGTGGGCCGCAGCGTAAGCAGCGTGTCAGGTAAACGGCCTGCTCACCTAAACGCCGACGTTATCCACATACCGCTGAAAGGTGACAGCGCCAGCAGCTTGCCACACAATGAAATTTACTCGCAGGCCAGCACTATAACGCTGGGCAATGCACTCGACCGCCGCACTGCCTCCGCCCTGCAGCTGGCCGAAATACCCATTAGCGATGGCAACATGGAGCTAGTCGCCATCACGGATCGCCAAAGTTTGCGCAATTTATGCGAGGGTGAATTCAATGTGCTGCTCGATCCCAATGTGGATCTTACAGAGGCTGAGCACTTTGCGCTGTACACCAGCATACCGCCACAAGCCACCGTCAGCGAGTTCGACGAAACATCGGCATACTACGCGCCCGTCGACGCCGGCGAAATACTAACGCCCGAGGAGGTGGCCAAGCGGCTAGCGGCTGCCAATCGTTTAATTTAG
- Protein Sequence
- MFQNQNSSGTVLGAGAANTMDPTQQQTMNYNGLQHQQAQQQGTPHHQQHQESKNVKNVRQKPYVKITEQPAGKALRFRYECEGRSAGSIPGVNSTPENRTYPTIEIVGYKGRAVVVVSCVTKDKPYRPHPHNLVGKEGCKKGVCTLEINSETMRAVFSNLGIQCVKKKDIEAALKAREDIRVDPFKTGFSHRFQPSSIDLNSVRLCFQVFMESEQXXXXXFMESEQKGRFTEPLPPVVSDPIFDKKAMSDLVICRLCTCSATVLGNTQIILLCEKVAKEDIAVRFFEEKNGQVVWEAFGEFQHTDVHKQTAIAFKTPRYHTLDITEPAKVFIQLKRPSDGVTSEKLPFEYKPLDSGRHTLWSLRRNLKRKPDEDLFQQILAVDQRANESAAETAAVEIIDLVTPTKTEAPIAQPASDVSSQVVVSAPAQKCSEQEIDLIINEKVXLIINEKVRELEEQALAQQQEQDVSSTSMQHDCTTLATSEAAQLSANDKINEWMKSNEIQPMETNVSNAEQPNEALAMPMSPNTADEDKTLNELLEQVAELDEIYSDHVLRRDNYNNTILNELKDMDACLPDATPLADAEQTAMEMEEPFDDAATYTSLQIAFKNPLALPIEDVMPPTPPGSHCAPEDAQHYDHVEVNSQHCAPQNEVHSGEQLDEPPPRPAPPKFNSPHMHVTAAEEEKLPPLPPKRLRKQDSNAENRSIEANTCDTMERRPRNTAPIIIMKTPDHSPPTKRLPPKPNSGNTNTLPKQKKPGFFAKLFSRRKSKSDLSQAPSEQGSVAGSKANSKTVSPNASREPSIGNFKMNESTRASIRSAKSLQPAVLNSNTDKSTAKEKTTKQGKPVGRSVSSVSGKRPAHLNADVIHIPLKGDSASSLPHNEIYSQASTITLGNALDRRTASALQLAEIPISDGNMELVAITDRQSLRNLCEGEFNVLLDPNVDLTEAEHFALYTSIPPQATVSEFDETSAYYAPVDAGEILTPEEVAKRLAAANRLI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -