Basic Information

Insect: Ephialtes manifestator
Gene Symbol: -
Assembly: GCA_963970395.1
Location: OZ019980.1:26047222-26050875[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.0028 0.53 12.2 0.3 1 20 141 160 141 161 0.96

2 13 0.012 2.3 10.2 4.6 2 23 301 323 301 323 0.91

3 13 3.9e-05 0.0074 18.1 1.1 2 23 378 400 377 400 0.95

4 13 6.9 1.3e+03 1.6 7.6 3 23 487 508 486 508 0.95

5 13 0.36 68 5.6 0.2 1 23 558 581 558 581 0.95

6 13 0.0043 0.82 11.7 0.3 2 23 629 651 628 651 0.95

7 13 0.0045 0.85 11.6 0.3 3 23 676 697 674 697 0.93

8 13 0.009 1.7 10.7 3.6 2 23 762 784 761 784 0.96

9 13 0.017 3.2 9.8 2.4 3 23 799 820 797 820 0.94

10 13 0.00046 0.088 14.7 0.1 2 23 865 887 865 887 0.93

11 13 0.15 28 6.8 1.6 1 23 967 989 967 989 0.98

12 13 0.00041 0.077 14.9 2.1 2 23 1003 1024 1002 1025 0.95

13 13 0.07 13 7.8 1.2 1 23 1099 1122 1099 1122 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.0028	0.53	12.2	0.3	1	20	141	160	141	161	0.96
2	13	0.012	2.3	10.2	4.6	2	23	301	323	301	323	0.91
3	13	3.9e-05	0.0074	18.1	1.1	2	23	378	400	377	400	0.95
4	13	6.9	1.3e+03	1.6	7.6	3	23	487	508	486	508	0.95
5	13	0.36	68	5.6	0.2	1	23	558	581	558	581	0.95
6	13	0.0043	0.82	11.7	0.3	2	23	629	651	628	651	0.95
7	13	0.0045	0.85	11.6	0.3	3	23	676	697	674	697	0.93
8	13	0.009	1.7	10.7	3.6	2	23	762	784	761	784	0.96
9	13	0.017	3.2	9.8	2.4	3	23	799	820	797	820	0.94
10	13	0.00046	0.088	14.7	0.1	2	23	865	887	865	887	0.93
11	13	0.15	28	6.8	1.6	1	23	967	989	967	989	0.98
12	13	0.00041	0.077	14.9	2.1	2	23	1003	1024	1002	1025	0.95
13	13	0.07	13	7.8	1.2	1	23	1099	1122	1099	1122	0.97

Sequence Information

Coding Sequence: ATGGCGTCCACAGTGGCCCGAGAGCAGTCGGGTATGCTGATCGAGCAACACGTCAGTGAGATCGACAGCGAGAGTTCGAGCGGAGGTGAGGACCGCGACGCGAGAAAGCGATTGCGGGAAGATGCGGACAACAACAGTACAGGCAGCAGTCCGAAGAAGCGCAGAAAACAAACGACACCGGTAAGATTTCCAACAACGCTGGTGAGCAGCAGCGAACGAGCCGATTCCGAGGACGACGAAAACGACATTGACGAAGATCCTGTTGAGCCGGAAGAGGCAACGATGCTTCCGGTCGACGAGGAAGGTCAACTGCTGCTGGAAGGTAAGCCACGAACGCTATCGCCGCAGGCGTTTATCCGAAATATCCTGGAAACAGCGACAACCACAACGACAACAAAAGACGAGAATCTTAACAGCGAATTTCGTTGCCAATTCTGCGGTCTGTCATTCGACGGCAAAGACACACTCGATCGCCATCTAGAGTGCGAACACGGCGTTTCTAATAATTCGTTTAAACAAGCGTCGTTACAAGTGGCGGCAAATGGCTCGCCACTTTCCGGTCAGGTTAGAGTTAAGATTGAACCACCGCAACAATCGCTAGAAGAATCCGAGAGTCCTGTCAATTTAACGGGTTTGGGTATCAAGAGTTTTGCCGCCACTTGGCTCAATTCCCAAGCTCAGGCACAACACCAATTGCAATCCCAATCGCAGTCTCAAAATGCAGACGAGTGGCCCTCAGCCAGTCCCACAACTTCCGTCCCCAATCATCTTCAAGCACTCACATTTCCTGGCGCACTGGCTCAGTACCTTCCGTTACCGGCGTTTTCACTCACCGACGCTGGACAACTTCCCCGTCCACCCGTCGGCCCAGCGCCCGTTAGGATCTTCAATCCCGACGCTTACTGCGATCTTTGCAACAAGGAATTCTGCAACAAATACTTCCTCAAGACGCACAAGGCCAACAAACACGGAATATACGTTGACGCCCCGACCCAGAATCCTGGCGACAATAACATTGCTGGCAACTTGTTCGCCGGAGCATTTGCACCGGGTAACGTCAAAATGGAACAGCCACCTCAGAGACTCGAAGTCCCAGCTCCGCTTGTTTCTGTACCTTTGAACAATACCGTTCCCTGTGAACTTTGTCAGAAACGATTCAAGAACGAGGATTCACTGAGAAAACACAAACAGAAAGTTCACAACGACTCGATTGATCATCAGGAGTCACATTCCCTACCGGCTACGGGGAGCAGCGTGGACGAAGATCGGGATATGTCTAGGAATAGCCCgagcgctatggaggctttgtTCAAACAAGAATTCGGCGTGGAACAAGAAGATTCAAAGTTCATGCCAAGCCCTCGCCATCTCTCGCCGCAGTCCAGTCAACAGGCCAGGGACTCCGGATTCAACGCTGATAGACTCAGGAGACTTGGCGTCATCAATCCGGAAGCTTTCTGCGAGATATGTTGCAAGGAGTACTGCAACAAATACTTTCTGCGTACGCACAAGATGAAGCGCCACGGTATATACATACAGGATAACGAGAAGTCACCCAGCAATCCTGGAACTGCCGCGAGTTGGCATCAGATACAGACGAGTCCTCTGAACCTCATTGTCACTGACAGCAATGCCGGAAGTTCATCAGAATCGGGTGATCGTGGTGAAGACTTTGAGTGCAAGCCCTGCGGTATCCGTTTTCAAACGCTGGGTCTGCAAAAAGCGCATCGTGCAAAGATCCATGAGACTGAAGATCAGAAGTCTCCGAAAAACGATTATGAGCCAGAGTCGACGGATCAGCGAACCGATTCTATTTCAGAGGATCTACAAAAATTGCAGACAATGATTCTGCAACTTAATGGCCTGAATGCAAGCAAAACGTTGATCTGTAATGTATGTGGCAAAGAGTGCGAAAACGGAAATGCCCTTAGAAATCACATAACAATGGAACATGGCATGATAAGTGAAGACCTATCCGAACCTAGTCAACATAACGAGGCCTCTTCCAATGGAACCTCAACTTTCTGCACTCTATGCGACAAGGAGTATCAGACTCTAGATGCATTGAGACAACATATCACGGAGGAGCATCAACCCAACGCTAATAATACTACACCACCGATTCCTCAGTCTTCGGTAGTTTCAGCTGTGGTTCCAGTCCAACCTCCAACTCCAGTGATAACTTCTTCGGTGACAATACCTACACCTTCAACGGCTTCAGTTCCAACAGCGACTCCGCCTCAACCTGAAAGAAAAGTTATTTCCATGACGCCCACTTCGAGCTACTGCGAGATTTGCAACAAGGAACTATGCAACAAGTATTTCATGAAGACGCACATGCAACGAATGCACAATATCGAGATAGAAAATGGTTCTCAGATCGGTGGCGTAATTTGCAACATATGTAATAAGGAATTGTGCAGTAAGTATTTCCTCAGAGTGCACAAGCAGAACACACATGGTATTGTCGACGAGGGAAGCACTACGTCAAATAAACAGGAGTCCTATGAGCCTGCGACCAATGACGATTCGGCACTTAAACCCGATCAACTAGGAGACTTGAGCCATCGATACTTCACTCACTTCACGGAAGTCTGTCCGATCTGCAGTCGGAGATTCAGGAGTATAAAGTGGCTGAAGGCTCATCTTCTAGGCGAACATGGGAGACCTGGAATTGACAAATGGCGTGAAATGGAGCATCAATACCAGAATTCATCGAGAGGAGGCGTAAGATCATCCGGATCATCCAGCAGAGTTGGCCAACCGAATCAAACCATCAAAATTCCTAACGGACTTGATGTCCTGCAACAAATCAAGAACAATGATTACGTTGGGCTTGGAAATCAAGTTTTGTCGAGTCTCTTTGGTTCGTCGGTTGAGGAGCAACAGGCCAAAAACTATCGTTGCTCCTATTGCAGCTTCACAACGACCGTACTACcgtttttgtttcttcacgAAAGATCTCATACGAGTCCTCAAGAAAACAATCCTATGGAGAATTCTCTACAATGTCCAATCTGCTCGCAAGGTTTCGGGCAACCCGAACTCCTGCATCATCATCTACTGACACACCATCAGTTCTCCGGATTATTGTCACAGTTCCAAGCACCAATGATCAACAGTCCCAGATTGGAAGACGGAAATCTCGTGAGGAATAATGAGAACTATGATAAAagcgattttgatggaaaggaCGATCGTCACCAGGGAAGTCCACAAGTTTCAGGAAACTCGGAATCATTGAAGAGCCAGAAGTCTGACGAACAGGCGGTTCAGGTTACGCCTCAGGGAGCCTTTAAGTGCGCTCAATGCGGATATGCCACCGCGCATGTCAACAGGATAAGAAGACACATAAAAAAAGATCACAAGACTCTAGGAGATCCGACGGAAAGCGTCATTGACGAACTCAGCAAGACTCTGAGGGATGTGGCAAACAAACACAAATTACCGGCTAGTTACGCGATGCCTCAAGACATGAATTCAAATCCTGACGCCACTGTGATGCAACCTTTTCTTATCGAGGAACGTGACGTCACGAGAATGGGAGAAGAGGCTCCTGTGGAAAGACGCTTTGCACCTGCTCTTGTTTATCTGCCAGTGAGAGCCAGAGTCAACAATGTCCTGACCACATCCTTCACCCTCAGCCCCGCCTGA
Protein Sequence: MASTVAREQSGMLIEQHVSEIDSESSSGGEDRDARKRLREDADNNSTGSSPKKRRKQTTPVRFPTTLVSSSERADSEDDENDIDEDPVEPEEATMLPVDEEGQLLLEGKPRTLSPQAFIRNILETATTTTTTKDENLNSEFRCQFCGLSFDGKDTLDRHLECEHGVSNNSFKQASLQVAANGSPLSGQVRVKIEPPQQSLEESESPVNLTGLGIKSFAATWLNSQAQAQHQLQSQSQSQNADEWPSASPTTSVPNHLQALTFPGALAQYLPLPAFSLTDAGQLPRPPVGPAPVRIFNPDAYCDLCNKEFCNKYFLKTHKANKHGIYVDAPTQNPGDNNIAGNLFAGAFAPGNVKMEQPPQRLEVPAPLVSVPLNNTVPCELCQKRFKNEDSLRKHKQKVHNDSIDHQESHSLPATGSSVDEDRDMSRNSPSAMEALFKQEFGVEQEDSKFMPSPRHLSPQSSQQARDSGFNADRLRRLGVINPEAFCEICCKEYCNKYFLRTHKMKRHGIYIQDNEKSPSNPGTAASWHQIQTSPLNLIVTDSNAGSSSESGDRGEDFECKPCGIRFQTLGLQKAHRAKIHETEDQKSPKNDYEPESTDQRTDSISEDLQKLQTMILQLNGLNASKTLICNVCGKECENGNALRNHITMEHGMISEDLSEPSQHNEASSNGTSTFCTLCDKEYQTLDALRQHITEEHQPNANNTTPPIPQSSVVSAVVPVQPPTPVITSSVTIPTPSTASVPTATPPQPERKVISMTPTSSYCEICNKELCNKYFMKTHMQRMHNIEIENGSQIGGVICNICNKELCSKYFLRVHKQNTHGIVDEGSTTSNKQESYEPATNDDSALKPDQLGDLSHRYFTHFTEVCPICSRRFRSIKWLKAHLLGEHGRPGIDKWREMEHQYQNSSRGGVRSSGSSSRVGQPNQTIKIPNGLDVLQQIKNNDYVGLGNQVLSSLFGSSVEEQQAKNYRCSYCSFTTTVLPFLFLHERSHTSPQENNPMENSLQCPICSQGFGQPELLHHHLLTHHQFSGLLSQFQAPMINSPRLEDGNLVRNNENYDKSDFDGKDDRHQGSPQVSGNSESLKSQKSDEQAVQVTPQGAFKCAQCGYATAHVNRIRRHIKKDHKTLGDPTESVIDELSKTLRDVANKHKLPASYAMPQDMNSNPDATVMQPFLIEERDVTRMGEEAPVERRFAPALVYLPVRARVNNVLTTSFTLSPA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00414596; iTF_01497736; iTF_00343418;
90% Identity: iTF_01497736; iTF_00343418;
80% Identity: -