Basic Information

Insect: Ephialtes manifestator
Gene Symbol: gtf3a
Assembly: GCA_963970395.1
Location: OZ019981.1:23624903-23635042[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.00032 0.061 15.2 0.3 2 23 844 865 843 865 0.97

2 17 0.8 1.5e+02 4.5 0.3 1 19 871 889 871 890 0.84

3 17 5 9.5e+02 2.0 0.9 2 23 898 919 897 919 0.93

4 17 0.0011 0.21 13.5 1.8 3 23 928 949 927 949 0.98

5 17 0.012 2.3 10.3 1.5 1 23 956 979 956 979 0.94

6 17 0.00025 0.046 15.6 1.9 1 23 985 1008 985 1009 0.94

7 17 0.55 1e+02 5.0 0.2 2 23 1016 1036 1016 1036 0.94

8 17 1.7e-07 3.2e-05 25.5 2.1 2 23 1042 1063 1041 1063 0.97

9 17 2.7e-06 0.00052 21.7 0.2 1 23 1069 1091 1069 1091 0.99

10 17 0.0053 1 11.4 2.8 2 23 1103 1125 1102 1125 0.95

11 17 0.55 1.1e+02 5.0 2.6 1 23 1131 1154 1131 1154 0.92

12 17 0.14 26 6.9 1.9 5 23 1185 1204 1182 1204 0.92

13 17 0.0021 0.4 12.6 0.8 2 23 1211 1233 1210 1233 0.96

14 17 0.00015 0.027 16.3 1.6 2 23 1241 1262 1240 1262 0.96

15 17 0.0015 0.28 13.1 2.3 1 23 1268 1291 1268 1291 0.96

16 17 0.4 75 5.5 3.2 2 23 1298 1319 1297 1319 0.96

17 17 0.62 1.2e+02 4.9 1.9 1 23 1325 1347 1325 1347 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.00032	0.061	15.2	0.3	2	23	844	865	843	865	0.97
2	17	0.8	1.5e+02	4.5	0.3	1	19	871	889	871	890	0.84
3	17	5	9.5e+02	2.0	0.9	2	23	898	919	897	919	0.93
4	17	0.0011	0.21	13.5	1.8	3	23	928	949	927	949	0.98
5	17	0.012	2.3	10.3	1.5	1	23	956	979	956	979	0.94
6	17	0.00025	0.046	15.6	1.9	1	23	985	1008	985	1009	0.94
7	17	0.55	1e+02	5.0	0.2	2	23	1016	1036	1016	1036	0.94
8	17	1.7e-07	3.2e-05	25.5	2.1	2	23	1042	1063	1041	1063	0.97
9	17	2.7e-06	0.00052	21.7	0.2	1	23	1069	1091	1069	1091	0.99
10	17	0.0053	1	11.4	2.8	2	23	1103	1125	1102	1125	0.95
11	17	0.55	1.1e+02	5.0	2.6	1	23	1131	1154	1131	1154	0.92
12	17	0.14	26	6.9	1.9	5	23	1185	1204	1182	1204	0.92
13	17	0.0021	0.4	12.6	0.8	2	23	1211	1233	1210	1233	0.96
14	17	0.00015	0.027	16.3	1.6	2	23	1241	1262	1240	1262	0.96
15	17	0.0015	0.28	13.1	2.3	1	23	1268	1291	1268	1291	0.96
16	17	0.4	75	5.5	3.2	2	23	1298	1319	1297	1319	0.96
17	17	0.62	1.2e+02	4.9	1.9	1	23	1325	1347	1325	1347	0.95

Sequence Information

Coding Sequence: ATGATGAGCGCTTCGGGAGAAGCTGTATTAATTGGCGAGAATGAAGATCGTAATAATGCTCggaaaaattgcaatttaactAGCGAAGAGTCTCATGCTGCGCTTATTAAAGATCTCACTGAGGAGAGTATCGTCGTTTTGGATCCTCGTGTATGTAGTAACGAGCGACAGACGCAGGAACGTTCGACGGGATGTCATTTGCGAGGCAATTCTGTTGCTTCGGCTCAGAACACGGAAATTCAAGATTTAAACATTGTTGAACGTAAGACACAAGGCTCGATAGAGAAGGACGGCAACATTCGTCGTCGATCAGTACTAAATGCAGAGCGGCAGGATCACGATTATGGAGATTACAGGCGCAATGCGACTCCCACATCATCGGCAAGTACTGTCAAACAAAACGAGCGTCCAAAGACTAAAATCAAAGACACTTCAACGGAAGTGTCGGTGCTTCATCGTCCGGAGCTCAAAACATATCGCCCGAAAGAAAGTTCCATAACTCGCGTTAAGAATATTAACGAATTGAAGAAATTGACGCCAAAAGTCAAGTTAGTTTCTCCGGAGATCACGAATTTGTCGCAGTTGACAAAAATAAACGTTCAGAGTTCGAGTAAGGAAAACATAAGCAAAGAATCGAGCATCGAACTCTCTCGGAATCAGCTAAAAAATTACTGCCGCACTTGTGCGGGTCTCAAAGTACCGCTCGTTGATATTTTCAGCGAAAAGGGAATACAAATGCGTCTGAATCAACAGATCAAGCATTTGGAAGACATAAATCAAGAAGATAGTCTATCGACGCAAATGTGCATGGATTGCATTTGCGATCTAAAAAtgagttacaaatttttcatgCAGATCAAAAAAGCTCAGGTTAAATTACAGTCGATCCACACGTCGTTGCAGGCAACAATGACAGCGACTGCTAAATTGTCCGAGGACGAAAGATCAAAAACTTCCGGACTTCCCACGAAAAATCGTTCGAAGATATCAGAGCCCGAAAAACCACAAGTTTCCCCAATATTAGTCAGTCCCGTAGCCAAAGAAACTCCAATCGAAAATCCTGCTATTCCTCGAGTGAAAATCGAGCCACAAAACGAATTCACATTTCAATTGAGCGACAACGAGTCTATTGAAGAATTCGATCCGGAAGATCCGCTTTTACAACCTGCAGAAATTTCGGATGCTGCGGAATCTGAGCAGGAATGCCAGGAGATTACCGAACATTGGGAAAACCGAGAAAATCATTCCGAGGAATTGCAGCACGAAGATCATCCACAAATAATCGAGGAAAATAGTTCACCGGCTGTTAATACTCGCGGAAAATTAGCGAAAAGCAACGACGACAATCGAGATATTAATAAAACTGTATATCAGTACGACACGAATCTAAAAGCTTATATAAAAGTCGAACAGCCACCTGATGAAAATGATTTGGCGAGTTCCTCGGGGATAAACGCAAAATTACCAGAAGCAAATGATTACGGGCCGAATAACGATGTCACGCCTTCAAAACAGCCCAATATTCTTAAACGTAAAATTCCCATAAGGAAGGATTTTTTAGGGGAACCCGTGGCGAGCGGCAGTCTTTCGGAGTCGACGTTCGCCAGATCGGGTTTGAGAGACACAAAAAAGCCAAAATTAAACGTGGAAAACGCCGTTAATATAACAAAAGAAAATGAAGATGGTATTATGTACGTGACGGTTAAAGGCACTAAACCAAACGAGTTGCTGCttgtaaaagttaaaaaaatggataaaccGGAAAGcaagaaagatgaaaaaaagaaacagcCTGTTGTGCAAACCGACGTAACGCCTGTCGATAAGATACTCAAAAAAATACGAGAAGAGCCTCTTGCTACGAGAGACAAAGATTATTCAGCCAAACGTTCGAAGGCGCTTGATATTCGTGAGCAAATAATTGCCAATCAGATCGAGGAGTACAAGAAAAAACGTGAAAAGGTTTTGGGCGGTACAGCGGGTTTGCCAAATGCTTTGAAGTTTGAGGATGGCATGATACGATTTGTTAATCCAATTGATACGCCGTTCACGACCGAAGGTATCGTTAAAGTCGAGCCTAGCGAACAAGTCGAAGAAATTCGTCGAGTCGACAAAAACAGCGAGACGGAAAATGACGACGAGACGAAAAACGGAGGAAAGGAAAATTCCGATAGAACGAAATCCCctgtttattacaataatacTGGGGAATATCTTTCGCGATTGGCGAAACTCAAGAGAAAGTGGGAAGaagcgaagaagaaaaaagagtcTCTTCAACGCGAATTGGCGGAATCTTACACGGAGGGCAATCTCGAAAAACTCGGTCGAATACTCGGCGAGAAGGAGAAAAATCTTCGCGAATTTCAGGATTATCTTAAACAACGAAAAATCGTAATAACACGCTTGAAAGACGAGGATATAATATCACTCTACGAGGACCGAAACAACATGTCGGCAAAGAAAAATCTACCTGATCTCATAGACACTACAACGCCTGAGGATTATATAGCACTGGAAAATTATCTGGAGTGCGATTATTGCCCGGAAACTTTTGCCCTCTGCGATCTTCTCGAGGAACATTTGAAAACTCACGACTACAAACTCGTTTATTACTGCGAGGATTGTCAGGAAGAATTTCCGACCATAAAAGCTAAACGCAGTCACAATGTCAATTGTATGAAGAAACTTATATGTAAATATTGCGATTTGTTGCTGGATTCGAAGGGAAAAAAGCGGCAACACGAGCAGAAACACGTCGACAGTATTTACGGCCAATTGTGCGAGGTTTGCGGGGAGAAGTTTAAACACCAAGGAACTCTCGATCAGCACTTTAAGACCCAACACATGACGTGggaaaaaatatacgattgtccAAAGTGTCCGAAGAAATTTGCATTCAAGCAAAAACTCAGCTTTCACCTTAAATCCGTTCACACAAGTTTGCGTGCTTATCTTTGCGAGGATTGCGGAGCGGATTTTAAGAATCCAGCGAGTCTACGACATCACAGAATTCGAAAACATCATCCAACGGGAAACAAACGTGAATGTCCGGTTTGCAACAAACTCGTGCCTTTTTACAGCCTATCGAAACACATGTACACTCACAAAGCGTACACTATTCAATGTCCACACTGCGACAAAATGTTCAAGAACAGTTCGACGCTGAAGCAACACGTGAGAATTCACGAGGATCAGAGACAATACAGATGCGACACGTGTGGCGTTGGTTTTAATAGGCGCGACGGTTTGAGATTGCATATGCGAGTTCATCAAAAGACAGATAGTCGAGCGCTCAAAGAATGTTCCTGCCAAATATGCTCGGAAAAATTTCCCAATCATTCGATGCTGGTGATTCACAGAAATCGAGTTCACAAGGATGGAAGACAATACACTTGTCATATTTGCAATCGTTCGATGCTATCAACGAGATCACTCGAGTGGCACATGTCTCATATACACAACGAGGCTTTGCCCGATGCAAGTTTAGGCGGTGGAGGAGATAAAGACGAGGCTGAAAGTGCGCCGGAAAAAAAGCGAGTCGCTTGCATTCATTGCGACAAAACATTCAAGACCGAAATGATACTTAGAACACACATTAAAAATACACACATGGAAAAAGATCCTACGAAATGTCTCGATTGTGATCTTATGTTCACTTCGGATGTTAGATTGCGACATCATATGATGGTCGCTCATAATAGACTCGAGGGAACTTTGCCTTGTCCTCATTGCTCCAAACGCTTTGTCAATCAGCTTCGTCTCAAGACTCACATGATTTCTCACTCCGAGGATAGGCCTTATACCTGCGAAATTTGTGGGTTTAATCTTAAAACGAAGATACAATTGATAAAGCATCATCAGAATAGGCACAGCGATGAGAGACCTCTACAATGTCGATACTGTCCGTGGAGATGCAAACAAGTTAGTGCACTTGTTTGTCACGAGAGAACTCACACCAATGAGAGACCCTATTCTTGTATCGTATGCAGGCAAAGGTTTAAGTATCTTGGTGATAAAAACAAACACGAGAGGAGACACGAGAGCTTAGGGGGTTCGGGATTTAAGAGGATCGTCGCTGGAAGAAATTTGAAACAACCCAAGACTCTTCGTAACAATCAGGAGGACACTTCGACCTCCGATCAGGATCCTCTTGATTTTGAGAATCAGGATGATCAGGATGATGAACAATTTAACGAGGAACAAGAAGAGAAGTTTCACGAAGAACAGGAGGAACAGGAGCATATTGCAAAGTTCGATGAGTCTGACGAGATTGCGCAACAGTATGAACAATCTTACCAACAGGAGTACGAAGAAACATCGAGGGAAGCCTCGGAAGCTGCAGAAGTGATCATGAACATGGAAGACACGACGGTATACACGGAAGAAGTAACAGCGGATAATATTGAGACTGCCGAAATGATAACCGACGAGATAATGACAAATCAGATATTACAGTCTGGTACAGTCGTTCATCTTCAGCAGCATGACGATAACGGTAAAATCCAAGTGATACCCGTGATGCTTTCCTTGCCAGATCTCAGTGATTCAAGCGCGGAGGTCAATCTGGCCACCGCTTCGATAATGTATAATAACTGA
Protein Sequence: MMSASGEAVLIGENEDRNNARKNCNLTSEESHAALIKDLTEESIVVLDPRVCSNERQTQERSTGCHLRGNSVASAQNTEIQDLNIVERKTQGSIEKDGNIRRRSVLNAERQDHDYGDYRRNATPTSSASTVKQNERPKTKIKDTSTEVSVLHRPELKTYRPKESSITRVKNINELKKLTPKVKLVSPEITNLSQLTKINVQSSSKENISKESSIELSRNQLKNYCRTCAGLKVPLVDIFSEKGIQMRLNQQIKHLEDINQEDSLSTQMCMDCICDLKMSYKFFMQIKKAQVKLQSIHTSLQATMTATAKLSEDERSKTSGLPTKNRSKISEPEKPQVSPILVSPVAKETPIENPAIPRVKIEPQNEFTFQLSDNESIEEFDPEDPLLQPAEISDAAESEQECQEITEHWENRENHSEELQHEDHPQIIEENSSPAVNTRGKLAKSNDDNRDINKTVYQYDTNLKAYIKVEQPPDENDLASSSGINAKLPEANDYGPNNDVTPSKQPNILKRKIPIRKDFLGEPVASGSLSESTFARSGLRDTKKPKLNVENAVNITKENEDGIMYVTVKGTKPNELLLVKVKKMDKPESKKDEKKKQPVVQTDVTPVDKILKKIREEPLATRDKDYSAKRSKALDIREQIIANQIEEYKKKREKVLGGTAGLPNALKFEDGMIRFVNPIDTPFTTEGIVKVEPSEQVEEIRRVDKNSETENDDETKNGGKENSDRTKSPVYYNNTGEYLSRLAKLKRKWEEAKKKKESLQRELAESYTEGNLEKLGRILGEKEKNLREFQDYLKQRKIVITRLKDEDIISLYEDRNNMSAKKNLPDLIDTTTPEDYIALENYLECDYCPETFALCDLLEEHLKTHDYKLVYYCEDCQEEFPTIKAKRSHNVNCMKKLICKYCDLLLDSKGKKRQHEQKHVDSIYGQLCEVCGEKFKHQGTLDQHFKTQHMTWEKIYDCPKCPKKFAFKQKLSFHLKSVHTSLRAYLCEDCGADFKNPASLRHHRIRKHHPTGNKRECPVCNKLVPFYSLSKHMYTHKAYTIQCPHCDKMFKNSSTLKQHVRIHEDQRQYRCDTCGVGFNRRDGLRLHMRVHQKTDSRALKECSCQICSEKFPNHSMLVIHRNRVHKDGRQYTCHICNRSMLSTRSLEWHMSHIHNEALPDASLGGGGDKDEAESAPEKKRVACIHCDKTFKTEMILRTHIKNTHMEKDPTKCLDCDLMFTSDVRLRHHMMVAHNRLEGTLPCPHCSKRFVNQLRLKTHMISHSEDRPYTCEICGFNLKTKIQLIKHHQNRHSDERPLQCRYCPWRCKQVSALVCHERTHTNERPYSCIVCRQRFKYLGDKNKHERRHESLGGSGFKRIVAGRNLKQPKTLRNNQEDTSTSDQDPLDFENQDDQDDEQFNEEQEEKFHEEQEEQEHIAKFDESDEIAQQYEQSYQQEYEETSREASEAAEVIMNMEDTTVYTEEVTADNIETAEMITDEIMTNQILQSGTVVHLQQHDDNGKIQVIPVMLSLPDLSDSSAEVNLATASIMYNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00343376;
90% Identity: -
80% Identity: -