Basic Information

Insect: Clistopyga incitator
Gene Symbol: gtf3a
Assembly: GCA_947507545.1
Location: OX382178.1:6819832-6826661[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.00083 0.089 13.6 0.3 2 23 846 867 845 867 0.97

2 17 0.56 60 4.7 0.2 1 19 873 891 873 893 0.85

3 17 4.1 4.4e+02 2.0 0.9 2 23 900 921 899 921 0.93

4 17 0.00025 0.026 15.3 1.5 3 23 930 951 929 951 0.98

5 17 0.0098 1 10.3 1.5 1 23 958 981 958 981 0.94

6 17 0.0002 0.021 15.6 1.9 1 23 987 1010 987 1011 0.94

7 17 1.1 1.1e+02 3.8 0.2 2 23 1018 1038 1018 1038 0.91

8 17 1.4e-07 1.5e-05 25.5 2.1 2 23 1044 1065 1043 1065 0.97

9 17 1.5e-06 0.00016 22.2 0.3 1 23 1071 1093 1071 1093 0.99

10 17 0.0043 0.46 11.4 2.8 2 23 1105 1127 1104 1127 0.95

11 17 0.45 48 5.0 2.6 1 23 1133 1156 1133 1156 0.92

12 17 0.011 1.2 10.1 2.3 3 23 1185 1206 1184 1206 0.95

13 17 0.0017 0.18 12.6 0.8 2 23 1213 1235 1212 1235 0.96

14 17 0.00012 0.013 16.3 1.6 2 23 1243 1264 1242 1264 0.96

15 17 0.0012 0.13 13.1 2.3 1 23 1270 1293 1270 1293 0.96

16 17 0.33 35 5.5 3.2 2 23 1300 1321 1299 1321 0.96

17 17 0.51 54 4.9 1.9 1 23 1327 1349 1327 1349 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.00083	0.089	13.6	0.3	2	23	846	867	845	867	0.97
2	17	0.56	60	4.7	0.2	1	19	873	891	873	893	0.85
3	17	4.1	4.4e+02	2.0	0.9	2	23	900	921	899	921	0.93
4	17	0.00025	0.026	15.3	1.5	3	23	930	951	929	951	0.98
5	17	0.0098	1	10.3	1.5	1	23	958	981	958	981	0.94
6	17	0.0002	0.021	15.6	1.9	1	23	987	1010	987	1011	0.94
7	17	1.1	1.1e+02	3.8	0.2	2	23	1018	1038	1018	1038	0.91
8	17	1.4e-07	1.5e-05	25.5	2.1	2	23	1044	1065	1043	1065	0.97
9	17	1.5e-06	0.00016	22.2	0.3	1	23	1071	1093	1071	1093	0.99
10	17	0.0043	0.46	11.4	2.8	2	23	1105	1127	1104	1127	0.95
11	17	0.45	48	5.0	2.6	1	23	1133	1156	1133	1156	0.92
12	17	0.011	1.2	10.1	2.3	3	23	1185	1206	1184	1206	0.95
13	17	0.0017	0.18	12.6	0.8	2	23	1213	1235	1212	1235	0.96
14	17	0.00012	0.013	16.3	1.6	2	23	1243	1264	1242	1264	0.96
15	17	0.0012	0.13	13.1	2.3	1	23	1270	1293	1270	1293	0.96
16	17	0.33	35	5.5	3.2	2	23	1300	1321	1299	1321	0.96
17	17	0.51	54	4.9	1.9	1	23	1327	1349	1327	1349	0.95

Sequence Information

Coding Sequence: ATGAGCGCTTCGGGAGAAGCTATATCAAATGTCGAGGATGAAGATTGTATCGATACTCGGCAAAACTGCACTTTCACTAGCGAAGACTCTCATGCCGCGCTTATAAAGGATCTTACCGAAGAGAGTATCGGCGTCTTGGACGACGGAGTCTCTGCCGATCGACGAACGAACGAACCTTCCACAGGATGTCAATCCCGAGCCAATGCCGTTGCTGGTACTGCTCAGCAAACACAATTTCACGATTCCAATATCGTTCAACAAACAACACCCGGTTCAACAGGGAAGGAAGGTAATATTCGTCGTCGACCGATACTAAATACAGAGAGGCAAGATCATGACTATGGTGATTACCGGCGCAATGCGAATCCCGTTTCTTCGGCAAGTATCGTTAAACAAAACGAACGTTTAAAGCCTAAGAACAAACAAGATGCGTCAACGGAAGCGACGGGGCTTCATTCTTTGGAGTCCAAAAAAACATTTCGCCCGAAGGAAAGTACCGTAAGTCGCGTTAAAAATATTAACGAATTGAAGAAAGTAACGCCAAAAGTCAAGTTCGTAACTCCGGAGGTCACGAATTTGTCACAATTGGCAAAAATGAAGGTCGATAACTTGAGTACAGAAAACATCAGAAGGGAATCGAGCATCGAACTCTCTCGGAACCAGCTAAAAAACTATTGTCGCACCTGTGCGGGTCTCAAAGTACCGCTCGTCGATATTTTTAGTGAAAAGGGAATACAAATGCGTCTCAATCAACAGATTAAGCATTTGGAAGAGATAAGCCAAGAAGACAGCCTTTCGACGCAAATGTGCATGGACTGCATTTGTGATCTAAAAATGAGTTATAAATTTTTCATGCAGATAAAGAAAGCTCAGGTGAAATTGCAGTCAATTCACTCGTCGTTGCAGGCAACAATAACAACGATTGCAAAATTACCCGAGGACGAAAGATCAAGAAGTTCCGGACTTGCAACTAAAAATCGTTCGAACAAATCCGAGCCCGAAAAATTGCAAGTTTCACCGTTGTTAGTCAGTCCTGTAGCCAAAGAAACTCCCATCGAAAACACCGCTGAAACTCGAATTAAAGTCGAGCCGCAAACCGAATTCACATTTCAATTGAGCGACAACGAATCGATTGAAGAATTCGATCCCGAGGATCCGCTTCTACAACCCGAGGTAATTTCCGACACTGTGGAATCTGACGCAGAGTGCAAAGTAATTCCCGAACAATCGGAAAATAGAGAAACTCATTCTGAGCAATCGATGGGAAAAGACCATGTACAAACAGTCAGGGACAGCGGCGCATCGACTTTAAGTTATCGCGCTAAATTAGCGAAGAATAACGAGGACTCGAATCGAGAGATTAATAAAACGGTATATCAGTACGATCCGAATCTAAAAGCTTATATAAAAGTCGAGCAGCCGATGGACGAAATGGATTTGCCGAGTTCATCGCTGGTAAAACCGAAAGTACCCGAAATAACCGATCCCGGATCGAATAACGATATCACGCCTTCCAAACAACCCAATATTCTTAAACGTAAACTTCCTACGAGGAAGGATTTTTTAGGGGAACCCGTGGCGAGCGGCAGTCTATCGGAGTCAGCGTTCGCCAGAGCGGGTTTGAGAGACATAAAAAAGCCAAAATTAAACGTGGAAAACGCAGTTAACATAACCAAGGAAAACGAGGATGGTATAATGTACGTGACTGTTAAAGGCACCAAACCAAACGAGTTGCTCCTTGTAAAAGTGAAAAAGATGGATAAAACGGAGGGCAAGAAAGATGAGAAAAAGAAACAGCCTGTGGTGCAAGCCGATATTACGCCGGTCGATAAGATACTCAAAAAAATACGAGAAGAGCCTCTCGCTACGAGAGACAAGGATTATTCGGCGAAACGTTCGAAGGCCCTTGATATTCGTGAGCAGATAATTGCCAATCAGATCGAGGAGTACAAGAAAAAACGAGAAAAGGTTTTGGGCGGTACGGCGGGTCTGCCGAACGCTTTGAAGTTCGAGGATGGAATGATACGCTTTGTGAACCCAATCGATACGGGCTTCACGAACGAAGGCATCGTTAAAGTTGAGCCCAGCGAATCAATCGAAGAAATTCGTCGTGTCGATCGAGACAGCGCCACGGAGAATGACGACGGGTCGAAAAACGGGGGAACAGAGAATTTGGATAATACGAAATCGCCGGTATTTTGTGATAATACTGGGGAGTATATTTCCCGGCTGGCGAAACTCAAGAGAAAGTGGGAGGAAGCGAAGAAGAAGAAAGAGTCACTGCAACGGGAATTGGCTGAATCTTACACAGAGGGTAATCTCGAAAAACTCGGTCGAATACTCGGCGAGAAGGAAAAGAACCTTCGTGAGTTTCAGGATTACCTTAAACAGCGAAAAATCGTAATAACGCGCTTGAAAGACGAGGACATAATATCACTGTACGAGGACCGAAACAATCAGTCTGCAAAGAAAAATTTGCCTGATTTAATAGACGCTACAACGCCTACGGATTATATAGCACAGGAAAATTATCTCGAGTGCGATTACTGCCCAGAAACTTTTGGTCTTTGCGATCTTCTCGAGGAACATTTGAAAACTCACGATTACAAACTCGTGTATTACTGCGAGGATTGTCAGGAAGAATTTCCGACAATAAAAGCGAAACGCAGTCACAATGCGAGTTGCATGAAGAAGCTTATTTGCAAATATTGCGATTTGTTACTCGACTCGAAAGGGAAAAAACGGCAACACGAGCAGAAACATGTCGACAGTATTTATGGCCAATTGTGTGAAGTGTGCGGGGAGAAGTTCAAACACCAAGGAACTCTCGATCAGCACTACAAGACTCAACACATGACGTGGGAAAAAATTTACGACTGTCCCAAGTGTCCGAAAAAATTTGCTTTCAAGCAGAAACTCAGCTTTCACCTTAAATCCGTTCACACGAGTTTACGAGCTTATCTTTGCGAGGATTGTGGAGCGGATTTTAAGAATCCGGCGAGTCTCCGACATCACAGAATCAGAAAGCATCATCCAACCGGAAACAAACGGGAATGTCCGGTTTGCACCAAACTCGTGCCTTTTTACAGCCTCTCGAAACACATGTACACCCATAAAGCCTACACTATTCAATGTCCGCACTGCGACAAAATGTTTAAGAACAGCTCGACGCTTAAGCAACACGTGAGAATTCACGAGGATCAGAGACAGTACAAATGCGACACGTGCGGCGTTGGTTTCAACAGACGCGACGGTCTGAGATTGCATATGCGGGTTCATCAGAAGACCGACAGTCGAGCGCTTAAGGAATGCTCCTGTCAGATATGCTCCGAGAAATTTCCTAATCATTCGATGCTCGTTATTCACAGAAATCGGGTTCACAAAGATGGACGACAGTACACTTGTCATATTTGCAACAGATCAATGCTATCGACGAGATCGCTCGAGTGGCACATGTCTCATATACACAACGAGGCATTGCCCGATGCAGGATTAGCCGGAGGAGGAGATAAGGATGAGGCTGAGGGCACGCCAGAAAAAAAGCGAGTCGCTTGTCTTCATTGTGACAAAACTTTCAAGACCGAAATGATACTTCGGACTCACATTAAAAATACACATATGGAGAAAGATCCAACGAAATGTCTCGATTGCGATCTCATGTTTACTTCCGATGTTCGATTGCGACACCATATGATGGTCGCTCACAATAGACTCGAAGGAACCTTGCCATGTCCTCATTGCTCCAAACGCTTCGTCAATCAGCTTCGTCTCAAGACTCATATGATTTCTCACTCCGAAGATAGGCCTTATACCTGCGAAATTTGTGGCTTCAATCTTAAGACGAAGATACAATTGATAAAGCATCATCAGAACAGACACAGCGACGAAAGACCGTTACAATGTCGCTACTGCCCGTGGAGATGCAAACAAGTCAGCGCCCTTGTTTGTCACGAGAGAACTCATACCAATGAGAGGCCGTATTCTTGTATCGTATGCAGACAAAGATTCAAGTATCTCGGTGATAAGAACAAGCACGAAAGACGCCACGAGAGCTTAGGGGGCTCGGGATTCAAGAGAATTGTTGCCGGAAGAAATTTAAAACAGTCCAAGACTCTTCAGAACAATCAGGAGGAGACTTCGACTTCCGATCAGGATCCTCTTGATTTCGAGAATCAAGAGGATGACGATCAATACATTGAGGAACAAGAAGAGAAGTATCACGAAGAGCAGGAGGAACAGCATATCGTAAAGTTTCACGAATCTGACGAGATTGCTGAACAGTACGAACAATCATACCAACAGGAGTACGAAGAAACATCGAGGGAAGCTTCGGAAGCTGCAGAGGTTATTATGAACATGGAGGACACAACGGTATATACTGAGGAAGTAACAGCGGATAATATTGAGACTGCGGAAATGATAACCGACGAGATAATGACAAATCAGATACTGCAGACTGGTACTGTCGTTCATCTACAGCAGCAAGACGATAACGGTAAAATTCAAGTGATACCAGTGATGCTTTCCTTGCCAGATCTCAGTGATTCAAGCGCGGAAGTCAATCTAGCCACTGCTTCGATAATGTATAATAACTGA
Protein Sequence: MSASGEAISNVEDEDCIDTRQNCTFTSEDSHAALIKDLTEESIGVLDDGVSADRRTNEPSTGCQSRANAVAGTAQQTQFHDSNIVQQTTPGSTGKEGNIRRRPILNTERQDHDYGDYRRNANPVSSASIVKQNERLKPKNKQDASTEATGLHSLESKKTFRPKESTVSRVKNINELKKVTPKVKFVTPEVTNLSQLAKMKVDNLSTENIRRESSIELSRNQLKNYCRTCAGLKVPLVDIFSEKGIQMRLNQQIKHLEEISQEDSLSTQMCMDCICDLKMSYKFFMQIKKAQVKLQSIHSSLQATITTIAKLPEDERSRSSGLATKNRSNKSEPEKLQVSPLLVSPVAKETPIENTAETRIKVEPQTEFTFQLSDNESIEEFDPEDPLLQPEVISDTVESDAECKVIPEQSENRETHSEQSMGKDHVQTVRDSGASTLSYRAKLAKNNEDSNREINKTVYQYDPNLKAYIKVEQPMDEMDLPSSSLVKPKVPEITDPGSNNDITPSKQPNILKRKLPTRKDFLGEPVASGSLSESAFARAGLRDIKKPKLNVENAVNITKENEDGIMYVTVKGTKPNELLLVKVKKMDKTEGKKDEKKKQPVVQADITPVDKILKKIREEPLATRDKDYSAKRSKALDIREQIIANQIEEYKKKREKVLGGTAGLPNALKFEDGMIRFVNPIDTGFTNEGIVKVEPSESIEEIRRVDRDSATENDDGSKNGGTENLDNTKSPVFCDNTGEYISRLAKLKRKWEEAKKKKESLQRELAESYTEGNLEKLGRILGEKEKNLREFQDYLKQRKIVITRLKDEDIISLYEDRNNQSAKKNLPDLIDATTPTDYIAQENYLECDYCPETFGLCDLLEEHLKTHDYKLVYYCEDCQEEFPTIKAKRSHNASCMKKLICKYCDLLLDSKGKKRQHEQKHVDSIYGQLCEVCGEKFKHQGTLDQHYKTQHMTWEKIYDCPKCPKKFAFKQKLSFHLKSVHTSLRAYLCEDCGADFKNPASLRHHRIRKHHPTGNKRECPVCTKLVPFYSLSKHMYTHKAYTIQCPHCDKMFKNSSTLKQHVRIHEDQRQYKCDTCGVGFNRRDGLRLHMRVHQKTDSRALKECSCQICSEKFPNHSMLVIHRNRVHKDGRQYTCHICNRSMLSTRSLEWHMSHIHNEALPDAGLAGGGDKDEAEGTPEKKRVACLHCDKTFKTEMILRTHIKNTHMEKDPTKCLDCDLMFTSDVRLRHHMMVAHNRLEGTLPCPHCSKRFVNQLRLKTHMISHSEDRPYTCEICGFNLKTKIQLIKHHQNRHSDERPLQCRYCPWRCKQVSALVCHERTHTNERPYSCIVCRQRFKYLGDKNKHERRHESLGGSGFKRIVAGRNLKQSKTLQNNQEETSTSDQDPLDFENQEDDDQYIEEQEEKYHEEQEEQHIVKFHESDEIAEQYEQSYQQEYEETSREASEAAEVIMNMEDTTVYTEEVTADNIETAEMITDEIMTNQILQTGTVVHLQQQDDNGKIQVIPVMLSLPDLSDSSAEVNLATASIMYNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00653081; iTF_01497689;
90% Identity: -
80% Identity: -