Eman006067.1
Basic Information
- Insect
- Ephialtes manifestator
- Gene Symbol
- ZFX
- Assembly
- GCA_963970395.1
- Location
- OZ019968.1:35695920-35700971[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 1.5 2.8e+02 3.7 0.1 3 23 16 36 15 36 0.94 2 14 0.0031 0.59 12.1 0.6 2 23 1031 1053 1030 1053 0.95 3 14 0.0038 0.72 11.8 0.1 2 23 1066 1087 1065 1087 0.97 4 14 2.9e-05 0.0055 18.5 1.4 2 23 1090 1111 1089 1111 0.97 5 14 0.0082 1.5 10.8 0.3 1 23 1117 1139 1117 1139 0.95 6 14 2.9e-05 0.0055 18.5 4.5 2 23 1146 1167 1145 1168 0.95 7 14 0.13 25 7.0 3.7 5 23 1181 1199 1180 1199 0.97 8 14 2.6e-05 0.005 18.6 1.5 3 23 1206 1227 1205 1227 0.97 9 14 0.015 2.8 10.0 0.5 2 23 1243 1263 1242 1263 0.97 10 14 7.9e-05 0.015 17.1 0.7 1 20 1269 1288 1269 1291 0.92 11 14 9.9e-05 0.019 16.8 2.7 1 23 1299 1321 1299 1321 0.99 12 14 0.0028 0.52 12.3 3.2 1 23 1327 1349 1327 1349 0.97 13 14 5e-06 0.00095 20.9 3.9 1 23 1355 1377 1355 1377 0.99 14 14 0.00036 0.068 15.1 7.2 1 23 1383 1405 1383 1406 0.96
Sequence Information
- Coding Sequence
- ATGGATATCGGCGGCGTAACGGGTACTGGCGGTGGCTCGGTCGCCTGTCCCGTTTGTACCCTCTACTTGCGAGAGGGCATCAGCCTCCAGCGGCATTTGGACACTCATCCCAAAGAACAGGTTATAGAGGCACTAATTAAAGCAAGTTCAACACCAACCCCATCCCCAACCCCAACTCCAACCCCACCGATTCCGCCGACGATACCGCCCGCCCCAAATACACCGCAGACACCCCAACATCAGGTTAATCCGGGCGCTCAGATACCTGCTCAATCGCCCTATCCCATGGGACCTGTCTTTGAGTGTCCACCCATTAATACCATGATGCCGCCTCAATTTGCCTCGTTCAGTTATCAGCAATTCGTCAACAACGGCACCATGATGATACCCCAATACGCCATGGCGCCTCAGGCCAATCAAATGATGCAGATGCTTTACAATCCTTACGGAATGTATCAGCAGCAACAGATACCCACCGTCCAAATGATCTCGCCCATCACTACTATTCCTACCACTAGAATCAGACCCGTTGTTACTGTCGCAAGCGAGGTCAGTCCCAGAAGCGTTATCATACCTAACGGAGCTGCTGAGCCCAAACAGATATCTAACGAATTGCTCTCCGAGCCTGAGGCTGAAAGAATCCTACCGGATATAGAACTTTCTACTACTCCTGTTCCTTCGGAGGATGAGATTTTGCCATCGAGGCACGATTCCGATGAGACTGGCGTTCATCAGGAACACAGGGAACAGCAGATGCAAAATGGTCTCATTCAGAGGATGAACAACGAGCGTCAGGAGTATCAGAACTCTCAGCATTCCGATGGTGATAATTGCAAAACTGGCAACAGCGAGGTGGATGAAGCTGAGAGTATATTGCCCGATGTCGTGGAGAGGGACACACATATAGACACACAAGTACAATGTAAAACTATAGAGTTTGAGGAACACGAGAGCAGAGAGTTTCCACAGGGTTACGAGAGCGAGATGGAAAAGAGCGGGACTAACGAGCGTGAAATCGAGAGAGACGAGGCTGAGGCGATTAAACTTGAGAGAGAGCACACTATGGAGAATCGGGAATGCCAGGGCGAGTCTATGGCTTCGCAGCAGCAACGCGAGCAGGAAAAAATGAAGGAAACTGGCGAACCGGAAGTCGAGCAGCTCGAACATCTGCTCATTGCGGTTATGGAGTCGGGATTCGAAAATGGGCGCTCTAAGAACTCCAAGGAAGAGACGAAGAAGGCGGAAGAGGAGCAAGAGCGGTCGCCGGTCGAAGATTCAGCGAATATGGACGCAGAAACCCAAGACAAGAACGAGGAAACGAGCAAAATGTATACCGAAGAATTGCAGGACGAAACGCCCTGCAAAAGTATGAACGAGAGTGGCGAGAGCGTCGAGAGCATCGAGGAACTCGACAGCAATCCTAATCATACATATCGGTATAGATGTAGCGTGTCCGCTCCTGCCTCGCCTGCACCGAAAAAACTTTACAGAACTTACTCCATGAGGTCCGAATACGGATCCAACGAGAATCTCAATTTCTATCCCGCTGGATTCGACGCTGCGACTCTGCATGATGCTGAGGACGAGGAGATGAAGACAATGGAGGATAATCTGGACGAGGAGGACATGGAGATCGAGGAAATCGCCAGTCCGCATACGCCTTTTGTTAAACAAAACGATGCTCGCGATCGCGTTAGATCGCATAGTCCTGCGTCCGCGATAAGCGGCATTTCCGGTCTACGGGTACAGAGCGATCGAAGCAAAGCCTGCTCGCCTTCTTCCGTTCACGGTTTCCAGCCAATGGACaccgaagaagaggaagaagacgaaCGACAACAGCGGCAACAACGGCAACAGCATAAACAGGAACAGgatgaagaggaggaggaggaggaagaggaacaagaggaagaggaagaagaagacgagGATGACGAAGAGGACGAAGAGGATGAAGAAAGCAACGATTCTGTTGATTTGTCGATGAAGAAACATCCCGTTGATTCTTCGCGAAACGAGCAAAAGTCTAAGCCAAATGTGCTGGAAACAAGTCCCGCGGAAAGCCTTGAAAGAAAATTCGATTCTAATCAGATTTATCACCAATCGGTGATCACTGAACATGTTAGCTCGTTTCCTACGATAAACTCGCAACAACCTTTGATTATACACGAGAGTTATTCGGTTTCGAGCAATAAATCGACGCATAATAATCTTCTGAATCTCTCGGAACTCGTTGATCCAACGACCAGCGCCGAATCCAGGAGCTTTCAGGCCGCTAAGACAATTCATCATTTGCCCTCGACGGAGCTTCTCAATATTAATGAAGACGCTCATGCCGGGCCGATGAATGTCTTTGAATTCGACGGACTTCAAATTTTAGTTCCTAGTACATTCATAAGCGAATCTTCCCAGAAAGCCATCAGCGCTACCAGCCAACAATCGATGGCCAGCAGCGAAGGAGGCGCCGGAATCGACGAGGAGGTCAAGAGCGTCAATATGCGGGCCGATGAGACGATGCCACCGCGCGGTGAACTTTCCGAACAAGAGAGCAATGGCTGTACTGAACCTTCTGCCTGGCAGctTTACATGGGCCAAGAATCGTCACGCATGTCGACGTCTTACGACCTCATGGCTCGCGAGAGTTGGGAAGAGTCGGAGGGTTCCGACAACGAGGTAGGAGTGCCGCTGTTGGACAGCAGATCACTAGCGACGCATTTCACATCGAGTCTGTTCCTGGATCGAGACCGAAAAACGCCGACGAAGAGAACCTTCAAGTGTTCCCACTGCGTAGAGGTCTTCGATTGTCCTAAAGAGCGACGTGTGCACAGCACGACGGTACACAAGGAGGCGGGACCGAGCAGCAGTAACGATCCCACCGAACAGTCTGAAGCGAAGGACATAAAGCTCCTGGACGGTCGTATGAACGCCTTCGACGATATTTTCGTTTCCGGAATTCACGTTCAACAAACTTATCATCACCAGCAGCCACTGCTGCATCAACTGCAGCCTCCACAGCAGCCGGACGACGCGAAAGCCGACGGCGATCAGAAGATCGACGGTATCGCGAGTATTCctcaaaatttggaaatttcgtGCGCAATGTGCAGTCAACGTTTCAGCAGCGAGAGATCTCTTCAGGTTCACAACAGGCGAGTTCACGGCACCGAAGTCGCTCGACGACTTCaggaaatttcaaaatgccaGATCTGCAACGAGGAATTTCCCTCGGTGATGCTTTTCAATGCTCATCTTAAGATTCATCCCCTCGAGTGCGCCCAGTGCGGCAAATACTTCTACAGAAAGCCCAATTTCAAGCTCCACATGAAGCGTCATCTCGGTATAAAGCCATTTCCATGCACGATATGCGACAAAGCATTCCTCACTAAGCAAAAGCTCGACGAACACACCAACGGTCACACCGGCAACGCTCCGGTTAAGTGTAATTTATGCAACGAGACTTTTCGTAGATATTCTAATTTAACGCAGCACAAGAATAGACATCATCTTAATATTAAGCGCAAACTCAAGGACTACATCTGCCACTGTGGCGAAGTTTTTCATACGAAGAAAAAGCTCGCTTGGCACAAAGAAACACACGACGAGAAACCAAAGGCTTGCACTTACTGCAACGAGAGGTTCATACACATGGCTAGCTTAACGCGACACATGAGACGCGCTCACAATCGCAGATTCGTGCCTGACGCTCAGCGCGAAAGCGAAAACGTCGAGTGCCCCATTTGTAAGTGCATATATCTCAGATCCTCGCTTTCCGTTCACATGCGCGTTCACAACGGCGAACGACCTTACGAGTGCCAGGTTTGCTCCAAGGCCTTTAGCACCAAATGGAATTTGCAATTGCACAAATGGACCCACGCGGCGCGCAGCACAAAACCCTTCAAGTGCAATCAGTGCAGCGCGGCGTTTTATCGACACAGCGATTATACCGCTCACATGAATTCACATCGCAACGTACGGCCCTACACGTGCAACTATTGCGGCGCTCAGTTCATTAGGAAGTACAATTGTCTTCGACACGTTAAGGAACACGAGGAAAATAAGGCGTACACGTGCGACGTTTGCAACAAGACTTTTCATCGTTCTTACTATCTCAAAGAACACTTGAGAGTTCACTCCGGCGCGAGACCCTACACTTGTCATATTTGCGGCAAATCCAGTAGCACCAAGTCCAATCACAACAAACACGTTAGAATTCATCACGCGCGGGAGCCTGTTAATACAGAGAATTAA
- Protein Sequence
- MDIGGVTGTGGGSVACPVCTLYLREGISLQRHLDTHPKEQVIEALIKASSTPTPSPTPTPTPPIPPTIPPAPNTPQTPQHQVNPGAQIPAQSPYPMGPVFECPPINTMMPPQFASFSYQQFVNNGTMMIPQYAMAPQANQMMQMLYNPYGMYQQQQIPTVQMISPITTIPTTRIRPVVTVASEVSPRSVIIPNGAAEPKQISNELLSEPEAERILPDIELSTTPVPSEDEILPSRHDSDETGVHQEHREQQMQNGLIQRMNNERQEYQNSQHSDGDNCKTGNSEVDEAESILPDVVERDTHIDTQVQCKTIEFEEHESREFPQGYESEMEKSGTNEREIERDEAEAIKLEREHTMENRECQGESMASQQQREQEKMKETGEPEVEQLEHLLIAVMESGFENGRSKNSKEETKKAEEEQERSPVEDSANMDAETQDKNEETSKMYTEELQDETPCKSMNESGESVESIEELDSNPNHTYRYRCSVSAPASPAPKKLYRTYSMRSEYGSNENLNFYPAGFDAATLHDAEDEEMKTMEDNLDEEDMEIEEIASPHTPFVKQNDARDRVRSHSPASAISGISGLRVQSDRSKACSPSSVHGFQPMDTEEEEEDERQQRQQRQQHKQEQDEEEEEEEEEQEEEEEEDEDDEEDEEDEESNDSVDLSMKKHPVDSSRNEQKSKPNVLETSPAESLERKFDSNQIYHQSVITEHVSSFPTINSQQPLIIHESYSVSSNKSTHNNLLNLSELVDPTTSAESRSFQAAKTIHHLPSTELLNINEDAHAGPMNVFEFDGLQILVPSTFISESSQKAISATSQQSMASSEGGAGIDEEVKSVNMRADETMPPRGELSEQESNGCTEPSAWQLYMGQESSRMSTSYDLMARESWEESEGSDNEVGVPLLDSRSLATHFTSSLFLDRDRKTPTKRTFKCSHCVEVFDCPKERRVHSTTVHKEAGPSSSNDPTEQSEAKDIKLLDGRMNAFDDIFVSGIHVQQTYHHQQPLLHQLQPPQQPDDAKADGDQKIDGIASIPQNLEISCAMCSQRFSSERSLQVHNRRVHGTEVARRLQEISKCQICNEEFPSVMLFNAHLKIHPLECAQCGKYFYRKPNFKLHMKRHLGIKPFPCTICDKAFLTKQKLDEHTNGHTGNAPVKCNLCNETFRRYSNLTQHKNRHHLNIKRKLKDYICHCGEVFHTKKKLAWHKETHDEKPKACTYCNERFIHMASLTRHMRRAHNRRFVPDAQRESENVECPICKCIYLRSSLSVHMRVHNGERPYECQVCSKAFSTKWNLQLHKWTHAARSTKPFKCNQCSAAFYRHSDYTAHMNSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEENKAYTCDVCNKTFHRSYYLKEHLRVHSGARPYTCHICGKSSSTKSNHNKHVRIHHAREPVNTEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00414525;
- 90% Identity
- iTF_00343361; iTF_01497675;
- 80% Identity
- -