Eman029501.1
Basic Information
- Insect
- Ephialtes manifestator
- Gene Symbol
- rdx
- Assembly
- GCA_963970395.1
- Location
- OZ019976.1:4492680-4495420[+]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 2.1e-29 1e-26 94.6 1.1 3 107 197 299 195 302 0.93 2 6 0.5 2.6e+02 3.3 0.1 78 109 302 333 299 334 0.87 3 6 0.00043 0.22 13.1 0.2 78 107 353 382 335 385 0.79 4 6 0.48 2.4e+02 3.3 0.1 78 109 385 416 381 417 0.87 5 6 0.00028 0.14 13.7 0.2 78 107 436 465 418 468 0.79 6 6 0.48 2.4e+02 3.3 0.1 78 109 468 499 464 500 0.87
Sequence Information
- Coding Sequence
- ATGAACCTCGTGCCGCCTAACTTAGATCTTAGACTAGATTACAACGCATACCAACAACACATACCCATGAGGGTTGCCGAAAGACTTGTATACACGACGCAATCGCAATTTAGCTACGTGTTTACCTTAGACGAAGATGATTTACGCGTGATGAACACATTTAATGAAGTCCTGAGCTCGCCACCATTTTTTACTGACGCGCAGGACATGTGGTGTCTGAAATTGCGTGATTACAACGAAGGCCTGATCTCGCTTGACTTGCGCCTTCTCTCTTCGAAAAAATCCGTAATCAAAGCAACATACGAATTCTCGATTATTGGGGCCGGCATGACTAAAATCTTCAGTAGACCGCGTTcggatatttgtatttttataccgGACACAGATAAAGCTGAACATGGACTTATTGATTTCATCTCTTCTGATATGCTACGTAATGAACAAATGTGGTCAGGATCAGAAGAAGGGACATTCGATATCCTTTGTGAAGTCGCAGTCGTGTTGGACATTGATACTGTTGATGTACCGAAAAGCTGCAACGAAATTCCGTTCAACGTTCCGAAATGTCAGATCGTCGAAAATCTCGAAGGTTTATTCGTAACAGGAGCATTCAGCGATGTTACTATCAACATTTGTGATCGTGAAGTGCGCGCCCATAGAACCATCTTGGCGACGAGCAGTCGCGTTTTCTGCGCGATGTTTAAACACGAAATGTCGGAGAAAATAGAAAGTCAGGTTACCATAATCGATGTGGATTACGAGGTTTTTCATGAGATGTTACGATTCATCTACACGGGCAAAGTggagaatattgaaaaaattacagacaaGCTTTTAGCAGCGGCAGATAAATATCAACTGGACAGATTGAAGGTTATGTGCGAGGAAGTGCTACGTTTAAATCTGGCGGTCGAAAACGCTGCGGAAATGTTGATACTCGCCGATCTCTACAACGCTCAGCAGCTGAAGTCGAGGGTTGCGCAATATATTAACGAGAATCTCACAGATGTTTTGAAAACCGATAGTTTTCAGTCGATGATTGAATCACGTCCGATCTTGATGACTGAAATTCTACacaaGCTTTTAGCAGCGGCAGATAAATATCAACTGAACAGATTGAAGGTTATGTGCGAGGAAGTGCTACGTTTAAATCTGGCGGTCGAAAACGCTGCGGAAATGTTGATACTCGCCGATCTCTACAACGCTCAGCAGCTGAAGTCGAGGGTTGCGCAATATATTAACGAGAATCTCACAGATGTCTTGAAAACCGATAGTTTTCAGTCGATGATTGAATCACGTCCGATCTTGATGACTGAAATTCTACacaaGCTTTTAGCAGCGGCAGATAAATATCAACTGGACAGATTGAAGGTTATGTGCGAGGAAGTGCTACGTTTAAATCTGGCGGTCGAAAACGCTGCGGAAATGTTGATACTCGCCGATCTCTACAACGCTCAGCAGCTGAAGTCGAGGGTTGCGCAATATATTAACGAGAATCTCACAGATGTTTTGAAAACCGATAGTTTTCAGTCGATGATTGAATCACGTCCGATCTTGATGACTGAAATTCTACGTGCGTCGGCGATGAAGACACAATTTCGAGCCGGCAAATCTGTACAGTAG
- Protein Sequence
- MNLVPPNLDLRLDYNAYQQHIPMRVAERLVYTTQSQFSYVFTLDEDDLRVMNTFNEVLSSPPFFTDAQDMWCLKLRDYNEGLISLDLRLLSSKKSVIKATYEFSIIGAGMTKIFSRPRSDICIFIPDTDKAEHGLIDFISSDMLRNEQMWSGSEEGTFDILCEVAVVLDIDTVDVPKSCNEIPFNVPKCQIVENLEGLFVTGAFSDVTINICDREVRAHRTILATSSRVFCAMFKHEMSEKIESQVTIIDVDYEVFHEMLRFIYTGKVENIEKITDKLLAAADKYQLDRLKVMCEEVLRLNLAVENAAEMLILADLYNAQQLKSRVAQYINENLTDVLKTDSFQSMIESRPILMTEILHKLLAAADKYQLNRLKVMCEEVLRLNLAVENAAEMLILADLYNAQQLKSRVAQYINENLTDVLKTDSFQSMIESRPILMTEILHKLLAAADKYQLDRLKVMCEEVLRLNLAVENAAEMLILADLYNAQQLKSRVAQYINENLTDVLKTDSFQSMIESRPILMTEILRASAMKTQFRAGKSVQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -