Basic Information

Insect: Ephestia elutella
Gene Symbol: -
Assembly: GCA_018467065.1
Location: CM031573.1:14185681-14194686[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.0032 0.39 12.8 1.2 2 23 204 226 203 226 0.95

2 23 0.047 5.8 9.1 0.6 1 22 610 631 610 631 0.95

3 23 6.9 8.5e+02 2.3 0.3 1 22 673 694 673 696 0.82

4 23 0.0034 0.42 12.7 0.7 3 21 707 725 705 726 0.94

5 23 0.91 1.1e+02 5.1 0.1 2 23 734 756 733 756 0.89

6 23 0.042 5.2 9.3 0.1 3 23 777 798 775 798 0.96

7 23 0.00012 0.015 17.3 2.2 1 23 804 827 804 827 0.96

8 23 0.13 16 7.7 0.0 1 23 849 872 849 872 0.90

9 23 0.0056 0.69 12.0 3.5 1 23 877 899 877 899 0.97

10 23 0.00077 0.094 14.7 0.2 1 23 905 928 905 928 0.96

11 23 0.0011 0.13 14.3 1.3 1 23 943 965 943 965 0.98

12 23 0.00018 0.022 16.7 1.8 1 23 1013 1036 1013 1036 0.97

13 23 0.0012 0.14 14.1 1.6 1 23 1097 1120 1097 1120 0.96

14 23 0.0011 0.14 14.2 2.1 2 23 1148 1170 1147 1170 0.95

15 23 0.089 11 8.2 0.1 2 23 1176 1198 1175 1198 0.93

16 23 0.01 1.2 11.2 0.2 1 21 1243 1263 1243 1264 0.95

17 23 0.0013 0.16 14.0 0.6 1 23 1274 1296 1274 1296 0.93

18 23 0.00025 0.031 16.3 0.4 2 23 1388 1410 1388 1410 0.93

19 23 1.8e-07 2.2e-05 26.1 1.1 3 23 1417 1437 1416 1437 0.98

20 23 0.7 86 5.4 0.5 3 23 1456 1476 1455 1477 0.94

21 23 0.19 23 7.2 0.0 1 23 1499 1521 1499 1521 0.97

22 23 0.028 3.5 9.8 0.6 1 23 1527 1550 1527 1550 0.95

23 23 0.00015 0.018 17.0 0.5 1 23 1558 1581 1558 1581 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.0032	0.39	12.8	1.2	2	23	204	226	203	226	0.95
2	23	0.047	5.8	9.1	0.6	1	22	610	631	610	631	0.95
3	23	6.9	8.5e+02	2.3	0.3	1	22	673	694	673	696	0.82
4	23	0.0034	0.42	12.7	0.7	3	21	707	725	705	726	0.94
5	23	0.91	1.1e+02	5.1	0.1	2	23	734	756	733	756	0.89
6	23	0.042	5.2	9.3	0.1	3	23	777	798	775	798	0.96
7	23	0.00012	0.015	17.3	2.2	1	23	804	827	804	827	0.96
8	23	0.13	16	7.7	0.0	1	23	849	872	849	872	0.90
9	23	0.0056	0.69	12.0	3.5	1	23	877	899	877	899	0.97
10	23	0.00077	0.094	14.7	0.2	1	23	905	928	905	928	0.96
11	23	0.0011	0.13	14.3	1.3	1	23	943	965	943	965	0.98
12	23	0.00018	0.022	16.7	1.8	1	23	1013	1036	1013	1036	0.97
13	23	0.0012	0.14	14.1	1.6	1	23	1097	1120	1097	1120	0.96
14	23	0.0011	0.14	14.2	2.1	2	23	1148	1170	1147	1170	0.95
15	23	0.089	11	8.2	0.1	2	23	1176	1198	1175	1198	0.93
16	23	0.01	1.2	11.2	0.2	1	21	1243	1263	1243	1264	0.95
17	23	0.0013	0.16	14.0	0.6	1	23	1274	1296	1274	1296	0.93
18	23	0.00025	0.031	16.3	0.4	2	23	1388	1410	1388	1410	0.93
19	23	1.8e-07	2.2e-05	26.1	1.1	3	23	1417	1437	1416	1437	0.98
20	23	0.7	86	5.4	0.5	3	23	1456	1476	1455	1477	0.94
21	23	0.19	23	7.2	0.0	1	23	1499	1521	1499	1521	0.97
22	23	0.028	3.5	9.8	0.6	1	23	1527	1550	1527	1550	0.95
23	23	0.00015	0.018	17.0	0.5	1	23	1558	1581	1558	1581	0.97

Sequence Information

Coding Sequence: atGAGTGTGAATTATGATCGTGTTTGTAGACTGTGCTTGTCATCCCGAGGCGAATTACTGCCGATTTTTCCTACCACCAGTTCGGATGACTCGGAACCTCCCGTCCTCGCGAGGAAAATTAAGGATTGCGTCTCTGTACAGATAAACGAAAATGATGACCTGCCAACTAATGTCTGCAGGAAATGCATGAACAATGTGAATAACTGGCACATATTTAAGTCAGTATGTGAAAGGACACAAAACAAACTAGAATCTCTGATAAAAAAAGATGGCAACCAACTAGAAGAGGTGAAAATCAAAAGTGAACCACTTTCTGATGAGGCTTATGAAGATGGAGTGGTTATTGATGGGTCATACCCTGAGGGTGAGAATGCCGGAGGTTCTAGTAAAATGCAACCAGAAGGCCCACCAATCTTGGCTTCATTGGGGCTCACACCAAGGAGTGATAAGGGAATGGAGAGCGACaaggaggaagaagaagaagacgagGAGATGAACGAATCTGGTCAGTCGTTCTCCGGCGCGGCGGCCTTGCCCGAGGTGTCCATCACGGTGATGCGGCGCTCGGGCCTGCCCCAGGCACGAGGCGTGGCTGCGTTGGCCTCCAAGGAGTGCCTTGTGTGCGGCCGCTCCTACCGCTACTCACACAACGCACGCCGCCACGAACTCACCGCACACAGCTTCGACCGCTACACCAACAAGGTCTCACACAAGAAAACGTTCTCACACATGCAACCCAAACTCAGACCCAACCCGTTCAACCCCAAAGCTCGGCTGATGCCGAGCCACAAGATGCATCTCATCCCCAAGCCGCTCCCGAAGTTGATGCCGCACAAAAACCTAAAACCCCCGCAACCGGTTCTCATCAAAAAGGGACCGCAAAACAATTTGCCATATCCCCTCCGTATTAAGGCCCTGAAGGATTTGCAAATCAAGAAGAAAGAACCACAGATGTTAAAGACTTTGCTCACGTCGAAACCTGAAATTTTGACATCTGAGATTGATATCGCAAATTCGGAACCGGAGAGTCCCGAGACTTTGGTGTCTGAGCCCGAAATTGCTTCATTCCAAGTAGAGGCTATTTTATCGGAGCCTGACGCTTTGGACCAGCCGCAAGGTGAGGAAGATGGAGAAGAGGAGGGTGAAAGAAATGATCAGAGCCAGAATTATGACACTGTTGATATGGATTCAgaaaatgaaattgaaattgCTCGACAACAAGAGAATGAAGTGGACGATGATGATCACAATGTCGATAATGACAACGAAGATAACTTACCCCATGATGATGAGCACAATGCAGAAGCGGCCCACAGTGAGACAGAAAAAGAGCAAAACGAAGAGAATGGAGAACAGGAGGAATTTGCAGAAAAGGAAGAAAATCTAGAAGATAATAAAGTTGAAGGAGAGGGAGATATTAAAGAATTGGAGGAAGAGGATGATAGAGAACCTGAGGAACAAGAGGTAAATCATGAagaaaatgaagaagaagatgatgataTGCCTCCAATGGGCTTGGCACCTGTTGTTGAGATAAATGAAGACATGCAAACCAATTCATACAATAGCGAGATGAATGAGGAAGAAGAGGAACTTGATGATACTGCGGACGATACTGCAGATCTCAATGAAACTGAAGAAGAACCAGTCAAAGAGTTAGATCCTGATAAAGTATATGTGACTAAAACTCAAAGAGAGTTTATTGTCAAATTCAGAGATATAATTCAACAGATCAATACAAAAGTATGTCTTTGCTGTGACCGAGAACATCCGCGTCGAAAGGCAGTCATACAACATTTGCAGAAAAATGGACACAAGGTCCCAAAACATACATGTTATAATTGTGTGGTAACATTTACTCACATTGGAGCTCTACTAAGTCACATGAGGTCAAATACTTGCACAGACTTATGGAAGATTATTTACAATGAAAATGGCATCACAGACGACATGGTCATAGATGATGAACCCAAGGAAATTAAAGTTCAATCTAAAGATGTTTTCAATGCAAGGTCGTATGCTTGCAAATTATGCCCTGCTAAGTTCCAACTCAAACAGTTTATTATGAAACACGTGTTGGACGTCCATGAAGATGGACAATCTAGAGTTCCGATGATTTGTGTCCATTGTGGGTCACGGTTTAAGGACAAGAGTTTAATTAAGAAACATATACGTAACGGAGACTGCACAGTTTACGTATCTTGCGACTTATGCTCAGAAAAGTTTCCGAACATGCAGACTTTCAATGACCATGCGTTGGCCGTACACGCAGGTAGTTTTGACCATACCGATAACCAGAGCAAGTGCGTCGATGGCCGCCCTACCGATTGTCCGATTTGTGGGAAGAAGAACAGCGGATACCCTAATctggtaaaacatttgaaaataatacataatgaaGAAAAGCCGCATTATTGCAAACACTGCGACGAAAAATTCGAACAAGCGGCTGATCTCAATCAGCACATTTACACAGTTCATCAAGACAGGGGTATGACTGAGCCTGACATGTCACTTGTGAAGGAAGAGGCTGAAGAATATCATTATTCCTGCACTGAATGTAATGCTATTTTCGAGACTGTGGACGCGTGGACTGACCACCAGGTGGCCGAGCACAACCAAGTGGCCCACCATTGTGATCAGTGTGACAAGAAGTTCCTGCGACCTTCAGAACTTGCTGAGCATAAAAATACTCACTTGCGTGTCAAATTCTATCCTTGCAATATATGCAGCAACTCATACAGTACTCCTCAAAAGCTGACAGACCATATTCAACAAGCCCACCCGGGAGCGGGCACTGGAGGATCACAAACTATGGAGAATGAATTCTACTGCGATATTTGTATAAGATCCTTCAAGAGTCGCCAAGCGTACTCTAACCACATGCGTATTCACTCAAGAATACCCACCACTAACAGGAAACCTGGAGATCCTAAGGGCTTCTCGCCCCAAATTATAGGGAAACCAATCAAACAGTTCCCAGCTATTCAAGCAAACTTTGTTTACAAGCCAAATTGTAATGTTCCTAACGCTCCTTACTCATGTGATATTTGTGGCAAAGGCTTTATGCACAAGAAGAATATATGGAAACATAAGAAGGTGTTACATGCGGATATACTCAATGATAGGAATGACAGTGAAGAAAATACAATGCAAGCTTCTACTGAGGAAGACGATTACAATGTAGACGAAAACGGTGCTCTTTTGTCGACTCCACAgtttaatagttttaattttgcCAACTTCGCTAACAATGTTCAGCAGACGCCACAGGAAGATCCAATGCCTTATTCGTGCGAACTTTGTTTCAAGCGATTCCCGCTTAGGTCAAGTTTGTGGAAACACAAACGAGCTAAGCACGGGATTATCAACGCCAGTGCCGGGAACGAGGCCCCGACCCCGCCCGCGGCCGCCCAATCCGAAGGAAGTAGCAGTCGGTCCAGCTGCACTATTTGTAAAATAACCTTCTCCGACAAGAAGTCGTACTATCGTCATAGAAAGAATGTGCACAAGACGGCAACACAAATGTGCAAAATATGTGGCAAGCCATTGAATTCGACACTGGAACTTTATGAGCATTTAAAAGCTGCTCACGCTCGTGAACTTTTAGGATACAACGCCAGCCAGGGCTCTAGTAGTAAGTCCCACGAAATGAAACAAGAATTGGAAGTTGAGTACGAGAACGATCAAGATTCGCTCGATCCCTCAGTGGACTACCAGGCGCGCTACCCTTGTGATACATGCGGAAAGCAATTCGTCGGATTGTTGGCGTTGCAGAACCATCAGTGTATAAATCAAGTTCAGTCACAGCCGCAAACTTTCGACTGCGAGATTTGTCACAAGAGTTACACCTCAATCGCAGCGTTAAAGAGCCACCGCGGTTGGCACTTGCGTTCTCCAGACGGGAAAGCGGCCGCGAACAACAGCGGGCTTTGGATGCCGCAGAATAAGGTGACCAATAAGGTCAGCAAGCACGAGGTTGTGGATCCGGTGCAGCTGGCGCGGGTGCAGCATATCGCACCGTCCTCGCCGGCGGCTGCCGTGGCTGCAAAGCGTCGGTTACCGCCCGAGGTCGAGGTCACCGTCGTCAACCCCAACAAAAAGCTGCGATCCGACGACTCTATCGATTTAGAGCAGCAGGCCGGCTCGATGGAAGACAGATACTGTACGCTGTGCGACAAAGAGTTCACCAAGCGAGCGGCGTACCAGCGCCACATGGAGGAGGTTCACATGCCGAACTCCGTGTTTTGTCCGGTTTGCGACAAGAGCTTCACTAGGAAGTCGACCTTGATCGTGCACATGAAGAAGCACTACGAGGGCGGGCAAGGGAGTTCGAGCGGGACGCAGTTGGAGGATGAAGTCGCGTGCGATGTTTGCGGCGCTCAGTTGGAGAGTGAGCACGCGTTGCGGGCACACAAAGTGCGGCACCACGGGGAGGAAGAGTCTGAGGAATCTGACGATGAGGGGAGTGTCCCGTGCGCACAACCTGGTGAATTCACTTGCGCACAATGCGGTGACGGTGTGGCAACGCCGCGCGATCTCATCGCGCACCGCACTATGCACGCCACGCCTACCAAATTCTTCTGCAACATCTGCAAAGTGTACTTTGCGAGGGCTTTGGACCTTTCCTCGCACACGCGTGCACGACACGCCGACAACGAAAAAGTGTTCTTCCCCTGTGCTATGTGTGACCGCTTCTACATGAACAAGAAAAGCTTGCAGAGGCACATCGAGACCGCTCATTGA
Protein Sequence: MSVNYDRVCRLCLSSRGELLPIFPTTSSDDSEPPVLARKIKDCVSVQINENDDLPTNVCRKCMNNVNNWHIFKSVCERTQNKLESLIKKDGNQLEEVKIKSEPLSDEAYEDGVVIDGSYPEGENAGGSSKMQPEGPPILASLGLTPRSDKGMESDKEEEEEDEEMNESGQSFSGAAALPEVSITVMRRSGLPQARGVAALASKECLVCGRSYRYSHNARRHELTAHSFDRYTNKVSHKKTFSHMQPKLRPNPFNPKARLMPSHKMHLIPKPLPKLMPHKNLKPPQPVLIKKGPQNNLPYPLRIKALKDLQIKKKEPQMLKTLLTSKPEILTSEIDIANSEPESPETLVSEPEIASFQVEAILSEPDALDQPQGEEDGEEEGERNDQSQNYDTVDMDSENEIEIARQQENEVDDDDHNVDNDNEDNLPHDDEHNAEAAHSETEKEQNEENGEQEEFAEKEENLEDNKVEGEGDIKELEEEDDREPEEQEVNHEENEEEDDDMPPMGLAPVVEINEDMQTNSYNSEMNEEEEELDDTADDTADLNETEEEPVKELDPDKVYVTKTQREFIVKFRDIIQQINTKVCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFTHIGALLSHMRSNTCTDLWKIIYNENGITDDMVIDDEPKEIKVQSKDVFNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSRVPMICVHCGSRFKDKSLIKKHIRNGDCTVYVSCDLCSEKFPNMQTFNDHALAVHAGSFDHTDNQSKCVDGRPTDCPICGKKNSGYPNLVKHLKIIHNEEKPHYCKHCDEKFEQAADLNQHIYTVHQDRGMTEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCDKKFLRPSELAEHKNTHLRVKFYPCNICSNSYSTPQKLTDHIQQAHPGAGTGGSQTMENEFYCDICIRSFKSRQAYSNHMRIHSRIPTTNRKPGDPKGFSPQIIGKPIKQFPAIQANFVYKPNCNVPNAPYSCDICGKGFMHKKNIWKHKKVLHADILNDRNDSEENTMQASTEEDDYNVDENGALLSTPQFNSFNFANFANNVQQTPQEDPMPYSCELCFKRFPLRSSLWKHKRAKHGIINASAGNEAPTPPAAAQSEGSSSRSSCTICKITFSDKKSYYRHRKNVHKTATQMCKICGKPLNSTLELYEHLKAAHARELLGYNASQGSSSKSHEMKQELEVEYENDQDSLDPSVDYQARYPCDTCGKQFVGLLALQNHQCINQVQSQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQNKVTNKVSKHEVVDPVQLARVQHIAPSSPAAAVAAKRRLPPEVEVTVVNPNKKLRSDDSIDLEQQAGSMEDRYCTLCDKEFTKRAAYQRHMEEVHMPNSVFCPVCDKSFTRKSTLIVHMKKHYEGGQGSSSGTQLEDEVACDVCGAQLESEHALRAHKVRHHGEEESEESDDEGSVPCAQPGEFTCAQCGDGVATPRDLIAHRTMHATPTKFFCNICKVYFARALDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIETAH*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00833313;
90% Identity: iTF_00651969; iTF_00651970; iTF_00651967; iTF_00651968;
80% Identity: -