Eelu023157.1
Basic Information
- Insect
- Ephestia elutella
- Gene Symbol
- Hr39
- Assembly
- GCA_018467065.1
- Location
- CM031578.1:18403377-18416724[+]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.19 3.5e+03 -1.4 0.2 114 198 79 169 7 181 0.45 2 4 3 5.4e+04 -5.7 8.7 98 173 243 318 135 362 0.54 3 4 9.5e-08 0.0017 19.4 0.1 1 20 443 462 443 468 0.91 4 4 1.1e-65 1.9e-61 210.3 0.0 155 408 499 761 470 761 0.85
Sequence Information
- Coding Sequence
- ATGTCGAGTGAGGCCGACGCGGTGAAGGTGGAAGGAGTCCACGTTTCAGTAACCACGATCAGTATGACGGGACCAGAGACAAGTAATGttcAATTCTCGTACAGTTCAAGCGGAGTCCGCATCAGCGTGTCTTCAGACCCTCATGATGAAGATTCAACTGATGCCGAAATCTCTAAAATTGACTTCAACCAACATCAACACGAGGTGAACATGCGCAACAAAAAGAAACGATCGTCGAGTGGCACCCAATGCGACAGCCAGGGCAACGACAGGGAGCGGCCGATGTCTTGGGAGGGCGAGCTGTCAGACTCTGAGATGGTCATCGATACTAGTGTCAACAACGATGAGAACAGCAGTTCCCTAGACCTCCAATCGTCACGAGACTCCATCGACACGCTTCGGAATGTGACCATCAAGACAGAGCCTCTGAAGACCGAGGCCTTCCAATGTGTAGATGATCAGAGGGTGCTCGATTTGAAGTACACCGCACCGCTGCAGTCGCATCAGAGGAGCCATAGTATGAACAGGATATCAGTCCTGACAGACAACTCGCCTCTCTCGCTCGCGCGGCGGCCGGCCTCCCCCACCAACAGCGCCAAATCCCTGGGGCTCGGAGATCAGAACGCTATGCCGATGATGCCGCAGACCTCTCTGGGGGAAGTCCAGAACCTGACTATAAAGAAGGAGACGCAGTTGTCAGAACTGAAATGTGAGCCATCAGTGGGAGTGGACAAGTTGCTGGGCGCGCTGCACGGCTCCCCGCTGCTGGGCCGGCTGCCGCGCGTGCAGTCCAGCGCCAGCACCGACTCCGCGGTACATTCCATGTATACACACAGTGTCTACAGCAGTCCGTCAGCTAGTCCCCGCGCCTCCCGCCACTATACGCCGTCTCTTTCTCGCAACAACAGTGATGCATCGCATTCCTCGTGCTATTCTTATAGCTCGGAGTTCTCGCCTACGCATTCTCCTGTACAGGGTAGACACCCACATGTGGTATACCGCGAAGCAGCAGCGCCGATGTTTCCCGCGTCGCCGGCGCACGACGAGGACGCCGATACCACGGACGAGAGGCTGCACCACCACCAGGGCATTAGTAGGCAGCAGCTTATCAATAGCCCATGCCCCATTTGTGGGGACAAGATCAGCGGCTTCCATTACGGCATATTCTCCTGCGAATCGTGCAAAGGTTTCTTCAAGAGAACCGTACAGAACCGAAAGAACTACATGTGTCTGCGGGGCGGAAACTGTCCTGTCACGGTCGCCACGAGGAAGAAGTGTCCGGCGTGCAGATTTGACAAGTGCCTCGGATGTGGGATGAAGCTTGAAGCGATTCGCGAGGACCGCACGCGGGGCGGCCGCTCCACGTACCAATGCTCGTACTCGCTGTCCGGCGCGGCGTCCACCGGCTCGCTGCTGTCCGCGCACGTGCCCACCACGCTGCGGCACGCCTCCTCGCTCACTTGTgtaaaTGGTCCAGGTTCTTATAACAGCAGAGGGGAGTCAAGTAACAGCCGCCTAACGCCGGACATCCCGCCATTATTACAGGAAATAATGGAAGTGGAGCACCTCTGGCAGTACAACGAATCAGAGTTGAACCGACTCGGCAAATCCACCGGCAGTCCGTCCGCCAACCCCCTGCTAGCTGCCAGCGGAATAACCGCACAGAACTCCAGTCCGGACTTCCTAGCGGATCTGTGCAATATCGCCGACCACAGATTATACAAGATCGTCAAGTGGTGCAAGAGCTTGCCGCTTTTTAAGAACATTTCGATCGACGACCAGATCTGCCTGCTGATAAACAGCTGGTGCGAGCTGCTGGTGCTGTCGTGCTGCTACCGCGGCGTCAGCACGCCGGGCGAGGTGCGCGTCGGCGGCGGCCGCGGCATCACGCTCACTCAGAGCGCCAAGTTAGGATTAACGCCTTGCATAGAGAGAATGCTGAGCTTCACCGACCACTTGAGAAGACTACGGGTTGATCGATACGAGTACGTCGCTCTGAAGGTCATCGTACTGCTCACTTCAGATGCGCCAGAGTTGCGCGAAGCGGAGAAAGTGCGAGCTTCCCAAGAGAAGGCGCTGGCGGCGCTGCAGGCCTACACCGCCGCGCACTCGCCCGACACGCCCGCCAAGTTCGGAGAGCTGCTGCTGCGCATACCTGAGCTGCAGAGGACTTGCCAAtttttcatGCAAGTCGGCAAGGAAATGCTCAACCCAGCCAACAAAGGTAAAGATGGCGACGGTCCGAGCTTCAATCTCCTCATGGAACTGCTCAGAGGAGACCACTGA
- Protein Sequence
- MSSEADAVKVEGVHVSVTTISMTGPETSNVQFSYSSSGVRISVSSDPHDEDSTDAEISKIDFNQHQHEVNMRNKKKRSSSGTQCDSQGNDRERPMSWEGELSDSEMVIDTSVNNDENSSSLDLQSSRDSIDTLRNVTIKTEPLKTEAFQCVDDQRVLDLKYTAPLQSHQRSHSMNRISVLTDNSPLSLARRPASPTNSAKSLGLGDQNAMPMMPQTSLGEVQNLTIKKETQLSELKCEPSVGVDKLLGALHGSPLLGRLPRVQSSASTDSAVHSMYTHSVYSSPSASPRASRHYTPSLSRNNSDASHSSCYSYSSEFSPTHSPVQGRHPHVVYREAAAPMFPASPAHDEDADTTDERLHHHQGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYMCLRGGNCPVTVATRKKCPACRFDKCLGCGMKLEAIREDRTRGGRSTYQCSYSLSGAASTGSLLSAHVPTTLRHASSLTCVNGPGSYNSRGESSNSRLTPDIPPLLQEIMEVEHLWQYNESELNRLGKSTGSPSANPLLAASGITAQNSSPDFLADLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLVLSCCYRGVSTPGEVRVGGGRGITLTQSAKLGLTPCIERMLSFTDHLRRLRVDRYEYVALKVIVLLTSDAPELREAEKVRASQEKALAALQAYTAAHSPDTPAKFGELLLRIPELQRTCQFFMQVGKEMLNPANKGKDGDGPSFNLLMELLRGDH*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00033911;
- 90% Identity
- iTF_00806824;
- 80% Identity
- iTF_00651852;