Edan015787.1
Basic Information
- Insect
- Ephemera danica
- Gene Symbol
- Tfip11
- Assembly
- GCA_000507165.2
- Location
- AYNC02016627.1:216-6503[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.2e-89 2.9e-85 286.2 19.7 2 275 402 672 401 672 0.96 2 2 0.14 1.3e+03 -1.3 0.0 157 189 684 715 677 723 0.76
Sequence Information
- Coding Sequence
- GAAGTTACGGACTAcgatttgaaaaatgaatttaaccTCAATAGGCCTCGGATGCGTCTTTCTAAGAATCAACAAATTTATGGCATTTGGGCAGATGATAGTGACGATGAGGCTCAAGAAAGTAGCAGTCGACGGGCACAGTTCCAAGGAGCCAGTAAAAAGAAACAAAGCTACTCCACGCCAGTGAGTTTTGTTGCTGGTGGAGTACAACAGGctggcaaaaagaaaaatgaggAGAAGAAAGATTCTGATGATACTCAAATGGAAGAAGATGGAGGTGCAGATGGAACACCAATGGGTTCTTCAAGTGAGGATGAAATGCCCCGAGCAGGATTCGGACAAAAGAAATCACAAAATTCTGGCTTTGGCAAACGAAGACCACTTGCTCAAGCCCATGAAATGGGAGAGATTGACTCTGACATTGCTGGCATGCGACGTCGAATGCCAGGAACAAGCAGCCTGTCTATGATGCAAAAAGGTGTTGGAAATTGGGAGAGACACACCAAAGGCATTGGTGCAAAGTTACTTTTGCAGATGGGTTTTCAACCAGGGAAAGGTCTTGGTCGAAACTTGCAGGGTATCTCTAATCCAGTAGAAGCTACTGTTAGAAAAGGAAGGGGAGCTATTGgtgCCTATGGTCCTGAGAGGAGGCAGAAACTTGCAGATCAGGTAGACTCTGAAGATGAAGAAGCCAAGGAGTTCTCAGAAAAGTTGTCACAGTGGCGAAAGGGGGAAGCTTCTACCAGTCagaagaaaactaaaatacgaTATGCATATAAAACTGTAGATCAAGTTTTGGAAGAGGGGAAGAGTAAACCTGCACCAAGTATTAAAGATTACAGTAAAATGAGCAAGGTGAAGGTAATCGACATGACTGGTCCAGAACAGAGAGTTCTCAGTGGCTATCATGCTATTGCTGGTCAGCAAAGGCCTTCGGAAGAATGGGACTCAAGCAAAACCCGAGACTTCACTTATTTTGACCTGCCTGAGTTATTACATAACCTGGATTTGTTGGTGACCATGTGTGAGCAGGATATTGTAGACAGTGGGAGGCGAATGAGGAATGGTCAAGATCGCACTGTGGTGCTACAGCAAGAAGTTGAGACTTTGGGAAACCTCGTGGAAACTCAAGCTGCACAGGCTGATTCCCTTGAATCTTGTTTGAAGCTTGTTGATGCCCTGAATGAGAAACCACTCTCCCTTGAAAAGGCTGCTCAGTGTATCAAGGAGTTGCAGGAAAAACATAGTATGGAGTACCAGCTGTATGAAATGGGTGCAATGGCTGTGAACCTTGTGACCCCAGCAGTGAAGGAGATGCTGAAAGATTGGCGTCCGCTTGAAGCCCCTGCTTCTCCAAATGTTGTGGCTGAACTCAAGAAGTGGCAGCAGTTACTGGAAGGAGACCGTTCTCATACTCTCAGTTCTGCTGCAGCCAGAGATCCATATCATTCACTTGTGTGGGAAGCTTGGATGCCTAGCATCAGGACTGCTGTCAGtgGGTGGAATTGCAGACAGAGCACTCCAATGATAGCCCTGCTGGAGTCCTGGCGAGGTGTTGTGCCCAGCTGGATTCTGGTCTCCCTGGTGGAGCAGTTTGTGTTGCCCAGGTTGAGCCAGGAGGTGGAAGCATGGGACCCTCTCACAGACATCGTCCCAGTGCATGAGTGGCTGCACCCCTGGATCCCCTATGCTAAAGACACACTTGCAATCTCAGTGTACCCCATCATCAGACACAAACTGTCCTCGGCTCTCACAGCGTGGCACCCGTCAGACCGCTCAGCTCATCTCATGCTGAAGCCATGGCAAACTGCTTTCCCTCGGGGTGACATGGATGCTTTCTTGGTGACCAACATATTGCCCAAACTGCAGACCATGATGCAGGAACTGGTCATCAACCCTCATCAACAGCACCTAGATCAATGGAACTGGGTAATGGAGTGGGAAGACATGCTACCTGTTTATACAATGGCAACACTGCTGGAGAAATTCTTCTTTCCCAAATGGCTTCAGGTACTCACTATGTGGCTTACTCATGCTCCCAATTATGATGAAATCAGTAATTGGTATCGTGGATGGAAAGGAATGTTGTCTGAACAATTGTTGGTGCAGCCTGGTATCAAAGCGAAATTGCATGAAGCACTTCAGCTGATGAACAGAGCTGCTGTGGCAGCCAATCAGAATAAGAGCCTGAACTTCTTGACAGCAGCTCCTCCACCTCCCCCACCACCACAAAGGAGAGATTCACCTAATGAGTTGATGGCAGAAGCAGTTCGCACAGCAAGCCAAATTCCTCAAGGCTTCCGAGAGTTACTGCAGAAAAGATGTGAGGAGCGTGGCATTGTATTTGTGCCCATGCCCAACAGGTGGCATGAAGCCAAGCAAGTATATCGGTGTGGCAGAGTGCAAGTATACTTGGACCGCAATGTTATATTTGTTTGTCGACAAAACACTAACATCTGGACTCCATCCAACCTACAAGCCGTATTAGACATGGCTgcttaa
- Protein Sequence
- EVTDYDLKNEFNLNRPRMRLSKNQQIYGIWADDSDDEAQESSSRRAQFQGASKKKQSYSTPVSFVAGGVQQAGKKKNEEKKDSDDTQMEEDGGADGTPMGSSSEDEMPRAGFGQKKSQNSGFGKRRPLAQAHEMGEIDSDIAGMRRRMPGTSSLSMMQKGVGNWERHTKGIGAKLLLQMGFQPGKGLGRNLQGISNPVEATVRKGRGAIGAYGPERRQKLADQVDSEDEEAKEFSEKLSQWRKGEASTSQKKTKIRYAYKTVDQVLEEGKSKPAPSIKDYSKMSKVKVIDMTGPEQRVLSGYHAIAGQQRPSEEWDSSKTRDFTYFDLPELLHNLDLLVTMCEQDIVDSGRRMRNGQDRTVVLQQEVETLGNLVETQAAQADSLESCLKLVDALNEKPLSLEKAAQCIKELQEKHSMEYQLYEMGAMAVNLVTPAVKEMLKDWRPLEAPASPNVVAELKKWQQLLEGDRSHTLSSAAARDPYHSLVWEAWMPSIRTAVSGWNCRQSTPMIALLESWRGVVPSWILVSLVEQFVLPRLSQEVEAWDPLTDIVPVHEWLHPWIPYAKDTLAISVYPIIRHKLSSALTAWHPSDRSAHLMLKPWQTAFPRGDMDAFLVTNILPKLQTMMQELVINPHQQHLDQWNWVMEWEDMLPVYTMATLLEKFFFPKWLQVLTMWLTHAPNYDEISNWYRGWKGMLSEQLLVQPGIKAKLHEALQLMNRAAVAANQNKSLNFLTAAPPPPPPPQRRDSPNELMAEAVRTASQIPQGFRELLQKRCEERGIVFVPMPNRWHEAKQVYRCGRVQVYLDRNVIFVCRQNTNIWTPSNLQAVLDMAA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -