Edan002768.1
Basic Information
- Insect
- Ephemera danica
- Gene Symbol
- GCC1
- Assembly
- GCA_000507165.2
- Location
- KZ497595.1:1249221-1257952[-]
Transcription Factor Domain
- TF Family
- TSC22
- Domain
- TSC22 domain
- PFAM
- PF01166
- TF Group
- Basic Domians group
- Description
- These proteins are highly similar in a region of about 50 residues that include a conserved leucine-zipper domain most probably involved in homo- or hetero-dimerisation. Drosophila protein bunched [1] (gene bun) (also known as shortsighted), a probable transcription factor required for peripheral nervous system morphogenesis, eye development and oogenesis.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 7 4.4e-09 4e-05 23.7 2.2 13 55 98 140 96 142 0.92 2 7 0.14 1.3e+03 -0.4 0.1 15 30 139 154 137 159 0.84 3 7 0.0045 41 4.4 0.1 18 31 188 201 184 217 0.81 4 7 0.51 4.6e+03 -2.1 0.1 31 43 260 272 244 277 0.54 5 7 0.015 1.4e+02 2.7 1.7 18 43 278 303 268 312 0.80 6 7 0.2 1.8e+03 -0.8 3.5 15 35 318 342 297 350 0.68 7 7 0.069 6.2e+02 0.7 1.5 19 55 418 453 409 455 0.78
Sequence Information
- Coding Sequence
- ATGTCTGACCAAATGTCTGAGCAGAAAAACTTGATTGACAAGCAAAAGGAACAGCTAGTGCGTTATGAGAAAAGGTTGAGAGatGTTGTGACAGCTTATAAGGGACTTTGCAAGGAGAAGGAAGCACTTGAAGCAAGTTTAAAGATACTCACAGAAAAGACATCTAAGAATCCTGATGCCCAGTCAGTTGCTGAGCAGAAACAGTTGAAAACATTAACTGAGTCGTTAGCTGTTTTGACTGCAGAGAAGTCCAAAATGGAGGTCAACTTTCAATCTGACAAAAAGAAGTTACGCCATGAAGTTGAAATGttgCAAAACAGCATAAGGGATCTGGCTACAAGTGAAAAATCATTGAAGTATGAAAATGAAGGTTTGAGATCTAAACTAAGCCTGGAGAAACAAGACAGATTGCAAGAACAAGAAAGCTTACATCACATGATAAGAGACCTCCAGGAACAGCACGAGGCCAGAGTTGCATCTTTGGAAGCAAGATTGACTGAACTGTCAATATTTGTTGGGGAATATGACAGGCTTCGAAACTCAGATCAACAAGCCATTCTCACTCTGAAGGACCAAATTATGGAATTAGAGAATCGAACAACAAGGCAGCCCATTGACACTGAAATGGAGAAACAAGATTCACCGGAAAAAAAGGAATCTGCATCTTTACCATCAAGTGATGATGACATACAtgGAGCTTGCAGGGAACAGTATGACATGATAATCAGAGAACTTGAACATGTCAAGCAGTTGCAGTCCATCCAAAATATTCATGAATCAAGGTCACAAGAAGAAAATGTAGaatatgaaaaactaaaatctCAAAATCATAATTTGCATGAGAGAATCAATTCATTATGCAAGAAGTTACATCACATGGAGAGTGAACTATtactacaaaaacaaaatttaaaattgGCAGTAGAAAAGGAGAGTGAAAAATGGTCCTCAGAAGTGACCACTCTGAAACGACAACACGAGGCACAGCTGAATGAATTGGAAGATCAAATTAGACAGTTGAGAGAACGATCGCTTAAAATAATAGAAGAAAAGGACATTGAaatatctaaattaaaaattactttgaaaaATACATTTCCAGCATCAGTTTTGACTGGAGAATTAAGTCAGATGCTGAGTTTAGATTCCACCAGTGATAATTCAACAGAAAACAATGCTAAAagctCAGAAAATCCTCAGCTCTTCCATTTTTCTCAAGAAAATGCCAGAAATGTAGTTGAGGCCACATTATTAAGgaaacaaaactttaaattggAAGCTCAGGTACACGAGTTAACTAAAAAATGCGCTGCTACTTCCTTAATGATGAATGAACGGatagaaaaattgcaacaagaaattgaaaggcatACACTGAGCCAGTCTAGAGAAGGTGCAAATTTGGAATACTTGAAGAATGTTGTTCTTCGATACCTAACGTGTGATGATGAGAAGCATAAAGGACACATGCTCACTGCTATATGCACGGTACTGAGGTTCAGTAAAGCTGAATCCAGAATGGTTTTGTCTTCAAAGAAATAG
- Protein Sequence
- MSDQMSEQKNLIDKQKEQLVRYEKRLRDVVTAYKGLCKEKEALEASLKILTEKTSKNPDAQSVAEQKQLKTLTESLAVLTAEKSKMEVNFQSDKKKLRHEVEMLQNSIRDLATSEKSLKYENEGLRSKLSLEKQDRLQEQESLHHMIRDLQEQHEARVASLEARLTELSIFVGEYDRLRNSDQQAILTLKDQIMELENRTTRQPIDTEMEKQDSPEKKESASLPSSDDDIHGACREQYDMIIRELEHVKQLQSIQNIHESRSQEENVEYEKLKSQNHNLHERINSLCKKLHHMESELLLQKQNLKLAVEKESEKWSSEVTTLKRQHEAQLNELEDQIRQLRERSLKIIEEKDIEISKLKITLKNTFPASVLTGELSQMLSLDSTSDNSTENNAKSSENPQLFHFSQENARNVVEATLLRKQNFKLEAQVHELTKKCAATSLMMNERIEKLQQEIERHTLSQSREGANLEYLKNVVLRYLTCDDEKHKGHMLTAICTVLRFSKAESRMVLSSKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -