Basic Information

Insect: Ephemera danica
Gene Symbol: ARID2
Assembly: GCA_000507165.2
Location: KZ497928.1:62654-107822[-]

Transcription Factor Domain

TF Family: RFX
Domain: RFX domain
PFAM: PF02257
TF Group: Basic Domians group
Description: RFX is a regulatory factor which binds to the X box of MHC class II genes and is essential for their expression. The DNA-binding domain of RFX is the central domain of the protein and binds ssDNA as either a monomer or homodimer [1]. It recognize X-boxes (DNA of the sequence 5'-GTNRCC(0-3N)RGYAAC-3', where N is any nucleotide, R is a purine and Y is a pyrimidine) using a highly conserved 76-residue DNA-binding domain (DBD) [2].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 3.2e-15 1.9e-11 44.4 0.0 2 78 675 756 674 757 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	3.2e-15	1.9e-11	44.4	0.0	2	78	675	756	674	757	0.88

Sequence Information

Coding Sequence: ATGGCCAAAATTCTTAATAAGGACCCAGTCACATACCAAAAGGAACGTGATGGTTTCTTACGAGAACTCCGACAGTTCCATGATAGTCGAGGGACTCCATTTCGACGAGTGCCCAAGATCCACGGCCATGAAGTGGATTTGTATTTGCTGTACGTTCTGGTCACCGCACACGGAGGATGGGAGAAGGTGAACAGCCGCAGCGAGTGGGACAGCCTCTCGGAGCAGTTCGGGGTGCCGCGCAACTGCGTCAATGGAGGCATCGCTCTCAAGCAGATCTACATACGGTTCCTGGAGCGCTACGAGAAGCTACATTTCCTGGGCGAGGACGTGGACCGCGATGACGAGGACGGGAGCGGGGATGGGCGCAACCACAGACGGTGGTCCGCGCGCGTGCTGCACTCGGTGCCGCTTGCCTACAATCATCACCAGCATCAGGTTTCCGATCAAGCGCGGCTCACGATGGGTCTCTCCACGGAGACGTACAAATCGTCCGAGTACGACAGGCTGTCTCTGTCGCTGCTGTGTCCGCTGCCCAACGAGCACGACTTCGCCATCAACGTGTGCACCCTGCTGTCCAACGAGGGCAAGCACACCCTGCGTCTGGAGAAGTGTCCGCGCCTCGTCGACTTCCTCCTCGCCCACGCTGGCGTCTACACGCATGGCTCCCTGCGCGAGACGTTCACCACCATGTTCACCACCATGAGGCATCAGTCGGTGGACCGCTTCTGGTCCGACATCGTGGATGACCTGGACTTCAGAGAACTGACGTGTCCCCCTCGCAACAAGGTACCGGTGGAGGTGGCGCCGCCGGTGGAGAGTGTCGGGACCAAGTGCGAGAGCAACGAGAGGCTGCAGGACAGCCTACAGACTGACGGGGAGTGTGAGAGGAGAAACGACAACGACTGTGAAATGCTGGACCTGAGTGAACAACAAGCAAGTGTCAGTGAAAGCAAGTGTGAGACAGTGAGCAAGGACGACAAACCTAAGATCAGAATGATAGACGTGCCGGACGATCAGTTGCCGACACTACCGGACACCAATGGTGCCAGTGTGAGTCTGTTTTGGCCGCTAGTGGAGGAGATGTTGGATAAACCCTCCTCCCTGTTGAACCCCGAGGACTATGAACTGTTCAGTTTAGGCAGAGGCTTGGGGACAAAAGACCCACTCGGGCAAAGGGTCATGCAGGTAGCTACCATCATGAGGAACCTCAGTTTTGAGGAGGAGAACATACCTGTGCTCGGCAAGAATCCCACCTTCATCAGGTTCTCGCTACTGTGCTCACAGTCGCGCTACAGCTGTCTCTCCCAACTGGGCCTCGACATGCTGGGCCAGGTGGCGGGCGAGCTGATCGTGGAGGACCCCCAGACGGACACCTTAGCGGCCATGCTCATCAGCTCGGTCACCAAGGGACTGTCCTCGCCCGACCGCTTCATGGCCCTGTCGTGTCTTGAGGTGCTCAACAAAATCAGCCAGAACGAGGAAAATGAGGAGGTTATGCTGAAATGTCTAGAGCAGAAGGTATACGAGCAGATCTGCAGTTTCCTCACCTTGCACGACATCATGCTGCTCATCTACACCCTCGAGTGCCTGTATTCCCTCTCCTCCCTGGGCGAGCGAGCCTGCAACAGCATCGTGCGTGTGCATGGAGCCATCGACACCCTCGTCTCTCTCATCACTGTTGAGGCGCAGAGCTACGGTCCCCGAGCCTGCATTCTCATGAGGGTTGTGGAGAGACTGCCCGAGCAAGGGTCTCAGCAAAGCAGCGCAGCAGGGGTCATCTCCACGGTAACCACACTGGGCACCCAGACACCCACCATGACACAGCTCACCAACGTTGCCACCCCTGTGACCCCAGTGAGAGCGCCCGTCATCGTCAACAGACCGGCCACAGTCACCCCCCAAAGGCAACTAACCCCAGTGAGCATCGCGCCTGCCACATCGAGCAGCGTCCCCACTCTGGTGCAGTCTCCtcagcagctgcagcagcaacaccagcagcagcagcagttgcAGGAGAACGAGCAGTTCGCCCTGGCCTGGTTGCGAGCCACGTATGAGCCGGCCTCGGGAAGCTCCGTGGAGCAGACGGAGCTCTACCGCCAGTATCTGGCGTCCTGTGCCAAGATTGGCAGGAGAGGAGTCATCGCGTCACTGCACTTCCCCCGTTGTGTCAGGTCGGTGTTTGGCGGGACGGTGGGACCGAACTCGAAGCAACCGTCGGGCCAGGGCAACACGACGGAGTACCACTATGAGGGTATCAAGGTGCGCAAGAGTGCAGTGCCATTACTGGCCTCCCCTCCTGCCAGTACAGCCGCCAGTGTGCCAGTGCCCCCCACCCCTGCACTGCCTGCTGCCTCCCCCTCCCCTGCGTCCCCCACTGCTGCTAGCCTGGAACCAGTGCCCCCCGCCATCTCTCCCATTCTCAAGGCACAGCTCAGTGCCCCTCCCAAGCCGAGAGAGGCCACCAAAGCAGCAGAGAACAAGAGCCAGGTGGCGCAGAGGCAGCAGCAACAACGACTTCTCCAGCAGCAGCTCCAGTCTGGCCAACCTACGCTCCAGCCCCCCACTCCCAATGCCACCAACCTTCCCCCTCCAGCTCCTCACGTCTCTCCTCCACCGCTGCAACCCATCACCCCTGTACGAGCACCGGTCAGACCTACAATTCTCAGGGCTGCCATGGAACCCAAAGGTCGACAAGTCGCCAGGGTCAATGGAGCTCGAGGAGTACCCATCACATCTGCTCAGCAGTCCGAGGCCAACAAAGAAGCCAGCAGCACAGAGAAGAAGAGCGACAACGTTGCAGAGAACCACGTTGCAGCGAACTCCGCCCTCcttccccctccccctcccaaACCTCGCCTGGACGAGGACTCGGACTCTGCAGCGTCCACTGCCAACTCTCTGGTGTCCAGCAGTGGGGCGGTGTCCACAGACGGTGATGGGGAGAACTCGCTGACGAGTTTCGAAGGCATACTGCTCAATGGCATCCCTCACTCTCTCGATATCGATGCAGCCTCCAATGACGGCTCACAATCGTGTGACAGCGCCAAGGGCTCGTCGGCTCTGAAAATGAAAGGCATGCTGGCAGACCTACTGGAGAAGAAAGTGATCACCAAAGAGCCGGTCATCAACGGAGTGCTGGGCAAGGAGATCAGAATCAGCGACAAGGGTCTCGAAATCGTGGAGAATCACATAGACAAGGTGACGAAAGCCGAGAGCAAGCCTTCTGAAGTGGAGCAGATCAAATTGGGCGTGAAGAGAAGTGCAAACGGGGCAGCGGAGAGCCAGGATGCAAAGAAACCTCTCATCAGCACGCCAATCAACGGCAATGCACATTCCTCCGAAGTTAACTCTGACTCGAGCAACGAGCCGGTCAAGCCTGAGGAGAAGGTCGAGGTGAAACCAGATACCCCCATGACACCAGCCACTGCAGTAAGGCAGCTCATCATCGCCCAGTCCAGCACTCCGGAGCAGGTGCAGAACCAGCAGCAACTGATAGTGGGTCCTCGACAGATCATCATGACCCCGGGGTCACTGCAGCAAGGCCAGGTGATGATCTCGCAGGGCCAGATTCAGGTACAGCAGGGCAACCAGCAACTCAAGGGGCAAATCATAGTTCAGCCTGGTGGGCAGAGGCAAGTGTTGGTTCAGAACCCTCAGATGTTGGTGACGACGGCGCAGATGATGTCGCAGGGTCCCATGCTGATGACACAGGCCGGTGGTGGGCAGTTCATCGTGACACAGGCCCTGCAGGGATCCATAGGGGCCCCAGGGCAAGCGTACGTCGTGGCCCAGTCTCAGGGTCTGGTCCAGGGTCAAGCTCCCACCGTCCTCGTCACACAGACGCCTCAACAGCAGGGCACCAACGCCAAAACCATCATCATCCTGCACCAGCAAGCAGGCCAGAAGTTACCCACTCAGGGCCAGCAGGTGATGGTGCAACTACCTCGTTCTGCAGTGCAAGGGGGCAGCATCCAGGGTCTGACCTTGAGTCAAGGTGCCGGAGGCCAGGTGATGGTCTCCCTGCCCGGCTCCATGCCCATGATGGCCAAGACTGTGGCCACCACGAGCAGTTCCACGGTGGTGCAGGCGCAGAGGATCCTGGCACCCACCAAGCCAGTCGGCGTGTCCACCATCGTGCAGAACCCGGCCAAGAAACCTGTGTCCCAGCCGGTGTCGGTAGTCACCACCACCATGACTGCCACCACTCCGAGCAAACCTCCTGCGACCTCAGTGTCCCAGGCTGCAGCGGGCTCTGCAGCTCCTCCCAGACCTGCCACTCCGAGAGCAGGAGACACCACGGACTCTGCCAGAGCGACCACCAACAGTCCTGCCCCCACAACAACTCAACAACCTCAGAAGCCAGCGCCAGAAGTTTCTCCTTTCCTCTGCGAGTGGAGGGGATGCATGAGGAACTTCAAGTCTGCCAACGAGGTGTACATGCATGCGTGTCGCACCCACTGCCCCACAGGTTCCGAGGACGTGCAGTGTCTTTGGGAGCGCTGCGACGGAATGAAGAGGAAACGTTTCTCCCTCATGACTCACCTCTATGACCGTCACTGCAATAATGACGTGCTCCGCATGATGGCAGTGAGGAGAAAGCAGATGGCCCAGAGTGGGCGCAGTGAGATTCCTCCGCCACAGCCCCCTCCCCCACACCCAGGCTACGCCCCCAACGCAGCTCTGCACGCCATCAAGAGGCACGCGCTCGAGTTTGTCAACCCCAAGGAGCTGATGCAGAGAGCAGCCGctgctcctgctgctgctgctgttctcCCTCCTCCCACCCCTACTCGGGCCCCTGCAGCTCCTCCTCAGCCTGTGAGTCGGCCTGGGCCAAGCCCAGCGCAGCACGAGCAGCAAACTGCAGACACTGCTGCTACTACTGCAACTGCCAGATCCAGGCTCTCGTTTCAAGACGACAACGAGGGTCCGGTCACCAAGAGCATCCGCCTGACATCCTCGCTCATCCTGAGGAATCTAGTCATCTATTCCACTAACGGCAGGCGGTTTCTACGAAGCTACGAGCCTCACTTGGCGAGCGTGGCCCTCAGCAATGTGGAATCATCGCGCACCATCGCCCAGGTGCTGTACGACATGAGCCAGCGGGCAGAGCAGAGCTGA
Protein Sequence: MAKILNKDPVTYQKERDGFLRELRQFHDSRGTPFRRVPKIHGHEVDLYLLYVLVTAHGGWEKVNSRSEWDSLSEQFGVPRNCVNGGIALKQIYIRFLERYEKLHFLGEDVDRDDEDGSGDGRNHRRWSARVLHSVPLAYNHHQHQVSDQARLTMGLSTETYKSSEYDRLSLSLLCPLPNEHDFAINVCTLLSNEGKHTLRLEKCPRLVDFLLAHAGVYTHGSLRETFTTMFTTMRHQSVDRFWSDIVDDLDFRELTCPPRNKVPVEVAPPVESVGTKCESNERLQDSLQTDGECERRNDNDCEMLDLSEQQASVSESKCETVSKDDKPKIRMIDVPDDQLPTLPDTNGASVSLFWPLVEEMLDKPSSLLNPEDYELFSLGRGLGTKDPLGQRVMQVATIMRNLSFEEENIPVLGKNPTFIRFSLLCSQSRYSCLSQLGLDMLGQVAGELIVEDPQTDTLAAMLISSVTKGLSSPDRFMALSCLEVLNKISQNEENEEVMLKCLEQKVYEQICSFLTLHDIMLLIYTLECLYSLSSLGERACNSIVRVHGAIDTLVSLITVEAQSYGPRACILMRVVERLPEQGSQQSSAAGVISTVTTLGTQTPTMTQLTNVATPVTPVRAPVIVNRPATVTPQRQLTPVSIAPATSSSVPTLVQSPQQLQQQHQQQQQLQENEQFALAWLRATYEPASGSSVEQTELYRQYLASCAKIGRRGVIASLHFPRCVRSVFGGTVGPNSKQPSGQGNTTEYHYEGIKVRKSAVPLLASPPASTAASVPVPPTPALPAASPSPASPTAASLEPVPPAISPILKAQLSAPPKPREATKAAENKSQVAQRQQQQRLLQQQLQSGQPTLQPPTPNATNLPPPAPHVSPPPLQPITPVRAPVRPTILRAAMEPKGRQVARVNGARGVPITSAQQSEANKEASSTEKKSDNVAENHVAANSALLPPPPPKPRLDEDSDSAASTANSLVSSSGAVSTDGDGENSLTSFEGILLNGIPHSLDIDAASNDGSQSCDSAKGSSALKMKGMLADLLEKKVITKEPVINGVLGKEIRISDKGLEIVENHIDKVTKAESKPSEVEQIKLGVKRSANGAAESQDAKKPLISTPINGNAHSSEVNSDSSNEPVKPEEKVEVKPDTPMTPATAVRQLIIAQSSTPEQVQNQQQLIVGPRQIIMTPGSLQQGQVMISQGQIQVQQGNQQLKGQIIVQPGGQRQVLVQNPQMLVTTAQMMSQGPMLMTQAGGGQFIVTQALQGSIGAPGQAYVVAQSQGLVQGQAPTVLVTQTPQQQGTNAKTIIILHQQAGQKLPTQGQQVMVQLPRSAVQGGSIQGLTLSQGAGGQVMVSLPGSMPMMAKTVATTSSSTVVQAQRILAPTKPVGVSTIVQNPAKKPVSQPVSVVTTTMTATTPSKPPATSVSQAAAGSAAPPRPATPRAGDTTDSARATTNSPAPTTTQQPQKPAPEVSPFLCEWRGCMRNFKSANEVYMHACRTHCPTGSEDVQCLWERCDGMKRKRFSLMTHLYDRHCNNDVLRMMAVRRKQMAQSGRSEIPPPQPPPPHPGYAPNAALHAIKRHALEFVNPKELMQRAAAAPAAAAVLPPPTPTRAPAAPPQPVSRPGPSPAQHEQQTADTAATTATARSRLSFQDDNEGPVTKSIRLTSSLILRNLVIYSTNGRRFLRSYEPHLASVALSNVESSRTIAQVLYDMSQRAEQS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00650673;
90% Identity: iTF_00650673;
80% Identity: iTF_00650673;