Basic Information

Gene Symbol
ttk
Assembly
GCA_905220475.1
Location
HG992023.1:15038657-15048676[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.6e-16 4.9e-13 49.3 0.0 1 42 324 366 324 369 0.94

Sequence Information

Coding Sequence
ATGTCCCAACAGTACAGTTTACGATGGAACAACCACCAGCCGAACTTCATATCCATGTTCACGACTCTGCTGAACACGCAGACCCTCGTGGACGTCACGCTGGCTGCCGAGGGGAAGCATCTCCAAGCGCACAAAGTCGTGCTATCCGCTTGCAGCACTTATTTTCAGGCACTTTTCGTGGACAACCCGTCCCGTCATCCCATCGTCATACTCAAGGACGTTACGTTCGCGGATCTTCGCACGATGGTCGACTTTATGTACTACGGCGAGGTTAATGTCACTGAGGAACAGTTGCCGCAGGTGCTAGACACGGCCAAGCTTCTGAAGATAAAAGGGCTCACGGAGATGCCAGACTCGACTTCGCTGACACGAGCGCAGGGCGGCGCCCCGGGGACAGAATTCCAGGCGCCGGCGGAGCCCGTGGAGACTCCGCGAGTCTGCTCACCAGCCACTTCGCCCTCCATCAAACGGAGGAGACGCAGGAAGAGTTCCACTGGGTCACCATCGATGAATATGGTCGAAGAAAGCCGTGAGGACGGTCAGACTGTGGAGCTAGTGCGGGATGGCATCACATTGAGTAGCCTACCACAACGCAGGCGGGAGTTCCTCGACGAAAGACATCATGAGCCGTCCCAACAGACTCCGGAAAATGCTCATAATATGAACTTGGATCCGTTAGGAGTGGAGAACTCAGCGGCCATGGCACAAGGAGGCCAGTGGAGTATGATGGAGCACGCGTACCCGCGGTACTCTGGCGCTTGTGGGCTCGGAGGCGGCGCGATGCAGGAAGGCGGAGGGGGTCTATATATGGGGGGTGGGATGCATCCCCATAGCGAAGGGGACCTAGGGGAGTACGCGCACACTCTGGGCGTAGCGCACGCGTCCCCCGGGCCCAGTTGCGCCGAGCCACCGCTCCCCCAAGACCCCCCCGCCGCACCACCCAAGCGACGCCGCACCACCAACCCCCAATCAGAAGAAAACTTCCAACGCGCGCTTGAAGCTGTCCGCTTCGGAGGCATCGGGTTCTGCAAGGCCGCACGCATGTTCGGGGTCAACAACCGCACGCTCTGGCTCGAATACAAAAAGAAGGGATACCCTAACAACCGGCCGAGCATTAAAAGCCGCATCAAGCGAGAGCACACCACCCCGCCGCCGGATCACAAAGAAGAGCCGCCGCATCCCGACCAACAAATGGCGCTGCTTTGTCCTCCGCATCCCGTCTCGGTAGGCTTTATAGAGTCGCGTCCGATCGACTTCCCGCTTCAGGGTATGCCGCACGGATCCCCGTTGAATATTCTCGGGGTGAATTTCAACTCGATGCAATAG
Protein Sequence
MSQQYSLRWNNHQPNFISMFTTLLNTQTLVDVTLAAEGKHLQAHKVVLSACSTYFQALFVDNPSRHPIVILKDVTFADLRTMVDFMYYGEVNVTEEQLPQVLDTAKLLKIKGLTEMPDSTSLTRAQGGAPGTEFQAPAEPVETPRVCSPATSPSIKRRRRRKSSTGSPSMNMVEESREDGQTVELVRDGITLSSLPQRRREFLDERHHEPSQQTPENAHNMNLDPLGVENSAAMAQGGQWSMMEHAYPRYSGACGLGGGAMQEGGGGLYMGGGMHPHSEGDLGEYAHTLGVAHASPGPSCAEPPLPQDPPAAPPKRRRTTNPQSEENFQRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKKGYPNNRPSIKSRIKREHTTPPPDHKEEPPHPDQQMALLCPPHPVSVGFIESRPIDFPLQGMPHGSPLNILGVNFNSMQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00635310;
90% Identity
iTF_00649247;
80% Identity
iTF_00650151;