Basic Information

Gene Symbol
Bgb
Assembly
GCA_905220475.1
Location
HG992025.1:9389511-9398763[-]

Transcription Factor Domain

TF Family
CBF
Domain
CBF_beta domain
PFAM
PF02312
TF Group
Beta-Scaffold Factors
Description
Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.1e-81 9.2e-77 257.1 0.7 1 164 33 189 33 192 0.97

Sequence Information

Coding Sequence
ATGCACGCTATGAGCGATCCCGCAGCACTTGCTGGCATGCTTCCTTTTGACTCCATCGGACTGTACGAACAGCCTAAGCAGCGATTTATTTTCAAAATGCCTCGCGTAGTTCCTGACCAGAAGGGTAAATTTGAATCGGATGATCTCTTCAAAAGACTGAGCAGAGAAAGCGAGGTGAGGTACACTGGGTACCGCGACCGACCTCCAGAGGAGCGCCAGATGAGGTTCACGAGCGGCTGCCGAGAGGGCCATACGGAGGTAGCCTTTACCGCTACCGGCACTAACCTTCAGCTGGTGTTCGACCACTCACCTTACAACAATAGAGGCTGTGACTTCCAAAAAGAAAACGGCAAGGCCCACATAGTATCCCGATTCATCATGAACGGCGTGTGCGTGAGGTGGCGGGGTTGGATCGACTTAGAGCGGCTGGATGGCGCTGGTTGTCTGGAGTACGATGAGGAGCGCGCGGCTATAGAAGACGCGGCGCTGCGCGATCAGATCGAGAGATACAACCAGCGGCTGCGGGACTTTGAGGACAAGCAGCGCGCGTACCGCGAGCACGGGGAGGAGCTGCGCCACTCGCACGTCCACGCGCAGCGCTGCCACCAGCCGCGCCAGCCGCCGCACGCCGCGCATCCCTCGCACCCGCACCCGGCGCACCCCATCCACATCAAACCACACTCCCAGGGTGCTCTCATTTCTTAA
Protein Sequence
MHAMSDPAALAGMLPFDSIGLYEQPKQRFIFKMPRVVPDQKGKFESDDLFKRLSRESEVRYTGYRDRPPEERQMRFTSGCREGHTEVAFTATGTNLQLVFDHSPYNNRGCDFQKENGKAHIVSRFIMNGVCVRWRGWIDLERLDGAGCLEYDEERAAIEDAALRDQIERYNQRLRDFEDKQRAYREHGEELRHSHVHAQRCHQPRQPPHAAHPSHPHPAHPIHIKPHSQGALIS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00837229;
90% Identity
iTF_00761386;
80% Identity
-