Eero006306.2
Basic Information
- Insect
- Ennomos erosarius
- Gene Symbol
- lrrfip2
- Assembly
- GCA_963580505.1
- Location
- OY756981.1:15329217-15346464[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 6.4e-76 1e-71 242.5 27.0 1 297 124 407 124 410 0.88 2 4 2 3.3e+04 -6.3 6.1 12 25 428 441 397 493 0.53 3 4 2 3.3e+04 -5.4 4.2 11 30 474 493 461 539 0.58 4 4 2 3.3e+04 -6.4 10.5 11 44 568 605 555 626 0.42
Sequence Information
- Coding Sequence
- ATGGGGCATCGATCAGAAGTGGCCACGCCTGATAACAGCGACGAGGAGAGTGGGGATGCCTTCACTGACGGAGACTTCGGAGACTCCGACGATGATACTGTTCTCGAACAAAATGATACCAAATCTTCAAACATCCCCATTAACGAGACGGTCaatgattcaataaaaaaaagtatcacCAATGGAAACTGCTCCCATAATGAACATGGGGCATCACCTGCGGAAGATCAGCCAAAAGTGAACGGACGTAACAACACTGACAATCAAAGTGATGTGGAAAGTTATAGTGCAACGTCTGAAGTGAGACGAGATTCGCATGGAGATCAAAATCCTTCTATTGTTGGAATCCTTGGAGACCAGCATAATCACGCGGAACAGCGGCTAGCGGCGCgacgcgcggcgcgggcggagGCGCGCGAGATACGCATGCGAGAACTAGAGCGGCAACAACGGGAACAAGAGGACCATGCCGATAAGGCGTATGACATGTATGCAGAGACGGTCGGGAGGCGCGGCGGCACGCGACTCGCGACGCTCAGCCCCGCCGCCAGTCTCGCGCACTCACCGCGGCGGAGCTCCGAGGACTCCGCGGATGACACCTTTAACATTAAGGACTTAAGGCACGAACTGAAAGAAGTAGAGGAAAAGTTCCGCAAGGCGATGATCCTGAACGCGCAGCTGGACAACGATAAAGCGGCGCTACATTACCAGCTCGAATTGCTGAAGGACCGAATCTTAGAGCTGCAAGAAGAACATGCGCAATTACAGCGCGAACACAAAGAGAAATGTTCAGCGCACGAGCGGCTAAAACGCGAGCACGTGACGCTGGAGCGCGAGCTGTCGGGCGCGCGGGACTCGGTGCGCGCGCGggacgccgccgccgccgccgccgggcTCGCCTTCGCCGAGGCCGCGCCCGGCGCCACGCACGCGGAGGGCTTCGGGGACGTGCCGCCGCTCGCCCTGCTCTCCCAGGAGCAGGACCGGGCGCTGGCGGACCAGGGGGAAGGCACGCTTGACGTGCGGTTGCAGAAGTTGGTTACAGCCAAACAAGAGCTAGAATCAGAAGTCCGTAAACTGAAGATAACTTTGAACGAGGAGCGAGCGGCGCGACAAAACGGTGTCGCGGGACGACACGATCAAGAGCTAGAGGAAGAGTtgGAGACGCTGCGGCGGTCGGTGTCGGAGGCGAAGGGtcgcgcggcgcgcgcggaggcggAGGCGGCGCTGCAGGCCGCCGGCGTGGCGCGCCTCGAGGCGCAGCTGCACCGCCACCGCGCGCTCAGTGACGCGCGCGACACCAGGGAGGACCAGCTCCACCAGGAGCGCCGCCGGCTGCAGCGGGAGTGCACGCCAGGCGGAGTGACGCTGCAGGCCGCCGGCGTGGCGCGCCTCGAGGCGCAGCTGCACCGCCACCGCGCGCTCAGTGACGCGCGCGACACCAGGGAGGACCAGCTCCACCAGGAGCGCCGCCGGCTGCAGCGGGAGTGCACGCCAGGCGGAGTGACGCTGCAGGCCGCCGGCGTGGCGCGCCTCGAGGCGCAGCTGCACCGCCACCGCGCGCTCAGTGACGCGCGCGACACCAGGGAGGACCAGCTCCACCAGGAGCGCCGCCGGCTGCAGCGGGAGTGCACGCCAGGCGGAGTGACGCTGCAGGCCGCCGGCGTGGCGCGCCTCGAGGCGCAGCTGCACCGCCACCGCGCGCTCAGCGACGCGCGCGACACCAGGGAGGACCAGCTCCACCAGGAGCGCCGCCGGCTGCAGCGGGAGGCGAGAGAAGCCCTCAACCGAGTTGAAGAATTGGAGACGGAGAACAGCCATCTGACGAAACGGCTCGACAAGCTCAAGAACGCCAAGTCTGCGCTACTCAAGGAACTGTGA
- Protein Sequence
- MGHRSEVATPDNSDEESGDAFTDGDFGDSDDDTVLEQNDTKSSNIPINETVNDSIKKSITNGNCSHNEHGASPAEDQPKVNGRNNTDNQSDVESYSATSEVRRDSHGDQNPSIVGILGDQHNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAETVGRRGGTRLATLSPAASLAHSPRRSSEDSADDTFNIKDLRHELKEVEEKFRKAMILNAQLDNDKAALHYQLELLKDRILELQEEHAQLQREHKEKCSAHERLKREHVTLERELSGARDSVRARDAAAAAAGLAFAEAAPGATHAEGFGDVPPLALLSQEQDRALADQGEGTLDVRLQKLVTAKQELESEVRKLKITLNEERAARQNGVAGRHDQELEEELETLRRSVSEAKGRAARAEAEAALQAAGVARLEAQLHRHRALSDARDTREDQLHQERRRLQRECTPGGVTLQAAGVARLEAQLHRHRALSDARDTREDQLHQERRRLQRECTPGGVTLQAAGVARLEAQLHRHRALSDARDTREDQLHQERRRLQRECTPGGVTLQAAGVARLEAQLHRHRALSDARDTREDQLHQERRRLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -