Basic Information

Gene Symbol
ttk
Assembly
GCA_963580505.1
Location
OY756977.1:14950188-14957985[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.3e-16 5.3e-13 49.3 0.0 1 42 323 365 323 368 0.94

Sequence Information

Coding Sequence
ATGTCCCAACAGTACAGCTTACGATGGAACAACCACCAGCCGAACTTCATATCTATGTTCACGACGCTGCTGAACACGCAGACTCTCGTGGACGTCACGCTGGCTGCCGAGGGGAAACATCTCCAAGCGCACAAAGTTGTCCTGTCCGCTTGTAGCACTTATTTTCAGGCACTTTTCGTCGACAACCCGTCCCGTCACCCCATCGTCATACTCAAGGATGTTACATTCGCGGATCTGCGCACGATGGTCGACTTCATGTACTATGGCGAGGTTAATGTCACCGAGGAGCAGTTGCCGCAGGTGCTAGACACGGCCAAGCTTCTGAAGATCAAAGGGCTCACAGAGATGCCGGACTCGACATCGCTCACACGAGCGCAGGGCGGCGCCCCGGGGACTGAATTCCAGCCGCCGGCGGAGCCCGTCGAGACTCCGCGCGTCTGCTCACCAGCCACTTCGCCCTCCATCAAACGGAGGAGGCGCAGGAAGAGTTCCACTGGGTCCCCATCGCTGAACATGGTGGAAGAGGGCCGCGACGACGGTCAGACTGTGGAACTGGTGCGGGATGGCATCACCCTGAGCAGCCTGCCACAGCGCAGGCGGGAGTTTCACGATGAAAGACACCATGAACCGTCCCAGCAGACTCCAGAAAATGCTCACAACATGAACTTAGACCAGTTAGGAGTTGAGAACTCTGCGGCCATGGCACAAGGAGGCCAGTGGAGTATGATGGAGCACGCGTACCCGCGGTACTCTGGCGCGTGCGGTCTCGGCGGCGGCGCGATGCAGGAAGCGGGGGGGTTGTATATGGGGGCCGGGATGCACCCCCACGGCGAGGGGGATCTAGGGGAGTACGCGCATACGCTGGGCGTGGCGCACGCCTCCCCCGGGCCCAGCTGCGCCGAGCCGCCGCTCCCCCAGGATCCCCCCGCCGCGCCCCCCAAGCGCCGCCGCACCACCAACCCACAGTCAGAAGAAAACTTCCAACGCGCCCTCGAAGCCGTACGCTTCGGAGGCATCGGGTTCTGCAAGGCAGCGCGCATGTTCGGGGTCAACAACCGCACGCTCTGGCTCGAATACAAAAAGAAGGGATACCCCAACAACCGACCCAGTATCAAAAGCCGCATCAAGCGAGAGCACACCACCCCGCCGCCGGATCACAAAGAAGACCCTCCGCATCCTGATCAACAGATGGCGCTGCTTTGCCCGCCGCATCCGGTCTCCGTGGGCTTCATAGAGTCGCGTCCGATAGATTTCCCGCTCCAGGGCATGCCGCACGGATCCCCGTTGAATATTCTCGGTGTTAATTTTAATTCGATGCAATAG
Protein Sequence
MSQQYSLRWNNHQPNFISMFTTLLNTQTLVDVTLAAEGKHLQAHKVVLSACSTYFQALFVDNPSRHPIVILKDVTFADLRTMVDFMYYGEVNVTEEQLPQVLDTAKLLKIKGLTEMPDSTSLTRAQGGAPGTEFQPPAEPVETPRVCSPATSPSIKRRRRRKSSTGSPSLNMVEEGRDDGQTVELVRDGITLSSLPQRRREFHDERHHEPSQQTPENAHNMNLDQLGVENSAAMAQGGQWSMMEHAYPRYSGACGLGGGAMQEAGGLYMGAGMHPHGEGDLGEYAHTLGVAHASPGPSCAEPPLPQDPPAAPPKRRRTTNPQSEENFQRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKKGYPNNRPSIKSRIKREHTTPPPDHKEDPPHPDQQMALLCPPHPVSVGFIESRPIDFPLQGMPHGSPLNILGVNFNSMQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00635310;
90% Identity
iTF_00649247;
80% Identity
iTF_00649247;