Efla010662.1
Basic Information
- Insect
- Endotricha flammealis
- Gene Symbol
- egg
- Assembly
- GCA_905163395.1
- Location
- LR990882.1:4745639-4772558[-]
Transcription Factor Domain
- TF Family
- MBD
- Domain
- MBD domain
- PFAM
- PF01429
- TF Group
- Unclassified Structure
- Description
- The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.1 7.6e+03 -2.5 0.0 31 48 298 315 289 319 0.72 2 3 2.3 1.6e+04 -3.5 0.0 29 38 1003 1012 969 1013 0.86 3 3 8.6e-13 5.9e-09 36.3 0.0 4 75 1044 1108 1041 1110 0.89
Sequence Information
- Coding Sequence
- ATGCCTCTTGCCCTGTGTGGCGGGGCCACGGGAAACTGGGATACAACCGCGACCCCGCCAGGGCCGTCCGGCCAAGGTACCAGCCGGACCCGCTCGCCCCCGATACGCTCCGTCAGCAGTACACCGCATCCAGGTGCACTGCCGACACCGAGGACCATCGCTCCCTCAAGACGACGGGCCTTCCCCGGCCCGCCCGTCTCGGCTGGGCTATGGTCCCCGTCCACTCGGCGATCGCACCCACTGTGCCGACCGCCAGCCAACGGCCACACCACACTTATTCAGCGTGGCGCGGCCGTCAGCTCCGCTCGTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCGTGGGTGGAGGACCCACGGGTTACGGTATGCGCCGCACGCCGGCTGGTAAGGCCGGCGCCCACTAGGGCGTCCGCGTCAACCCGCGAGCCGAGCGCAGGGAGTGGACACACCCGTCCGCCTGCAACCCGCACCCGGCGAAACGCAGGGACCGGACCCCGCTCGTCCCCCTCAACCCGCGGCTCGCCGCAACTCGAGCGCAGGGAGGGGACCCACGTGTCGGGACTTCAGCCGCCGGCAAGGACGCGCCGGCGTTGCCCGGGGTGGACCACGTGGAGGATCTGTTACTCTCATTTTTTACTGTGCGTGATGTCTTCACCTATAATTGTAGTGGCACTTGATGACGAATATTTGTGTTGTGTTTTATATTGTAACGGTGTACTCTATGTTGTTACGGAAACTACAGAAGCTGACAAGCCAAGGGAACAGACCAAGTGCATCAATGGATCGTGCGAGAGTGGACCAGGAGTACAGTATATGCTAGCAGATCCATCGACCATAGCTTACTATGACGCAGGGAACAAACGTAAGGCCGTCGTATGCCTGCCTTGCGGAGATAAAGTCAAGGAGAGGACACAGGACTTAATTAAAGGTATAAAAGATCTGACACCAATCTTAGATTTGGATATGAAGAATTTACCCTCGGATTTAGTAGAGATATCTGACTCGGAGTCGGAGAGTGAAGCAGACGGAGACAGCGATACGAAAGAGAAGATAGGAGAGAGTGGAGCCAAATTCCTAGAAGAGCAATTGGCTGATATGATTAACGGAACATGGCGCAAATACAAGTTGGACGAGAGACTTGAGCACGCGCACACTGAGCTCAATAAGCAGTTGCAGTTCTTGGAAGACGAATGCAAAACAATTGACACACTTCTGAACGAGTGCCAAGTGTCAACGGATAAACTACGCAACGAATTATACGCAACTTTCGAGACTGAGCGACGCGAGCTGTCTTCTGTGATTATTTACGAAAACAGCGTTGTACCAGAGAAATCTGACCTCAATGAGATTGAAACACGTGCCAAACGCCGAATGTCTTCTGCTGCCGAACTTCCGGCCAAAAGGCCCGCTATCCCACTTGGATACACGACACGGGACGCGGAAACCAAAGTTTCTAATGCACAGAAAGACGTATCAGTAGTGAAGCTATCAGCGGAAGCCGCGCCGGCGGACTTGCCCCCTCCGGGTACAATCGCGCGACCGGTGCTTCGCCCCGGCTTGCTTCTGTTCGCAATGCGCAACTCGTTCTGCTCGTGGCTGCGTGCGCGTATCATCGAGGTCGTTAATAAGGCTAATAGCTCGTCCGGCTCGTTCACAATGTGTCGTGTGAAGTTTGAGAGCAAAGTGAAGGTGTGTACAAGAGTGTTGCCCGCCAGGTACCTCGCTTACGCAGAGCCCGCTGACGTCAGACTGACCATCGGTACTAGAGTAATAGCTCTATTCAAAGACTCTTCTTCGGAGGAGACCAAGAAGGAGTTGTTTTACTCTGGAATCGTTGCCGAGATACCCAACCCAGTCAACAATTATAGATACCTAATATTCTTCGACGACGGATACGCACAGTACGTGCGACACAACGATACGCGCGTAGTCTGCGAGAGCGCACAACTAGTTTGGGAGGAAGTACATCCATTCTCAAGGGAGTTTGTTAAGCAATATTTACTCGCTTATCCAGAAAGACCCATGGTACGGTTACATGCTGGACAGAGTCTCAAGACTGAGTGGAATGGGCGATTGCCGGAAGCGTCGTGGAAGTTAAGGCTTCGCTGTACCCATGACACTTCCACTCTGGCAATGATGGAGCGCCGCGGTGTTGCGAGTCCCACACAAGCCCTCCGTCCCCCGGCGGAAGGTATCGTGCATAAGGCATTTGCCGTGAAAGGTATCGTGCATAAGGCATTTGCCGTGAAAGGTATCGTGCATAAGGCATTTGCCGTGAAAGGTATCGTGCATAAGGCATTTGCCGTGAAAGGTATCGTGCATAAGGCATTTGCCGTGAAAGGTATCGTGCATAAGGCATTTGCCGTGAAAGGTATCGTGCATAAGGCATTTGCCGTGAAAGGTATCGTGCATAAGGCATTTGCCTTGAAAGGTATCGTGCATAAGGCATTTGCCGTGAAAGGTATCGTGCATAAGGCATTTGCCGTGAAAGGTATCGTGCATAAGGCATTTGCCGTGAAAGGTATTGTGCATAAGGCATTTGCCGTAAAAGGTATCGTGCATAAGGCATTTGCCGTGAAAGGTAAATGGTGGATATCTCGTGTGATAAAGGTCGACGCATCTCTAGTGCAAGTGCATTTTGAAGATGACAGAACTGAATGGATATACCGCGGGTCAACGCGTTTGGCGCCTTTGTATATGGAGCTGCAAGCGGCGGAGAGACAGAGGTCCAGACCACTGCCAAGGAGCAACCAGAGACGGATGAACATGCCCTACGTTGAGTACACTCGTTCGGACGAGCAAGGCAAGGACACTGCTGCACAGCAGGCACAAACAGCTCAAACCAACGAGGAGATACGCCGCCAGAGAGCCGTGGCGAAGAAGTCGACGACGCCGATGGGCGTGCCGCTGATGGGCATTCCGCCGATGGGCGTGCCGCATCCCGCGCACGCCCCCGCCACGCCCAACCTCGACAGCGTCACCAGCAGGGTCGTGTATTATACACCAAAGAACGCAGTGAAACCGCTCAAAATGTCGACACATCAATGTACGCCGAAGTGCAAGAGGAATGATGTGCTAGCTTTGAAAGACTTGAGGACTTACAATCCATTGGCGAAACCACTTTTGAGTGGATGGGAGAGGCAAGTGGTCCGTTTCAAAGGACACAAGGAAGTGATGTATCGAGCGCCATGCGGCAGGCGCTTACGCAACATGTTAGAGCTACACATGTATTTACAATGCATACAATCAGATATGGCGGTAGATTTGTTCGATTTCCACCCAAGCACACATTGTTTAGCCGAATTTGTGCTTAACAAGTGTCTCGTTGGTAAAAAGGACCTTTCCCATGGGAAAGAGAACGTGCCGGTGCCGTGCGTGAACTATTACGACGAATCTCTACCTGAGTTCTGCTCCTACAATACTGAGCGTACGCCCACCGCTGGGGTCCCGCTAAATCTGGACCCAGAGTTCTTGTGTGGCTGCGATTGCACTGACGACTGCGAGGACAAAACCAAATGTTCCTGTTGGAAGATGACACTAGAGGGAGCTCGTACAATCGGCCTCGAAGGTCACAACGTTGGCTACGTGTACAAAAGGCTACCAGAACCACTACCTTCCGGGATATATGAGTGTAACTCTAGGTGTAAGTGCAAACAAACTTGCCTCAATCGGGTGGCTCAACATCCCTTGCAGTTGAAACTACAAGTGTTCAAGACCTACAACCGTGGTTGGGGAATTCGGGCACTCAACGACGTGCCCAAAGGCGCCTTCCTCTGCGTCTACGCGGGCAACCTGCTCACGGACGCCACGGCCAACTTGGACGGTCTCAACGAAGGTGACGAGTATCTTGCAGAGTTGGATTACATTGAAGTGGTGGAGCAAATGAAGGAGGGTTACGAGGAAGACGTGCCTGAAGTTGACAAGAAACTCGACAAGGCTGCACAGAAGAATACGTCACCAGAGTCTTCAGAGGAGTCGAGTTCGGAAGAAGAAGACAATACGAACGATGACAAGGAAGATGGTGACTTCAAGCCAGGATTCATAGGGTTGGGACTGACTGACTTCGATAAACGCCTACGCAAGAGAGACAAGAAAAAGGCTGATAAAGAAAAGGCAGCGAACGAGAAAGGGAAAGATATTGAGGTGAAGAAAGAGATGGTAGATGAAGACGGATGCATCACTATAAGCGATGATGAGGAAGCAAGAGAGCCGTCAAGGTTCATGGCGCAGGCTGGCATGGGGGCCAATGAATTTGTATCAAAATATAAGTGA
- Protein Sequence
- MPLALCGGATGNWDTTATPPGPSGQGTSRTRSPPIRSVSSTPHPGALPTPRTIAPSRRRAFPGPPVSAGLWSPSTRRSHPLCRPPANGHTTLIQRGAAVSSARXXXXXXXXXXXXXXXXXXXPWVEDPRVTVCAARRLVRPAPTRASASTREPSAGSGHTRPPATRTRRNAGTGPRSSPSTRGSPQLERREGTHVSGLQPPARTRRRCPGWTTWRICYSHFLLCVMSSPIIVVALDDEYLCCVLYCNGVLYVVTETTEADKPREQTKCINGSCESGPGVQYMLADPSTIAYYDAGNKRKAVVCLPCGDKVKERTQDLIKGIKDLTPILDLDMKNLPSDLVEISDSESESEADGDSDTKEKIGESGAKFLEEQLADMINGTWRKYKLDERLEHAHTELNKQLQFLEDECKTIDTLLNECQVSTDKLRNELYATFETERRELSSVIIYENSVVPEKSDLNEIETRAKRRMSSAAELPAKRPAIPLGYTTRDAETKVSNAQKDVSVVKLSAEAAPADLPPPGTIARPVLRPGLLLFAMRNSFCSWLRARIIEVVNKANSSSGSFTMCRVKFESKVKVCTRVLPARYLAYAEPADVRLTIGTRVIALFKDSSSEETKKELFYSGIVAEIPNPVNNYRYLIFFDDGYAQYVRHNDTRVVCESAQLVWEEVHPFSREFVKQYLLAYPERPMVRLHAGQSLKTEWNGRLPEASWKLRLRCTHDTSTLAMMERRGVASPTQALRPPAEGIVHKAFAVKGIVHKAFAVKGIVHKAFAVKGIVHKAFAVKGIVHKAFAVKGIVHKAFAVKGIVHKAFAVKGIVHKAFALKGIVHKAFAVKGIVHKAFAVKGIVHKAFAVKGIVHKAFAVKGIVHKAFAVKGKWWISRVIKVDASLVQVHFEDDRTEWIYRGSTRLAPLYMELQAAERQRSRPLPRSNQRRMNMPYVEYTRSDEQGKDTAAQQAQTAQTNEEIRRQRAVAKKSTTPMGVPLMGIPPMGVPHPAHAPATPNLDSVTSRVVYYTPKNAVKPLKMSTHQCTPKCKRNDVLALKDLRTYNPLAKPLLSGWERQVVRFKGHKEVMYRAPCGRRLRNMLELHMYLQCIQSDMAVDLFDFHPSTHCLAEFVLNKCLVGKKDLSHGKENVPVPCVNYYDESLPEFCSYNTERTPTAGVPLNLDPEFLCGCDCTDDCEDKTKCSCWKMTLEGARTIGLEGHNVGYVYKRLPEPLPSGIYECNSRCKCKQTCLNRVAQHPLQLKLQVFKTYNRGWGIRALNDVPKGAFLCVYAGNLLTDATANLDGLNEGDEYLAELDYIEVVEQMKEGYEEDVPEVDKKLDKAAQKNTSPESSEESSSEEEDNTNDDKEDGDFKPGFIGLGLTDFDKRLRKRDKKKADKEKAANEKGKDIEVKKEMVDEDGCITISDDEEAREPSRFMAQAGMGANEFVSKYK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -