Efla009135.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Endotricha flammealis
Gene Symbol
PAXBP1
Assembly
GCA_905163395.1
Location
LR990855.1:15377654-15390290[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 8.5e-17 1.4e-12 48.7 0.1 4 190 500 667 498 676 0.68

Sequence Information

Coding Sequence
ATGGCGTTATTTCGTAAACCGAAGAAAATTCAGCGACGTGTGTTTTGTGCTGATGATGACGAGGATGGTGATCCGGAGCCCCCGCCTCCACCTGTGATCAGCAACAAAAAGGAGAATAAGCCGGTTAAAAGCAAAACATTACTTAGCTTTGTTGACGAGGAGGAGGAAGGTGAAGTATTCAAAGTAAAAAAGTCATCGCAGAGCAAGCGACTTGCGAAGCAACGGGAGAAGGAGAAGAAAAAGCCCCCAGATGGTGATAATAATAAATATGACAGTACGATCACTGAGGACGTAAACAATGCAGCGGAGGCGGAAGAGAAAAAACCAAAGAAGAAAATAACATTGGAAGGCTTGATTCTGTCCGGGAGGGAGGCACTCGCAGCAGACGGCGCCGGGGATGTCTCCGATGACAGCGTGAACGAAGAGGAGGATAATAGGGGGTTCCACCAGTACCGTGCGGACTCTGTGCGGGCTGCTCTAGCGGCGTCGCATATCCCGGATGCGGCGCTCATCCACGCCGCGCGCAAGACCAGACAACAGGCTCGCGAGTTGGGTGATTTCATTCCACTGCAATCGGAGGCGCCGCCCGGTTCCCGGCTGGTGCGCGAGGACGGCTCCGGTGATGACGAAGATGAGGGTCGGCTGTTGGTGCGAGGTTTGGACCTGCCTAGCGACAAGCCGAAACGTGGCACCACTGCGGCGGCTTCGGATGAGGAGCTGGACAGCGAGGCCGAGGAGTGGGAGGAGCAGCAGATGCAGAAGGCGATGCCTGCCATTGCTGATTTTTCTGCAGGAGTGGAGCTGAACCCGTTCGCGCGCGCGCCCTTGCCCGCGCGGCTCGAGCCGCCCGCCGCGCTGCGCCCGCTGCAGCCGCTCGCCTCTGCGCACGAACTCGTCGCTGCGCTGCGCGCCAGATTAGAAGAACTGCACATGGAGCGCGATAAGGCCTCATCGCACATGGAGCAGGTGCGCGAGCGGCTGGCCGCGGCGGCCGAGACGCGCGCGACGCGGGCCGCGCGCACGCCGCGCCTCGACGCCGCCTATCGGCGTGCGCAGGCCGCGAGGGGATACCTTACTGATCTCATCGAGTGTCTCGACGAAAAGTTGCCAAGGATAGAAGCGTTGGAGGCGCGTGCGCTGGCGCTGCACCGGCGACGTTGCACGTTCCTGACGACGCGTCGCCGCGACGACCTTCGCGACCAGGCGCATGACGCTCTTCAACTTGCAGCTCGCCCTGGCTCCGTGAAGCCAGTAGATTCAGAAGAGAAGATCCGTCGCGCGGCCGAACGCGAAGGACGGCGTCGCGCTCGGCGGCTCAAGCGCGACGCGGCCGCCGCCGCCGCGGGGACTACGGTGCGGCATCGCGACGGGGACTCCAGTGATGACGAACTGCCGCCGGCGGAGCAACAGCACGCGGCGCAGGAGAGAGAGGCTATCCTGGCGGCGTCGGCGGCGGTGTTCGCGGACGCGCTGCCCGCGTGGCGTTCGCCGCGCTACGTGTGCGCGCGACTGGCAAGATGGCGGCGCCGCGACAGAGCGCTCTACCAGGACGCATACGTCGCGCAGTGCCTGCCCAAGCTGCTCGCACCCTACGTCCGACACCAGCTCATATTATGGAATCCCCTGGCTGACGAGGACAATGAAGACTATGAGAGAATGGACTGGTACAAATGTCTGATGATGTACGGTGTTCGTGTGGAGAAATTGTCTAGTGAGTCGGAGCAATCGGACTCGGAGCAAGAATACACGCCAAGCGTCTCTGAGAGAACAGTGAGGGAAGACACCGACCTGATGCTCGTACCTACAATCGTTAGTAGGGTGGTACTGCCGAAGCTTACTGAGCTCGTGGAGCACGCGTGGGATCCGATGTGCGTGCGCGCGTGCGTGCGCCTGCGCCACTTGCTGCTGCGCTTGGCGGCGGCGCCGGGCGCGGCGCGAGGCGGCGCCTTGGCACGGCTCGCCGCCGCCGCGAGGGCGCGCCTCGCCGCTGCGTTGCAGGCGGACGTGTTCCTGCCTGCGCTACCGCCACAGGTGGTGGAGGGCGCGGGCGGCGCGTTCTGGCGACGCTGCCTCGGCGCGGGCGTGCGGCTGCTGCGCGCCGCGCTGGCGCTCTGTGCGCCGCCGGAGCTGCTGTGCGCGGACCCCGCTGTCATGCAGCTCATCGAAACACTATGCTGTGCGGCGGGCGCTGCGCCGGGCCCCTTGGCGGCGCTGGCGGCGTCGGCTTTGGCCGCGTCTCTGCCCCGCCAAGGGCCGCTAAGGGCCATCGCGCTGCGCCGCCTCGCCGCGCTGTCGCAGCTCGCGCTATCAAGGCTACAGACCGACAACCCTATGCACCTAAAAGCTTTGGAGCAAGCGAGAGCTGTGATAGCGGAGGCGCGCGCCGTAGAGTGA
Protein Sequence
MALFRKPKKIQRRVFCADDDEDGDPEPPPPPVISNKKENKPVKSKTLLSFVDEEEEGEVFKVKKSSQSKRLAKQREKEKKKPPDGDNNKYDSTITEDVNNAAEAEEKKPKKKITLEGLILSGREALAADGAGDVSDDSVNEEEDNRGFHQYRADSVRAALAASHIPDAALIHAARKTRQQARELGDFIPLQSEAPPGSRLVREDGSGDDEDEGRLLVRGLDLPSDKPKRGTTAAASDEELDSEAEEWEEQQMQKAMPAIADFSAGVELNPFARAPLPARLEPPAALRPLQPLASAHELVAALRARLEELHMERDKASSHMEQVRERLAAAAETRATRAARTPRLDAAYRRAQAARGYLTDLIECLDEKLPRIEALEARALALHRRRCTFLTTRRRDDLRDQAHDALQLAARPGSVKPVDSEEKIRRAAEREGRRRARRLKRDAAAAAAGTTVRHRDGDSSDDELPPAEQQHAAQEREAILAASAAVFADALPAWRSPRYVCARLARWRRRDRALYQDAYVAQCLPKLLAPYVRHQLILWNPLADEDNEDYERMDWYKCLMMYGVRVEKLSSESEQSDSEQEYTPSVSERTVREDTDLMLVPTIVSRVVLPKLTELVEHAWDPMCVRACVRLRHLLLRLAAAPGAARGGALARLAAAARARLAAALQADVFLPALPPQVVEGAGGAFWRRCLGAGVRLLRAALALCAPPELLCADPAVMQLIETLCCAAGAAPGPLAALAASALAASLPRQGPLRAIALRRLAALSQLALSRLQTDNPMHLKALEQARAVIAEARAVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-