Ecoc049905.1
Basic Information
- Insect
- Endomychus coccineus
- Gene Symbol
- -
- Assembly
- GCA_958510875.1
- Location
- OY294070.1:67351382-67351919[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.0025 31 6.2 0.0 28 57 5 34 3 40 0.88 2 3 0.00063 7.8 8.2 0.0 28 57 72 101 70 107 0.90 3 3 0.0022 27 6.4 0.0 29 57 119 147 116 152 0.88
Sequence Information
- Coding Sequence
- atgtttttcttaggaaaaagttcgaagacaggaaataaaacgttcggaattattgaattgcgtaacttcctgacgggaagagctatcgacttgcagttagtgccaatcgcatcagaatcatgggattggttggaaacgggaagagatatcgacttgcagttagtgccaatcgcatcagaatcatgggttggttataagtatatgtttttcataggaaacaattcaaagacgggaaataaaacgttcggaattattgaattgcgtaacttccagacggggagagatatcgacttgcagttagtgccaatcgcttcagaatcatggggttggttggaagaatatgtttttcttaggaaaagttcgaagaccggaaataaaacgttcggaattattaaattgcgtaacttccagacgggaagagatatcgacttgcagttagtgccaatcgcatcagaatcatga
- Protein Sequence
- MFFLGKSSKTGNKTFGIIELRNFLTGRAIDLQLVPIASESWDWLETGRDIDLQLVPIASESWVGYKYMFFIGNNSKTGNKTFGIIELRNFQTGRDIDLQLVPIASESWGWLEEYVFLRKSSKTGNKTFGIIKLRNFQTGRDIDLQLVPIASES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -