Basic Information

Insect: Endomychus coccineus
Gene Symbol: -
Assembly: GCA_958510875.1
Location: CAUEHT010000051.1:418869-423304[+]

Transcription Factor Domain

TF Family: RHD
Domain: RHD domain
PFAM: PF00554
TF Group: Beta-Scaffold Factors
Description: Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 0.012 1.5e+02 4.0 0.0 29 57 40 68 34 72 0.89

2 6 0.0093 1.2e+02 4.4 0.0 29 57 113 141 104 145 0.88

3 6 0.36 4.4e+03 -0.8 0.1 75 116 184 224 174 236 0.77

4 6 0.013 1.6e+02 3.9 0.0 29 57 240 268 235 271 0.89

5 6 0.0093 1.2e+02 4.4 0.0 29 57 313 341 304 345 0.88

6 6 0.0081 1e+02 4.6 0.0 29 57 386 414 377 420 0.87

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	0.012	1.5e+02	4.0	0.0	29	57	40	68	34	72	0.89
2	6	0.0093	1.2e+02	4.4	0.0	29	57	113	141	104	145	0.88
3	6	0.36	4.4e+03	-0.8	0.1	75	116	184	224	174	236	0.77
4	6	0.013	1.6e+02	3.9	0.0	29	57	240	268	235	271	0.89
5	6	0.0093	1.2e+02	4.4	0.0	29	57	313	341	304	345	0.88
6	6	0.0081	1e+02	4.6	0.0	29	57	386	414	377	420	0.87

Sequence Information

Coding Sequence: atgaggttggtgggaagtatatgtttttcaaaagagacaattcaaagacgggaaataaaacgttcggaattattgaattgcgtaacttccagacgggaagagatatcgccttgcaggaaaagttcaaagacgggaaataaaacgttcggaataattgaattgcgtaacttccagacgggaagagctatcgacttgcagttagtgccaatcgcattagaatcatggggttggttggaagtatatgtttttcgggaaaaaattcaaagacgggaaataaaacgtttggaattattgaattgcgtaacttccagacgggaagagctatcgacttgcaggaaaagttcaaagacgggaaataaaacgttcggaataattgaattgcgtaacttccagacgggaagagctatcgacttgcagttagtgccaatcgcatcagtatcattgggttggttggaagtatatgttgttcgggaaaaaattcaaagacgggaaataaaacgtttggaattattgaattgcgtaacttccagacgggaagagctatcgacttgcaacgggaagagctatcgacttgcagttaaagccaatcgcatcagaatcatgaggttggtgggaagtatatgtttttcaaaagagacaattcaaagacgggaaataaaacgttcggaattattgaattgcgtaacttccagacgggaagagatatcgccttgcaggaaaagttcaaagacgggaaataaaacgttcggaataattgaattgcgtaacttccagacgggaagagctatcgacttgcagttagtgccaatcgcattagaatcatggggttggttggaagtatatgtttttcgggaaaaaattcaaagacgggaaataaaacgtttggaattattgaattgcgtaacttccagacgggaagagctatcgacttgcaggaaaagttcaaagacgggaaataaaacgttcggaataattgaattgcgtaacttccagacgggaagagctatcgacttgcagttagtgccaatcgcatcagtatcattgggttggttggaagtatatgttgttcgggaaaaaattcaaagacgggaaataaaacgtttggaattattgaattgcgtaacttccagacgggaagagctatcgacttgcaggaaaagttcaaagacgggaaataaaacgttcggaataattgaattgcgtaacttccagacgggaagagctatcgacttgcagttagtgccaatcgcatcagaatcatggggttggttggaagtatatgtttttcttaggaaaaagtccaaagacgggaaataa
Protein Sequence: MRLVGSICFSKETIQRREIKRSELLNCVTSRREEISPCRKSSKTGNKTFGIIELRNFQTGRAIDLQLVPIALESWGWLEVYVFREKIQRREIKRLELLNCVTSRREELSTCRKSSKTGNKTFGIIELRNFQTGRAIDLQLVPIASVSLGWLEVYVVREKIQRREIKRLELLNCVTSRREELSTCNGKSYRLAVKANRIRIMRLVGSICFSKETIQRREIKRSELLNCVTSRREEISPCRKSSKTGNKTFGIIELRNFQTGRAIDLQLVPIALESWGWLEVYVFREKIQRREIKRLELLNCVTSRREELSTCRKSSKTGNKTFGIIELRNFQTGRAIDLQLVPIASVSLGWLEVYVVREKIQRREIKRLELLNCVTSRREELSTCRKSSKTGNKTFGIIELRNFQTGRAIDLQLVPIASESWGWLEVYVFLRKKSKDGK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -