Basic Information

Transcription Factor Domain

TF Family: zf-C2HC
Domain: zf-C2HC domain
PFAM: PF01530
TF Group: Zinc-Coordinating Group
Description: This is a DNA binding zinc finger domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 0.0046 49 5.9 0.0 21 29 29 37 27 37 0.89

2 4 1.8e-19 1.9e-15 58.4 8.3 1 29 50 78 50 78 0.98

3 4 9.5e-18 1e-13 52.8 5.2 1 29 95 123 95 123 0.97

4 4 7.8e-20 8.2e-16 59.5 5.1 1 29 156 184 156 184 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	0.0046	49	5.9	0.0	21	29	29	37	27	37	0.89
2	4	1.8e-19	1.9e-15	58.4	8.3	1	29	50	78	50	78	0.98
3	4	9.5e-18	1e-13	52.8	5.2	1	29	95	123	95	123	0.97
4	4	7.8e-20	8.2e-16	59.5	5.1	1	29	156	184	156	184	0.97

Coding Sequence: ATGTTTGCGTTTGCGAGATGTGCGTTCGCTCAAGCTCTCGAAGACACTCAGAAGCCATTACTActaagtttttctttaaaatttttcagtctcTCCGGGTGCCCTCGGTCCGACAGATCTCAGATCCAGGCGCACTCCCAGGAGCTCAAGTGCCCGACCCCGGGCTGCGACGGATCGGGCCACGTGACCGGTAACTACTCCTCGCACAGGAGCCTCTCGGGCTGCCCCAGGGCCAACAAGCCCAAGAGCAAGCCTCGAGACGGCCAGGACTCCGAGCCCCTCAGATGTCCCATACCCGGCTGCGATGGCTCTGGTCATGCCACCGGCAAGTTCCTCTCGCATCGCAGTGCATCTGGTTGTCCTATCGCAAATCGAAATAAGATGCGAGTCCTGGAGTCCGGGGGCACGGTGGAGCAGCACAAAGCGGCCGTGGCCGCGGCCACTGCCATGAAGTTCGAGGGTGTGAACTGTCCGACGCCAGGATGCGACGGTATCGGGCACATAAACGGCTCCTTCTCCACGCACAGATCGCTTTCGGGGTGCCCGATCGCCGGACACGCGGTCAAGAAGCCCAAGTTCGAGGACATGTCCTCCATGTACAGCAAGGGCATCACAGGTGAGACTTAA
Protein Sequence: MFAFARCAFAQALEDTQKPLLLSFSLKFFSLSGCPRSDRSQIQAHSQELKCPTPGCDGSGHVTGNYSSHRSLSGCPRANKPKSKPRDGQDSEPLRCPIPGCDGSGHATGKFLSHRSASGCPIANRNKMRVLESGGTVEQHKAAVAAATAMKFEGVNCPTPGCDGIGHINGSFSTHRSLSGCPIAGHAVKKPKFEDMSSMYSKGITGET

Sequence clustering based on sequence similarity using MMseqs2