Basic Information

Transcription Factor Domain

TF Family: zf-C2HC
Domain: zf-C2HC domain
PFAM: PF01530
TF Group: Zinc-Coordinating Group
Description: This is a DNA binding zinc finger domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 0.0071 37 5.0 0.1 22 29 2 9 1 9 0.89

2 4 1.1e-19 6e-16 58.7 8.3 1 29 22 50 22 50 0.98

3 4 6.2e-18 3.3e-14 53.2 5.2 1 29 67 95 67 95 0.97

4 4 5.1e-20 2.7e-16 59.8 5.1 1 29 128 156 128 156 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	0.0071	37	5.0	0.1	22	29	2	9	1	9	0.89
2	4	1.1e-19	6e-16	58.7	8.3	1	29	22	50	22	50	0.98
3	4	6.2e-18	3.3e-14	53.2	5.2	1	29	67	95	67	95	0.97
4	4	5.1e-20	2.7e-16	59.8	5.1	1	29	128	156	128	156	0.97

Coding Sequence: ATGAGTCTGTCGGGCTGCCCGCGAGCCGATCGCTCGCAGATCCAGGCGCATTCGCAGGAGCTCAAGTGTCCGACGCCAGGCTGCGATGGTTCGGGCCACGTCACCGGCAACTACTCGTCCCATCGGAGCCTCTCCGGATGCCCCCGAGCCAACAAGCCCAAGAGCAAGCCTCGTGACGGCCAGGATTCCGAGCCCCTCAGATGTCCCATTCCCGGCTGCGACGGATCGGGACACGCCACCGGCAAGTTCCTCTCGCACCGCAGCGCATCGGGCTGCCCCATCGCGAATCGCAACAAGATGAGGGTCCTCGAGTCCGGCGGTACGGTCGAGCAGCACAAAGCCGTGGTCGCAGCAGCCACTGCCATGAAGTTCGAGGGCGTCAATTGCCCGACGCCCGGCTGCGACGGCATCGGCCACATCAACGGCTCCTTCTCCACGCACAGATCGCTCTCGGGCTGTCCGATTGCCGGCCACGCGGTCAAGAAGCCCAAATTCGAGGACATGTCTGCCATGTACAGCAAAGGCATTACAG
Protein Sequence: MSLSGCPRADRSQIQAHSQELKCPTPGCDGSGHVTGNYSSHRSLSGCPRANKPKSKPRDGQDSEPLRCPIPGCDGSGHATGKFLSHRSASGCPIANRNKMRVLESGGTVEQHKAVVAAATAMKFEGVNCPTPGCDGIGHINGSFSTHRSLSGCPIAGHAVKKPKFEDMSAMYSKGIT

Sequence clustering based on sequence similarity using MMseqs2