Efor001232.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Encarsia formosa
Gene Symbol
tfip11
Assembly
GCA_030522645.1
Location
JAPYYY010000178.1:102421-105957[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.9e-92 6e-88 296.8 19.5 1 275 397 663 397 663 0.98
2 2 0.14 4.6e+03 -1.3 0.0 244 269 677 702 669 720 0.62

Sequence Information

Coding Sequence
atgtcTGACGAAGAAATGGAATCATTCGAAATCACGGATTATGATTTGGATAATGAATTTAACATTCATCGTCCTCGACgaaaaatgtctaaaaaacAGCAAATGCtaggcATATGGGCTAGTGACAGCGATGAAGAAGAAGCTAGACCATCATTCAGTCGAAAACCCAAggtgaaaaaaaactattcagcTCCTGTTAGTTTTGTAGCAGGAGGAATTCAACAAGCAGGACAAcccaaagaaaagaaaaaaactgaagaCAGTGGAGATGATGAtgaggatgatgatgatggaaaAGAcgacaaatcttttttaaaaaatagttccagTGAGTCAGAAACTGAGCTGCCAAGAAGTTTTGCCTCCAAGTCTTcaaagaattttgattttggtcACCAAGATATTGCtggattgagaaaaaaaagaactcctATAAATCCAGAACTCATGAAAACTGGTCTTGGCAATTGGGAAAAACACACAAAAGGCATAGGTGCCAAATTACTTCTTCAAATGGGTTATGAACCTGGTAAAGGTCTGGGAAAATCATTACAAGGTATCAGTGCACCAGTTGAAGCTCGTTTACGAAAGGGAAGAGGAGCTATTGGTGCTTATGGTCCtgaaaaaactccaaaaatagCAGAGACTAAATTAAGTGTTGAAGATGCtgataagaaaaaatcaagtaaaagtAAAACCTCGCACTGGAGAAAAACAGAAAAgggtgaaaaatcaaaatcaaactaTTCTTATCGCAGTGTGGAAGAAGTAATTGAAGAAggaaaattaaaaccaaaaaagagTGCACCAAGTATTAATTCAGAAATTGCAAAATGTAAATTAATAGATATGACAACTCCAGAGCAGAAAACTTTCAGTGGTTACCATGCATTAGGAAAACGTCATCAAGTACCAGACGAGACTCCAATACCAACtgacaaaaaaagtaaagtaaattttgcctTACCAGAATTGCAACATAACTTGGATATGCTTGTTGATATGTGCGAAcaaaatattatacaaaatgACAAAAGAACAAAGTACCTTAGTGATAGGATTGTTTCGCTAGAAGCAGAAAAAGAAACACTGTCCAAAGTTGTGGATCAACATGCACGTTTAATTGGAACATTAGAAAACGTTTTGGCAATGATTAATAGATTATCAGATAGAAGTAATGATATGACTCTCAAAGAAATTGCagaagcatttaaaatattGCAAGAAAGAAATTATGAGGAGTACAAAGCGTATCACTTAGGAGATTTGGCATGTAGTTTTATAATCCCTAAGTTCAAAGAGTACTTAGCAAATTGGAATCCATTTCTACAACCGCAGTTACCAGTATCTTTATTCAAAGAATGGAAAGATATTTTAGAGTATGGTAAAATTGATTTGTTATCCAGGTCTATGAGTCCATATGATCAACTTATTTGGAATGTTTGGATGCCATTTGTTCGAAATGCTATTCAaacttGGGCGTGCAGACAACCAGAAAATCTAATTGATTTACTTGAACTGTGGTTACCATTGCTTCCTCCTTggattttagaaaatattttagaaattattcTTCCTAAACTAACACTGGAGGTCGAAGACTGGAATCCATTGACAGACACTATACCAATTCACACATGGATCCATCCATGGCTACCTTTAATGAaAAATCGAATGGACacttcaatttattcaattataagGAGAAAACTTGGTTCTGCTCTCCGAGCGTGGCATCCGTCAGATCGTTCAGCCAGGCTAATGTTACAACCATGGGTGCAAGTGTTTGCAAGAAATGATATGAATGCTTTTTTGAAGAACAACATCTTACCAAAATTAGGGGAAGCGCTTTCTGAATTGATTATAAATCCCCACCAGCAGCATTTAGATCATTGGAACTGGGTTTATGATTGGAAAGACCTGATTCCGATTCCTGCGATGGCGGCTCTTTTGGACCAGTATTTCTTCCCCAAGTGGTTGCAAGTTCTAGGACTTTGGTTAAATCATTCCCCTAATTATGAACAAGTTACAAATTGGTACACTGGTTGGAAGGGaatgataaatgaaaaacttcttgCGGAACCAAATGTTAAagAACACTTTGACAGAGCTTTAGAAATGATGAACAGAGCAGTTTCAGTTTCTCAAGGACTTCAGCCCGGTTCAGTAGAACAGGTATCTTATTTGACAAATCTCGAACGAAGTCAGGCACAAATGGCCAAAGTCCCTCAATTCTCGCAACCAAGACTAGAAAGATTAGCGGAAGCGGTTAGAACGGCATCTCAAGCGCCGCGAGATTTCAAAGACTTGGTACAGAAGAGGTGCGAAGACAGAGGAATACTGTTCATGCCACTCGCGAATAGATACAAAGACGGAAAACAAATATACAAAGTTGGCAATGTTCAGGCGTACATTGACACCGACATGATATTCGTTTGTCACAGCGGATCCAATTGGTTTCCAACAAATCTAAACACACTCTTAGACACGGCTGAAATTAGTTGA
Protein Sequence
MSDEEMESFEITDYDLDNEFNIHRPRRKMSKKQQMLGIWASDSDEEEARPSFSRKPKVKKNYSAPVSFVAGGIQQAGQPKEKKKTEDSGDDDEDDDDGKDDKSFLKNSSSESETELPRSFASKSSKNFDFGHQDIAGLRKKRTPINPELMKTGLGNWEKHTKGIGAKLLLQMGYEPGKGLGKSLQGISAPVEARLRKGRGAIGAYGPEKTPKIAETKLSVEDADKKKSSKSKTSHWRKTEKGEKSKSNYSYRSVEEVIEEGKLKPKKSAPSINSEIAKCKLIDMTTPEQKTFSGYHALGKRHQVPDETPIPTDKKSKVNFALPELQHNLDMLVDMCEQNIIQNDKRTKYLSDRIVSLEAEKETLSKVVDQHARLIGTLENVLAMINRLSDRSNDMTLKEIAEAFKILQERNYEEYKAYHLGDLACSFIIPKFKEYLANWNPFLQPQLPVSLFKEWKDILEYGKIDLLSRSMSPYDQLIWNVWMPFVRNAIQTWACRQPENLIDLLELWLPLLPPWILENILEIILPKLTLEVEDWNPLTDTIPIHTWIHPWLPLMKNRMDTSIYSIIRRKLGSALRAWHPSDRSARLMLQPWVQVFARNDMNAFLKNNILPKLGEALSELIINPHQQHLDHWNWVYDWKDLIPIPAMAALLDQYFFPKWLQVLGLWLNHSPNYEQVTNWYTGWKGMINEKLLAEPNVKEHFDRALEMMNRAVSVSQGLQPGSVEQVSYLTNLERSQAQMAKVPQFSQPRLERLAEAVRTASQAPRDFKDLVQKRCEDRGILFMPLANRYKDGKQIYKVGNVQAYIDTDMIFVCHSGSNWFPTNLNTLLDTAEIS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-