Eonu030373.1
Basic Information
- Insect
- Empoasca onukii
- Gene Symbol
- -
- Assembly
- GCA_018831715.1
- Location
- CM032064.1:12939832-12941736[-]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 0.0046 1.8 10.0 0.0 20 44 46 70 26 102 0.75 2 6 0.0051 2 9.8 0.0 20 44 120 144 104 171 0.71 3 6 0.045 18 6.8 0.0 21 44 189 212 174 224 0.79 4 6 0.01 4.1 8.8 0.0 24 44 229 249 221 283 0.74 5 6 0.0085 3.3 9.2 0.0 18 44 292 323 276 328 0.79 6 6 0.013 5.3 8.5 0.0 22 44 348 370 341 381 0.83
Sequence Information
- Coding Sequence
- ATGGCAGACTCCAGCTCCTGTCTGAACCTGAAGTACCCTCCAGTACTTCTAGATCCTGAATACATTCAGTTCCTCCTGGACCCGGCCCTGCAGTTTAGCTGTTACTTTGTAGTAGGAAATGCACAACTGGCTCCTGTGGAGAAGATAGGAGTGATCAAGAAGATGCTGGCAGCTCACAGTGAAGTGTTCAGGACACAACTCCTGAGCCGGCAGTGGGAGCCTGAAGTACCCTCCACCGGCAGTGGGAGCCTGAAGTACCCTCCAGTACTTCTAGATCCTGAATACATTCAGTTCCTCCTGGACCCGGCCCTGCAGTTCAGCTGTTACTTTGTAGTGGGAAATGCACAACTGGCTCCTGTGGAGAAGATAGGAGTGATCAAGAAGATGCTGGCAGCTCACAGTGAAGTGTTCAGGACACAACTCCTGAGCCGGAAGTGGGAGCCTGAATGGGGCCTGAAGTACCCTCCAGTACTTCTAGATCCTGAATACATTCAGTTCCTCCTGGACCCGGCCCTGCAGTTAAGCTGTTACTTTGTAGTGGGAAATGCACAACTGGCTCCTGTGGAGAAGATAGGAGTGATCAAGAAGATGATGGCAGCTCACAGTGAAGTGTTCAGGACACAACTCCTGAGCCGGCAGTGGGAGCCTGAATGGAAATGCACAACTGGCTCCTGTGGAGAAGATAGAGTGATCAAGAAGATGCTGGCAGCTCACAGTGAAGTGTTCAGGACACAACTCCTGAGCCGGCAGTGGGAGCCTGAAGTACCCTCCACCGGAAGTGGGAGCCTGAAGTACCCTCCAGTACTTCTAGATCCTGAATACATTCAGTTCCTCCTGGACCTGGCCCTGCAGTTCAGCTGTTACTTTGTAGTGGGAAATGCACAACTGGCTCCTGTGGAGAAGATAGGAGTGATCAAGAAGATGCTGGCAGCTCACAGTGAAGTGTTCAGGACACAACTCCTGAGCCGGCATTCCTCCTGGACCTGGCCCTGCAGTTCAGCTGTTACTTGTAGTGGAAATGCACAACTGGCTCCTGTGGAGAAGATAGGAGTGATCAAGAAGATGCTGGCAGCTCACAGTGAAGTGTTCAGGACACAACTCCTGAGCCGGAAGTGGGAGCCTGAAGTACCCTCCAGTACTTCTAGATCCTGA
- Protein Sequence
- MADSSSCLNLKYPPVLLDPEYIQFLLDPALQFSCYFVVGNAQLAPVEKIGVIKKMLAAHSEVFRTQLLSRQWEPEVPSTGSGSLKYPPVLLDPEYIQFLLDPALQFSCYFVVGNAQLAPVEKIGVIKKMLAAHSEVFRTQLLSRKWEPEWGLKYPPVLLDPEYIQFLLDPALQLSCYFVVGNAQLAPVEKIGVIKKMMAAHSEVFRTQLLSRQWEPEWKCTTGSCGEDRVIKKMLAAHSEVFRTQLLSRQWEPEVPSTGSGSLKYPPVLLDPEYIQFLLDLALQFSCYFVVGNAQLAPVEKIGVIKKMLAAHSEVFRTQLLSRHSSWTWPCSSAVTCSGNAQLAPVEKIGVIKKMLAAHSEVFRTQLLSRKWEPEVPSSTSRS*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -