Basic Information

Insect: Empoasca onukii
Gene Symbol: LRRFIP2
Assembly: GCA_018831715.1
Location: CM032062.1:1146689-1161611[+]

Transcription Factor Domain

TF Family: LRRFIP
Domain: LRRFIP domain
PFAM: PF09738
TF Group: Unclassified Structure
Description: LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 2.9e-16 1.3e-11 45.6 10.2 1 43 310 351 310 358 0.87

2 3 2e-40 8.9e-36 125.0 12.7 139 300 355 515 349 515 0.88

3 3 0.0015 67 3.9 6.7 120 173 513 566 512 576 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	2.9e-16	1.3e-11	45.6	10.2	1	43	310	351	310	358	0.87
2	3	2e-40	8.9e-36	125.0	12.7	139	300	355	515	349	515	0.88
3	3	0.0015	67	3.9	6.7	120	173	513	566	512	576	0.95

Sequence Information

Coding Sequence: ATGGCTGAGAGGTCCCGTGATGTGTGTGACCCAGCTGAGAGCATAGTGTACACCATGGCTGAGAGGTCCCGTGATATAGACGATATGGCAGACGAGGACAATGGTGGCAGTGAGACGGAGATGGGCAACCAGCAAGCAGCCggcaagaagaagaagaagcctcacaacaacaacaacaacaacggaCATGAAGAGAGAGTGGAGGAGGAGTACAAGTACGTGTCGATAGTAGATGTGAATCCGGTGAGTGAGGAGGCCATGTGTCACCGGATCCAGGTGAATTCACCACAGAACAGTGATGTGATCAAGTGTAGTGTGCTCGTAGGAGAGAATGGACAGCAGGGTTCACGAGTCAGCAGGGTTTCCGTCAACGGCAGTTTCAATGTGCCGGACGGTTCGTCTTCTCTTGTCGAACAAGACGGTGTAAATGTGTCGAGCGGTTTTGTACTCAAAGATTTGCCGAATGGATCGCTGAACGGTAGTTCTTCTCCAGTTTTGATCCCGACTGTTACCATCTCTACCGAAGAGGCGGAGAATCATTCACCGGTTAACTCTTCAGGAGGTGAATTCTCCACCCCAGACAGACCGGAGTCACTCCTGATCTCACCCCACAACGGATTTGTAACACCCGACAGTAGGCTTTCTCCAGTGGAACCGATGTCCAACGGGCATCAACCTATGGAAGAGGACCTGTGCTCTGAGGAGGAACAGGAGACGCTGGAAGAGCGGGTGGCTCGGGCTGTGAGACAGACCCTGGCGGGTAAGGATGCCGGTGGGATGGACCTGGGGGAGGACTTCCAGGAGGAGGTCGAGAGAGTGGTCAGGGAGAAGTTGAAAAGACAGAGGAGTGGCAGCAGTGACTACTGGAACCACGATGACACAGATGATCACTGCATCGTGGATTTCTTGGACAAGATCAATGATCACGCGGAGGCACGGCTGGCGGCTAAGAGACAGGCGCGGGCGGAGGCCAGAGAGATCAGGATGCGGGAGCTGGAGCGAATGCAGAGAGAGAGTGAAGACGGAGACAAGGTCTACGACATCTACTCTACTCCAGGTACAAGAGTTCACAAGGAGACTTGTAGACAGCTGGAACAGATGAAGAGACACAGGACGAAACTGCAAGAGGACCTGGAGATCACCCGCTCCCAGCTGTCTGAACTGCATCAGCTGATACAGGAGAAGGGGTTGGTGGTAGTGGAAGGCGACTGCTCCTCGTCGGACGAGGAGAGTGAAGGATCACAGCCGAGGTCGCAAGCGCAGAAGCAGCCGAAGAAAGCTCTCGTCTCGGCCGAGGTGGCTGACGTCATACAGCAAGGCTCCGGCTCTCTCGACGTGCGGTTGAAGAGGTTTGTGGAGGAGCGGAATGAGTTGCTGGATGAGTTGCGCAGGGTGAAGATGGAACTGGAGGAGGAGAGAGCGAGGTCGCGCGGCAGACACGCCAACGGACCTACCGACGACTCAGAGGACATTCAGAGAGAAGCAAACAAGATGCTAGGAGACTACAAGTTCAAACTGCAGAAGGCTGAACAAGACGTAAACACCTTGCAAGCCAATgttgcAAGATTAGAGAGTCAAGTTGTCCGGTACAAGTCAGCGGCGGAAACATCCGAGAAATCAGAAGACGAATTGAAATTAGAAAAGAGAAAATTACAGAGAGAGTTGAGAGAAACGCAAGCCCGACTGGAAGAGCTGGAGACATCCAACTCCCATCTCCAGCGGAGACTGGACAAGCTGAAGAATGCCAAGTCTGCCTTGCTCAAGGACTTGTAG
Protein Sequence: MAERSRDVCDPAESIVYTMAERSRDIDDMADEDNGGSETEMGNQQAAGKKKKKPHNNNNNNGHEERVEEEYKYVSIVDVNPVSEEAMCHRIQVNSPQNSDVIKCSVLVGENGQQGSRVSRVSVNGSFNVPDGSSSLVEQDGVNVSSGFVLKDLPNGSLNGSSSPVLIPTVTISTEEAENHSPVNSSGGEFSTPDRPESLLISPHNGFVTPDSRLSPVEPMSNGHQPMEEDLCSEEEQETLEERVARAVRQTLAGKDAGGMDLGEDFQEEVERVVREKLKRQRSGSSDYWNHDDTDDHCIVDFLDKINDHAEARLAAKRQARAEAREIRMRELERMQRESEDGDKVYDIYSTPGTRVHKETCRQLEQMKRHRTKLQEDLEITRSQLSELHQLIQEKGLVVVEGDCSSSDEESEGSQPRSQAQKQPKKALVSAEVADVIQQGSGSLDVRLKRFVEERNELLDELRRVKMELEEERARSRGRHANGPTDDSEDIQREANKMLGDYKFKLQKAEQDVNTLQANVARLESQVVRYKSAAETSEKSEDELKLEKRKLQRELRETQARLEELETSNSHLQRRLDKLKNAKSALLKDL*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -