Eonu026293.1
Basic Information
- Insect
- Empoasca onukii
- Gene Symbol
- tfip11
- Assembly
- GCA_018831715.1
- Location
- CM032063.1:10536974-10548595[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-73 2.7e-69 235.1 19.0 11 275 414 654 407 654 0.96 2 2 0.55 1.2e+04 -3.2 0.0 245 261 669 685 660 697 0.52
Sequence Information
- Coding Sequence
- ATGTCTGACGAAGAAGTAGAATCATTTGATATTACCGATGAAGATCTCAATAGAGCATTCAATCCTGGTGCAAGATCTTTTAGAAAGGGATTGTCTAAAAATCAACAGATTTATGGAATGTGGGCTGATGATAGCGGCGACGAAGGGCCAAGTAATCGCTCTGGGTTTGTAAGTAAATCTCGTAAACCCAAAAACTATAGTGCACCAATAGGTTTTGTTGCTGGAGGTGTACAACAAGCAGGAAAGAAAAAAGAGAAAGAAGAGATTAAAGATGCAAAAGATGAAGAAGAAGACGATGATGACAATGTACGTCGAAGAAGGCAAGACTCGAGTGAGTCAAGtgaagaagaTGAACCAAGGgcaggttttaaaaatttgtccaTGAGTCAAATTGATGGCGAAATAGCTGGTCTGAGGAAAAAGAAGTCACAATTCAACCCTGCACTTGCAAACAAAGGGGTTGGGAAATGGGAACAACACACTAAAGGAATTGGAGCCAAGCTACTTTTACAGATGGGTTATCAACCTGGTAAAGGTTTAGGCAAAGATCTCCAAGGTATTCAAGCACCCATTGAAGCTAATCTCAGGAAAGGAAGAGGTGCAATTGGAGCATATGGTCCAGAAAAGGGGCAAAAGATCGCTGATTTGGAAActgaaaagaagaaaaaaccAAAAGAACTTGaaaaaacagacaaagtatCTCAGTGGAGGAAAGAAGATGGTCTAAGCAGACACCAAACCGTCCGATATGTTTACAAAAGTATTGAAGACGTTTTGGAGGAGAGTAAACAGCCTGGGAAAAAGAAGAAGCGAGAGTTCAATGAGCTGAGCAAAGTGAAGGTGATTGACATGACGGGACCGGAACAGAGAGTCCTCTCCGTATCACGCACTCCAGCGTGCAGAAGCCCTCCGAGCAGTGGGAGATCCGCAAGGACAAGAAGTTCAACAACTTTGAACTGCCTGAACTCCAACACAACCTCAATCCTTCTGGTCGACATGTGCGAAGAGGCCATAGTTGCAAATGATCGCAACCTGCAGTACGCAGAAAACCGATGTGTTGCTTTGGAAGCAGAGATCGAGACTCTGAACAAGCTGGAGAAACAGGAGGCGGAAGTAATCGAGGGGCTGGACAAGGTGATGGAGATTGTACAGAGACTGGTGACAGGCTCGGAGCACAACACTCTCACGCTGCAGGAGGCCTCCCTAGCCTTTCAAGGAGCTCAGGTTAAAATGCTGTGTCTGCAGGAAAAGTACTACTTGGAGTACTGCATGTACGAGGTGTACTCTCTGGCTGACACGGTGGTACGGCCGCTGTTCAACGACTATCTGTCTGCGTGGTCGCCCCTGCAGGATCCTGCGCGACCAGTCAGCATGTTCCAGCAATGGCGCATCATCCTAGAGCAGGACCAAGCGCACACGCTATCCACCTCCGCGCAGGACCCGTACCACAAGCTGCTGTGGAACACCTGGATGCCTTGTGTGCGCATCGCTGTCAGTGCGTGGCAGTGTAGGAAGTACGAGCCTATGATAGAGTTCATGGAGACGTGGGTGCCTCTACTGCCGTCCTGGATCCTAGAGAACATACTGCAGAGTCTGATACTGCCCAGGCTGACTCAGGAGGTGGAGGAATGGAACCCTCTCACAGACACCATCCCTATACACACCTGGACACAGCCTTGGCTCCCCTATCTTGGCAAGTACCTGTCTACGACGATATTCCCCATGATCCGGCACAAGCTGAGTGCGGCGCTGCTTTCACCAAGGGCGAGATGGACGCTGTTCCTTATCAACAACATCGTGCCTAAGCTGCACCTTACCCTGCAGGAGTTCGTTATCAACCCCCACCAACAACATCTAGATGGATGGAACTGGGTGATGGAGTGGGTAGAGTTGCTACCAACTCACGTCATGATGGCGTCTCTACTGGACAAGAGTTTCTTCCCCAAGTGGCTCCAAGTGCTCACCCTCTGGCTGAACCTCAACCCCAACTACGACCAGGTCACCAACTGGTACTCGGGCTGGAAGAGCGTCATGCCGGAATCCCTGCTAAATGAGCCTACCGTCAAAGAACACCTGAGGTCAGCACTGGAGTTGATGAACAGGTCGGTGGGAGGGACTCCAGCCCCAGTCCCGAGTCAGAGTGAGACTGCCCAGGCTCAAGCCAGATATCAGGGTCTGGCAGAGTGTATCAGGACAGCTCAGCAGGTACCGGAAGGGTTCAAGGAGCTGGTACAGAAGCGGTGTGAGGAGCGAGGTATCGTGTGGCTGCCACTGGCTAACCGCTATCGAGAAGCCAAGCAGATCTACAAGTGCGGGAGTGTGCAGGTGTACATCGACCGCAACGTGCTGTTTGTCTGCAACTCCGGCCAGTGGGAACCCACCTCACTCAATGCTCTCCTGGACATGGCTGGGTAG
- Protein Sequence
- MSDEEVESFDITDEDLNRAFNPGARSFRKGLSKNQQIYGMWADDSGDEGPSNRSGFVSKSRKPKNYSAPIGFVAGGVQQAGKKKEKEEIKDAKDEEEDDDDNVRRRRQDSSESSEEDEPRAGFKNLSMSQIDGEIAGLRKKKSQFNPALANKGVGKWEQHTKGIGAKLLLQMGYQPGKGLGKDLQGIQAPIEANLRKGRGAIGAYGPEKGQKIADLETEKKKKPKELEKTDKVSQWRKEDGLSRHQTVRYVYKSIEDVLEESKQPGKKKKREFNELSKVKVIDMTGPEQRVLSVSRTPACRSPPSSGRSARTRSSTTLNCLNSNTTSILLVDMCEEAIVANDRNLQYAENRCVALEAEIETLNKLEKQEAEVIEGLDKVMEIVQRLVTGSEHNTLTLQEASLAFQGAQVKMLCLQEKYYLEYCMYEVYSLADTVVRPLFNDYLSAWSPLQDPARPVSMFQQWRIILEQDQAHTLSTSAQDPYHKLLWNTWMPCVRIAVSAWQCRKYEPMIEFMETWVPLLPSWILENILQSLILPRLTQEVEEWNPLTDTIPIHTWTQPWLPYLGKYLSTTIFPMIRHKLSAALLSPRARWTLFLINNIVPKLHLTLQEFVINPHQQHLDGWNWVMEWVELLPTHVMMASLLDKSFFPKWLQVLTLWLNLNPNYDQVTNWYSGWKSVMPESLLNEPTVKEHLRSALELMNRSVGGTPAPVPSQSETAQAQARYQGLAECIRTAQQVPEGFKELVQKRCEERGIVWLPLANRYREAKQIYKCGSVQVYIDRNVLFVCNSGQWEPTSLNALLDMAG*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -