Este001329.1
Basic Information
- Insect
- Empis stercorea
- Gene Symbol
- nfxl1
- Assembly
- GCA_949752835.1
- Location
- OX457085.1:16643743-16647044[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 2 3.2e+04 -7.9 5.6 15 19 178 182 177 182 0.81 2 18 0.13 2.1e+03 -0.3 0.4 4 10 213 219 212 219 0.95 3 18 3.1e-08 0.00049 20.9 17.0 1 19 227 244 227 244 0.99 4 18 3.2e-09 5.1e-05 24.0 14.7 1 19 280 299 280 299 0.97 5 18 1.4 2.2e+04 -3.6 1.8 6 10 324 328 323 328 0.89 6 18 8e-05 1.3 9.9 12.9 1 19 334 352 334 352 0.97 7 18 1.1 1.8e+04 -3.3 0.5 1 9 377 384 377 384 0.61 8 18 2.8e-08 0.00044 21.0 7.8 1 18 387 404 387 405 0.96 9 18 0.085 1.4e+03 0.3 1.2 1 10 414 423 414 423 0.93 10 18 2 3.2e+04 -5.0 2.3 5 10 428 433 428 433 0.91 11 18 3.3e-05 0.53 11.2 16.6 1 18 439 456 439 457 0.92 12 18 3.5e-08 0.00055 20.7 11.7 3 18 468 483 466 484 0.91 13 18 0.62 9.8e+03 -2.5 0.9 5 10 512 517 512 517 0.94 14 18 0.49 7.8e+03 -2.2 10.2 9 18 530 539 521 540 0.91 15 18 0.01 1.7e+02 3.2 5.2 3 12 551 560 543 560 0.84 16 18 8.3e-07 0.013 16.3 6.0 1 12 629 640 629 640 0.97 17 18 0.075 1.2e+03 0.4 12.3 3 18 669 684 668 685 0.94 18 18 1.4e-06 0.022 15.6 11.0 1 18 731 750 731 751 0.89
Sequence Information
- Coding Sequence
- atgcgtaaacagaaacaaaaatccaaaaataataCCGGTGCTTGGAATATTGGAAATAATACAACCTTGACCTCGTCATCGTCTGCTGCTGCACCAATTGCAAAAAATAATGCacctacattaaaaaaatttgaagaaattcgtactaaaaatgaggaaaaagctaaatctattatatataaagattATGAATCTAGTTCTGATGAAGAAGATTTAAATGAAAAGGAAATTCTAGAtaaattatttcgaaattattCGGGGAACAACCAACAGCtttcaaaaattcaactatTTTTAGAGGATTTCTTACAATCAGGCTCTGCAATTTGTTTAATATGTATCGGAACAGTTAAACGTACCGATTCGATTTGGTCATGCAaaaattgttattgtttttttcattttaattgtttaaaacgTTGGTCCAATGATAGTATagcattacaaaaattaaatgctGATCAAAATCAaagttattataataatcaaggtgaatatatacaaaaaaaaattaaacaaattcgtTGGTGTTGTCCAAAATGTCGTAAAGATTATTCACCAGATGATATACCAAAACAATATGAATGTTTTTGTGGTAAAGAAATAAATCCACAAAATCATCCATGGTTAATACCACATTCATGTGGTgaaatatgtgaaaaatatttagaaccAGAATGTGGTCATAAATGTTTATTACTTTGTCATCCTGGACCATGTCCACCATGTCcacaaaatataacaatttcatGTAAATGTGAAAAGTCAATACCGAAAACTATTAGATGTTTTCAAAAATCATGGAATTGTGAATTAAAAtgTCAGAAAGTGTTAATTTGTGGAATACATAAATGTGAACAAATATGCCATCCAACAGGCAATTGTCCACCATGTACAAAACAAAGTAAACAAAAATGTCAATGTGGTAATGAATCAATTGAAAGAAATTGTTCTCAATTAATATGGCAGTGTAAAAAAgtatgtAACAAATCGTTATCTTGTAGtttacataaatgtaaaaaagttTGCCATTCCAATGGTTGTGGGAATTGCCCATTAGGTTTACCAAGATCATGTCCTTgtggaaaaaatAAATCAATTGCTCCTTGTAGTGAGATTATTGATACTTGTGGAGATACCTGCCAAAAAGTTTTAGCCTGTGGATTACATTATTGTGCTCAGAGGTGTCATAAAGGAGATTGTAGTTTGTGTTTagcaattgttgaaaaaaaatgtcGATGCGGTTTGCACAAAAAAGAACAGCCatgttcaaaaatatttacatgtgaaacaaaatgtaaattaatgaGAGAATGTCAGAAACATTCTTGTAGTAAAAAGTGCTGTGATGGTCAATGTCCACCATGTGATaaagtttgtaataaaactctttCTTGCAAAAAACACAAATGTAAATCAATTTGTCATGATGGACCATGTTATCCGTGTGATTTAAAATCATCAGTGAAATGTCGATGCGGTAATACATCAGTAACAGTTCCTTGTGGACGggaaaagaaaacaaaaacacCAAAATGTATACAATTATGCCGAATACCATCAAAATGTCATCATGATAATCCTCATAAATGTCATATGAATGATTGTCCACCATGTGTACAAAAATGCGGTTTACTAACATCATTATGTGCTCATCCATGCGAAGCCAAATGTCATGATGTAGTTAAGGTAGAAATTAAAAATCTGAAATCAACAACTATATGGGATTGGAATCAAGAAAcgtttgaatataaaaaaatgccaCATCCTCCATGTAATATTCCAGTAATGGTATCTTGTATTGGTGGTCACGAAACAATTAATTGGCCATGTTGGAATTCAAAACCAACATCATGTCAACGGGAATGTGGAAGGCAACTCGAATGTGGGAATCATACATGTCCACGATTATGTCATTCTGTTCCAGATTTAACTATACAAAATgaaCAAGAAGGTTGTATTCCTTGTACTGAGGAATGTAAAATGACACGACCAGATGGATGCATTCATCCATGTCGGAAACCTTGTCATTTACCGCCATGTGAAATATGTATtgttaacataaaaacaaattgtCATTGTGGCCTTACTCAAGTATATTATAAAtgcaatgatttttatttaccaGATAATTCTGTAAaacaagataaattaaaaagttgTGGAAATCGATGTATTAAAAAttattctTGTGGACATCGATGTACAGCAATTTGTCATTCTGGTATATGTCCAAATCCAGAGACttgtaaaaagaaaatgaaaatattttgtttatgtaaaAATCTTAAAGTTGAAATATCATGTGAAAAACATCGTAatggtattaaatttattgattgtaATGATACATGTGCAAAGAAAAGATCAGAAGAAAATCGTATACAAGAAGAAATGGAAGCAAAACAGAAACAATTAGAAGAAGAAAGGAATCGTATCGAATTAGAACAATTCGAAAAGAAATTTGGCAAAAAGAAATACAAAGAGAGAAAAACTACAGAAATTACAccgaaaaataatatgaatttaaaaattataattggaatTGGAGGCTTTTTTACTATACTTGCCATTTTTATAATGGTATATATGACATTGAATTAa
- Protein Sequence
- MRKQKQKSKNNTGAWNIGNNTTLTSSSSAAAPIAKNNAPTLKKFEEIRTKNEEKAKSIIYKDYESSSDEEDLNEKEILDKLFRNYSGNNQQLSKIQLFLEDFLQSGSAICLICIGTVKRTDSIWSCKNCYCFFHFNCLKRWSNDSIALQKLNADQNQSYYNNQGEYIQKKIKQIRWCCPKCRKDYSPDDIPKQYECFCGKEINPQNHPWLIPHSCGEICEKYLEPECGHKCLLLCHPGPCPPCPQNITISCKCEKSIPKTIRCFQKSWNCELKCQKVLICGIHKCEQICHPTGNCPPCTKQSKQKCQCGNESIERNCSQLIWQCKKVCNKSLSCSLHKCKKVCHSNGCGNCPLGLPRSCPCGKNKSIAPCSEIIDTCGDTCQKVLACGLHYCAQRCHKGDCSLCLAIVEKKCRCGLHKKEQPCSKIFTCETKCKLMRECQKHSCSKKCCDGQCPPCDKVCNKTLSCKKHKCKSICHDGPCYPCDLKSSVKCRCGNTSVTVPCGREKKTKTPKCIQLCRIPSKCHHDNPHKCHMNDCPPCVQKCGLLTSLCAHPCEAKCHDVVKVEIKNLKSTTIWDWNQETFEYKKMPHPPCNIPVMVSCIGGHETINWPCWNSKPTSCQRECGRQLECGNHTCPRLCHSVPDLTIQNEQEGCIPCTEECKMTRPDGCIHPCRKPCHLPPCEICIVNIKTNCHCGLTQVYYKCNDFYLPDNSVKQDKLKSCGNRCIKNYSCGHRCTAICHSGICPNPETCKKKMKIFCLCKNLKVEISCEKHRNGIKFIDCNDTCAKKRSEENRIQEEMEAKQKQLEEERNRIELEQFEKKFGKKKYKERKTTEITPKNNMNLKIIIGIGGFFTILAIFIMVYMTLN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01298086;
- 90% Identity
- -
- 80% Identity
- -