Basic Information

Insect: Empis stercorea
Gene Symbol: -
Assembly: GCA_949752835.1
Location: OX457087.1:12317169-12321067[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 8.4e-05 0.0085 17.3 0.8 1 23 175 197 175 197 0.97

2 15 0.00031 0.032 15.5 0.4 1 23 203 225 203 225 0.97

3 15 0.0017 0.17 13.2 0.1 1 23 329 351 329 351 0.98

4 15 0.029 3 9.3 3.0 1 23 357 379 357 380 0.96

5 15 9.8e-06 0.00099 20.2 3.6 1 23 410 432 410 432 0.98

6 15 0.02 2.1 9.8 0.2 1 23 453 475 453 475 0.94

7 15 0.41 41 5.7 0.2 1 23 481 504 481 504 0.87

8 15 0.36 37 5.8 0.4 5 19 515 529 512 530 0.91

9 15 0.00012 0.012 16.8 5.9 1 23 539 561 539 561 0.96

10 15 0.021 2.1 9.8 1.6 2 23 567 588 566 588 0.96

11 15 1e-05 0.001 20.2 1.0 1 23 596 618 596 618 0.98

12 15 0.0012 0.12 13.7 0.1 3 23 626 646 624 646 0.97

13 15 0.00016 0.016 16.4 0.9 1 23 652 674 652 675 0.95

14 15 6.9 7e+02 1.8 0.6 1 23 685 707 685 707 0.92

15 15 0.0075 0.76 11.2 0.1 1 20 1146 1165 1146 1168 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	8.4e-05	0.0085	17.3	0.8	1	23	175	197	175	197	0.97
2	15	0.00031	0.032	15.5	0.4	1	23	203	225	203	225	0.97
3	15	0.0017	0.17	13.2	0.1	1	23	329	351	329	351	0.98
4	15	0.029	3	9.3	3.0	1	23	357	379	357	380	0.96
5	15	9.8e-06	0.00099	20.2	3.6	1	23	410	432	410	432	0.98
6	15	0.02	2.1	9.8	0.2	1	23	453	475	453	475	0.94
7	15	0.41	41	5.7	0.2	1	23	481	504	481	504	0.87
8	15	0.36	37	5.8	0.4	5	19	515	529	512	530	0.91
9	15	0.00012	0.012	16.8	5.9	1	23	539	561	539	561	0.96
10	15	0.021	2.1	9.8	1.6	2	23	567	588	566	588	0.96
11	15	1e-05	0.001	20.2	1.0	1	23	596	618	596	618	0.98
12	15	0.0012	0.12	13.7	0.1	3	23	626	646	624	646	0.97
13	15	0.00016	0.016	16.4	0.9	1	23	652	674	652	675	0.95
14	15	6.9	7e+02	1.8	0.6	1	23	685	707	685	707	0.92
15	15	0.0075	0.76	11.2	0.1	1	20	1146	1165	1146	1168	0.94

Sequence Information

Coding Sequence: ATGGATAATCAAGGCTACGAGATTCATTGGGTTCCAGTTGATGGGACCGGTGTAAATCGTGTTGTTACATCTGATCAAATTATTACAATGGATCCGCAAAGCGATGATGATGATACAAATGGCCATCAAAGATATTTAGAAATATCATCAATACCAACAAATTTAGATCAAATTGCTgctgaaaatttgatttatatggCACAAGATGGTCAAATGGCAGCAATTTGTGAGGATGGTAATCATCATATGGCAACAATATGTGAAGATTTTATTGAAGAAGATCCACAAATTGAATCAGCTGTATTAGAGAATCAACAAAATCAATCTAGTTGTGGTGGTGAACAACAATATTTTGAATGTCAAGTAACTGAAGAAATTATTACAGATGATTGGGTACAACAGCAAGGTGAAGAAAGagtGGAAATTCCTGTTGACCAAATTGGTTGTGGAGATGTTCAACTTGTTGAAGAATTAGATGTTCCATTACCGACTGATCAAGATGAATATACAGCATTACGACCATATCCTTGTGATTTTTGTAGTCGTCGTTTTCGAAAAAAAGTTAGCCTTATGAATCATATGATTGCACATCAGAATGATAGACCACATATTTGTAATTTGTGTGGAGCACGTTACATTCGTCGAGCtgatttattaaatcatttaaaaattcatgcTAATATACCTGAACAGCATATTGACGAAATTGAtgataaatatttgCACTTAAATGATCATATTGAATCAAAAGCATATAGGAATGTTGATGGTGCTGGTGGTCCAAGTGATCATTATTATGATCAAGAATGGGACAATAATTATgatataaaaccaaaattaaaatctataaaaaataatcgaGTTGGAcgacaaaaaaaacataaaattaaagaagaagaaatttaTGAGAATACTGAAATTGGTGAAAATTTAATTGCAGAACAAGACGTACAACGATATCCAGTTTTAGATAAACGTAAACCATTTGTTTGTCAACAATGCGGTATTGCATTTGCACGCGAAAAAGCAATGTTATCACATTCAAGAattcaTGGTAATGATTCGCCATTTGAATGTGTAAATTGTAATGAAATGTTTTGGGATTTAACAACATTACATGATCACCAACGTACGCATCACTTCGAAGCTAGTAATTCGGAATATGAACCTGAACATGAAGAAGAAAATGATGAAAGTGAATCAgaaaatgaatcaaaatatggtgaattttattgtaatatatgtGGAATGTCTTTTCATCGTCAGGATTTATTGAGACGACATTCAAAAacacatataaaaaaagaaattatggaTATTAAAGGCAATAATAGTGATTATTTATCGTCATCACGTCATTGTTGTAATGTTTGCGGTGAGAATTTCGTTGAAGCATTAGATTTATTGGCACATGCTGAAGTTCATGCTAGATTTCAACCATTTAAATGCGTTTTATGTGGAGAAACTTTTCTGGAGGAAGCaacaattaaaaaacatttatcaAATGTTCATTCAAATGAAATGACATCAAATTCATGTATTTTATGTGGAAAACAATGTCGTGATCGTAAAGCATTAATCAAACATGCTTGGGATCATTCACGGGAAAAGAATCATTCATGTTCGAAATGTGGAAAAACATTTCATAATAAAGCAAGATTAAAACGTCACATGGTTTCTCATCGTAATAAATCAGTTACTTGTGATGTTTGTCATGAGGAATTCCCTGATGGTCGATCCTTAATGAATCATCGTCATTCACATTCAAATTCATCTGGTAAATTATTTCCATGTCATGAATGTGGTAAAACATTTGGTTCACGTAGTTCCCAACAAATTCATGTTCGTATTCATACTGGTGAACGGCCATATGGTTGTCGATATTGTTGGAAAGCTTTTGCTGATGGTGGTACATTAAGAAAACATGAAAGAATACATACTGGTGAGAAACCATATGCATGTTCGGTTTGTACACGAGCATTTAACCAAAGAGTTGTTCTACGTGAACATATACGATCACATCATTCAGCTATTGATAATAAACGTGGTACATATCATTGTACTGTTTGTTCCGATGAAATGTCATCATCATTAGAATTAATACAGCATTTGATACGTCATAGTGATATGAATACAGCTATGCAAAGGCAACCAATAACTGGGCCACGTAAATATAAACGTCGCAGAAAATTAAAACCACATGAATTAGAACGTTTACGTAATGATAAATCAGATATAGAATTTTCTGATTTAGATACATCAACTGCTGATGATATTCTTGGTATGATATCATCACGATCAACAACTgttaataataaacataaaaattcatcATCAACGGGGGGTGGTAATCGTTCAACATCACATCATCAAAATCGAAAtcgtaaatattcaaataattcgGATCGTTTATCTGGTGGTAATAGTTGGCcatcaaaattaatatcaacAACAAATGACGATTCATATAATGTagtattttcaaatttagataatgatatacaaaatattgaacCATTAGTTGTAGGTAGTACTacgaataataattatacaacaaTAGGtacaaaaaattctattaataataataatacaacatCAATAACAACATCGGGCTTAGGTGTAAAATCAAAAACGAGTGGTAAAACAAATTCAAGTGGCAATAATAaacgtaataataaaaatgatgaaaaatcaTCAAGACCAAAAATGATACATACACAAAAAACACGTGTACGAGTTGAAGATGGTAAACGTAAAACAAAAACCATGATTACACGAACTGAACAAATAAATACAGAACGTAAacgtcaaaataataataatattaataatgattacGAAATTActgatattttaacaaaatctaTACAAAATTATAGTCCAATGCGTATTAAACAAGAGACAAGTCAAAGTGATTTATATGATgcacaattattattagaaGCAGCTGCAACTAGAAATGAATTTGATAAATATAATCCAAGTGTTGTTAATGATTTAGAAGAAATATTACGATCACCAGAAAAATCTAAAACACCACCACCAAAAGTTAAAgttgaatataataatacaacaacaacaacaccaacaacccCAATTATTGAGGATGATGTTAGAAGATCAACACGTGCACGTAGACCAGTACCAAATcgtaaatatttagaatttgaaacaatatcatataataataataatcataaatcaccAAATGTTAAATCATCACCAACACAACgtaataaatcatataaaaatataggaaaaaataatacaatagatattaaattacaacaaaataataatataaatttattaaatgaagaaTCTACAACAACAACttcacaaattaaaattattcatatgaataataataatataattaattcatcTGTTAAACAAGAACCTGTTGTTGTACCCGAAgtaaaagaacaaaaatattttaaatgtgaaATGTGTTCAGCGATATTTACAGATCGAGCACAACTTTTAGATCATGTACCAATTCatatatga
Protein Sequence: MDNQGYEIHWVPVDGTGVNRVVTSDQIITMDPQSDDDDTNGHQRYLEISSIPTNLDQIAAENLIYMAQDGQMAAICEDGNHHMATICEDFIEEDPQIESAVLENQQNQSSCGGEQQYFECQVTEEIITDDWVQQQGEERVEIPVDQIGCGDVQLVEELDVPLPTDQDEYTALRPYPCDFCSRRFRKKVSLMNHMIAHQNDRPHICNLCGARYIRRADLLNHLKIHANIPEQHIDEIDDKYLHLNDHIESKAYRNVDGAGGPSDHYYDQEWDNNYDIKPKLKSIKNNRVGRQKKHKIKEEEIYENTEIGENLIAEQDVQRYPVLDKRKPFVCQQCGIAFAREKAMLSHSRIHGNDSPFECVNCNEMFWDLTTLHDHQRTHHFEASNSEYEPEHEEENDESESENESKYGEFYCNICGMSFHRQDLLRRHSKTHIKKEIMDIKGNNSDYLSSSRHCCNVCGENFVEALDLLAHAEVHARFQPFKCVLCGETFLEEATIKKHLSNVHSNEMTSNSCILCGKQCRDRKALIKHAWDHSREKNHSCSKCGKTFHNKARLKRHMVSHRNKSVTCDVCHEEFPDGRSLMNHRHSHSNSSGKLFPCHECGKTFGSRSSQQIHVRIHTGERPYGCRYCWKAFADGGTLRKHERIHTGEKPYACSVCTRAFNQRVVLREHIRSHHSAIDNKRGTYHCTVCSDEMSSSLELIQHLIRHSDMNTAMQRQPITGPRKYKRRRKLKPHELERLRNDKSDIEFSDLDTSTADDILGMISSRSTTVNNKHKNSSSTGGGNRSTSHHQNRNRKYSNNSDRLSGGNSWPSKLISTTNDDSYNVVFSNLDNDIQNIEPLVVGSTTNNNYTTIGTKNSINNNNTTSITTSGLGVKSKTSGKTNSSGNNKRNNKNDEKSSRPKMIHTQKTRVRVEDGKRKTKTMITRTEQINTERKRQNNNNINNDYEITDILTKSIQNYSPMRIKQETSQSDLYDAQLLLEAAATRNEFDKYNPSVVNDLEEILRSPEKSKTPPPKVKVEYNNTTTTTPTTPIIEDDVRRSTRARRPVPNRKYLEFETISYNNNNHKSPNVKSSPTQRNKSYKNIGKNNTIDIKLQQNNNINLLNEESTTTTSQIKIIHMNNNNIINSSVKQEPVVVPEVKEQKYFKCEMCSAIFTDRAQLLDHVPIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01297808; iTF_00643465;
90% Identity: -
80% Identity: -