Basic Information

Insect: Empis stercorea
Gene Symbol: -
Assembly: GCA_949752835.1
Location: OX457089.1:3072086-3076468[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 4.1e-05 0.0042 18.3 2.9 1 23 411 433 411 433 0.98

2 18 0.00042 0.043 15.1 0.3 1 23 439 461 439 461 0.97

3 18 7.6e-05 0.0077 17.4 1.7 1 23 467 489 467 489 0.98

4 18 2.2e-05 0.0023 19.1 3.1 1 23 495 517 495 517 0.97

5 18 5.1e-05 0.0051 18.0 4.7 1 23 523 545 523 545 0.99

6 18 9.3e-05 0.0094 17.2 5.7 1 23 551 573 551 573 0.97

7 18 4.4e-07 4.4e-05 24.5 4.3 1 23 579 601 579 601 0.98

8 18 2.2e-06 0.00022 22.3 3.2 1 23 607 629 607 629 0.97

9 18 9.5e-05 0.0096 17.1 6.7 1 23 635 657 635 657 0.97

10 18 8.7e-05 0.0088 17.2 6.4 1 23 663 685 663 685 0.98

11 18 4.6e-06 0.00047 21.3 4.5 1 23 691 713 691 713 0.98

12 18 5.5e-05 0.0056 17.9 8.3 1 23 719 741 719 741 0.98

13 18 1.1e-05 0.0012 20.0 8.9 1 23 747 769 747 769 0.98

14 18 2.4e-06 0.00024 22.2 7.9 1 23 775 797 775 797 0.98

15 18 0.00031 0.031 15.5 9.5 1 23 803 826 803 826 0.95

16 18 0.00019 0.02 16.1 0.4 1 23 832 854 832 854 0.97

17 18 0.0008 0.081 14.2 4.3 1 23 864 886 864 886 0.99

18 18 7.3e-06 0.00073 20.6 2.3 1 23 892 915 892 915 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	4.1e-05	0.0042	18.3	2.9	1	23	411	433	411	433	0.98
2	18	0.00042	0.043	15.1	0.3	1	23	439	461	439	461	0.97
3	18	7.6e-05	0.0077	17.4	1.7	1	23	467	489	467	489	0.98
4	18	2.2e-05	0.0023	19.1	3.1	1	23	495	517	495	517	0.97
5	18	5.1e-05	0.0051	18.0	4.7	1	23	523	545	523	545	0.99
6	18	9.3e-05	0.0094	17.2	5.7	1	23	551	573	551	573	0.97
7	18	4.4e-07	4.4e-05	24.5	4.3	1	23	579	601	579	601	0.98
8	18	2.2e-06	0.00022	22.3	3.2	1	23	607	629	607	629	0.97
9	18	9.5e-05	0.0096	17.1	6.7	1	23	635	657	635	657	0.97
10	18	8.7e-05	0.0088	17.2	6.4	1	23	663	685	663	685	0.98
11	18	4.6e-06	0.00047	21.3	4.5	1	23	691	713	691	713	0.98
12	18	5.5e-05	0.0056	17.9	8.3	1	23	719	741	719	741	0.98
13	18	1.1e-05	0.0012	20.0	8.9	1	23	747	769	747	769	0.98
14	18	2.4e-06	0.00024	22.2	7.9	1	23	775	797	775	797	0.98
15	18	0.00031	0.031	15.5	9.5	1	23	803	826	803	826	0.95
16	18	0.00019	0.02	16.1	0.4	1	23	832	854	832	854	0.97
17	18	0.0008	0.081	14.2	4.3	1	23	864	886	864	886	0.99
18	18	7.3e-06	0.00073	20.6	2.3	1	23	892	915	892	915	0.97

Sequence Information

Coding Sequence: atgaattcGGAACGATCAGGTGAACAACATTCTTCTGATCATTTGAATGCTGCTGACCATTCCAGTGATTCGCAAAGACAGCAACAAACATCACCAccacaacaacaccaacaacaacaacataacacAAATCATCAGCAGCAGCAAATTGAGCATCAGCAACAACATGATAATAGAGTACTTGGTGGTGTTATTCATCCAGTTAATGAAGCTGATATTAAACAGCCTTTACCACTTTCGAATGCTCCACAATTAGGAAAATACTGGGTTGTTACAAATTTGTTTCAAGGTCATGGACAAAATACTTATAATTTGGGTTCACCACCAACGACATCATCAGTTCCTACATTACCACCTCCTATATCATCTACCCATACATCAACAGCAATTTCTTTACCAAAACCACAAATTATTAAACAAGAAGATATGCAACGACACACAAATCCAACTGCACAATTGGTAACATCAGTTAGTTCAAGTTCTATACAAATACCAAATGCATTGATAAATACATCAAATAGTCAACTACAAATGTCTAATGGTACAATGATTTCATCATCACAAGCAGAACAATTACAAGTTCAAATAAATTCTGGAAATAATATAATGGTAATGGATACATCTCATTCTGCTGTCGTGAAAcatgataaaattaattctatgaacgttcaaaatataaataatgatgaaatggGTATTGGAAGAAATATACCGAATATACTTCAACAAACTATTAAACAAGAAAAACCATTTGTTAATGGTAAATCAGTAACAACACATTtacaaatacaacaacaacaacaacaattaccaCCAGATAGTAAAATGCATGTATCACATTTATTAGATGTAAGAAATCCAGATGGTTCACCAATTAAAATTCAACCATCTGATCAAGAATTAGGAAAATCTTTAGGTGTTGAAATGTATAAAGTTAATATTGAAGATTTGAGTCAGTTTTTATCGTATCATGAGGTTTTTGGTAAACTTCATGGTGATGTCATAACTCATCCAGTTTCACATACAACATCCCAACCAACTATTGTAGGTAGTAATACAATTACTGTAACAACAAATGCAAATAGCACTATTGGAACACCTAATATTACAAATACTACTGGTGATTTGCTAATGcctaaaatggaaaatataaatcaaatatcCGGTGTAAATAATACTGTAACAGATCCACATTTAATTGGTGATGCAGGAGCAATACCACCAGCTAATCATACCTGTGATATATGCGGAAAAATGTTTCAATTTCGATATCAGTTAATTGTGCATCGTCGTTATCATAGCGAACGTAAACCATTTAATTGTCAAGTTTGCGGACAAGGTTTTCAAACTTCACAAGATTTAACCAGTCATGGAAAAATACATATCGGTGGTCCAATGTTCACATGTACAGTATGCTTTCATGTTTTTGCTAATGATGCCAGTTTAGAAAGACACATGAAAAGACATTCAACTGATAAACCTTTTGCATGTACAATATGTCAAAAAACGTTTGCTAGAAAAGAACATTTGGATAATCATTTTAGAAGTCATACCGGTGAAACACCATTTCGTTGTCAATATTGTGCAAAAACCTTTACCCGTAAGGAACATATGGTCAATCATGTCCGAAAACATACCGGTGAAACACCACATAGATGCGATATTTGTAAGAAATCGTTTACTAGAAAGGAACATTATGTTAACCACTACATGTGGCATactgGCGAAACTCCTCATCAATGTGAAGTTTGTGGAAAGAAATATACTCGAAAAGAACATTTAGCTAATCATATGAGATCACATACAAATGATACACCATTTCGGTGTGAAATTTGTTCAAAGAGTTTCAGCAGAAAGGAACATTTCACAAATCATATATTATGGCATACTGgAGAAACGCCACACAGATGTGATTTCTGTTCAAAAACTTTTACGAGAAAAGAACATCTTTTAAATCATGTTCGACAACATACAGGAGAATCTCCACATCGATGCACTTATTGTCTTAAAACTTTTACACGAAAAGAGCATTTGGTAAATCATGTACGTCAACATACTGGTGAGACACCATTTAAGTGTACCTATTGTACAAAAGCGTTTACTAGAAAAGATCATATGGTAAATCATATAAGACAGCATACTGGTGAGTCACCACATAAGTGCACATTTTGCACAAAAACATTTACAAGAAAAGAACACCTTACAAATCATGTTCGTCAACATACTGGAGAATCTCCTCATAAATGCACATATTGTAAGAAAACATTTACTAGAAAAGAACATCTAACAAATCACACTCGTTTACATACTGGTGATTCGCCCCATAAATGTGAATATTGTCAGAAAACTTTTACACGAAAGGAGCATTTGAATAATCACATGAAACAACATTCTAGTGATAATCCGCACTGTTGTAATGTTTGTAATAAACCATTCACTAGAAAAGAACATCTTATAAATCATATGTCGAGATGTCATACAGGCGATCGTCCTTATGCATGTGAAACATGTGGAAAATCTTTCCCACTTAAgggtaatttattatttcatcaaAGAAGTCATACTAAAGGTCAACCACAAGAGCGTCcatttaaatgtgaaaaatgtcctaaagattttatttgtaaaggtcATTTGGTTTCACATATGAGGTCACATTCTGGTGAAAAACCACACAGTTGTACCTTATGTAGTAAAGCATTTGtagaaaaaggaaatttaaagcGTCATATGAAAATGAATCATCCTAATGCAGTATTACCAACACCTGGtctaattacaaatataaaaacagaaataaatccAATAACAATTAATTCCAAACCTGTTGTTACATCAGCACAATATCTAAATGAAAGAATTCCATTAATAactaaagcaaatattttaccaataaataatttagtgcAACATCAACCACCAACAATGCATACCATACAGCAGATAACATCATCCATAGGTACGACTACTGGCAGTGGTAATACTAATTCAACATTATCTGGTGGATTGGTACCACTAGTAACATCCACTATTACATCTCATACTAGTccacaacaacatcatcaacaacaacaacaacaacaacaacaacaacaacaacaacagcagcagcaacatcaacatcaacatcaacaacataTGACATCTCAGATGATTCAATCATCTGTAAATGCTGGAAATCCAAGTGATACAACACAACAGCAACAAAGTGTACCAATTACTATTATTCAAACAGCAGATCCATCTAATATAGGTCGGGCTACTATACAAATACAACATTTACAACCAAATGTTGAGCAACATCCCgtagtatattaa
Protein Sequence: MNSERSGEQHSSDHLNAADHSSDSQRQQQTSPPQQHQQQQHNTNHQQQQIEHQQQHDNRVLGGVIHPVNEADIKQPLPLSNAPQLGKYWVVTNLFQGHGQNTYNLGSPPTTSSVPTLPPPISSTHTSTAISLPKPQIIKQEDMQRHTNPTAQLVTSVSSSSIQIPNALINTSNSQLQMSNGTMISSSQAEQLQVQINSGNNIMVMDTSHSAVVKHDKINSMNVQNINNDEMGIGRNIPNILQQTIKQEKPFVNGKSVTTHLQIQQQQQQLPPDSKMHVSHLLDVRNPDGSPIKIQPSDQELGKSLGVEMYKVNIEDLSQFLSYHEVFGKLHGDVITHPVSHTTSQPTIVGSNTITVTTNANSTIGTPNITNTTGDLLMPKMENINQISGVNNTVTDPHLIGDAGAIPPANHTCDICGKMFQFRYQLIVHRRYHSERKPFNCQVCGQGFQTSQDLTSHGKIHIGGPMFTCTVCFHVFANDASLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGETPHQCEVCGKKYTRKEHLANHMRSHTNDTPFRCEICSKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCTYCLKTFTRKEHLVNHVRQHTGETPFKCTYCTKAFTRKDHMVNHIRQHTGESPHKCTFCTKTFTRKEHLTNHVRQHTGESPHKCTYCKKTFTRKEHLTNHTRLHTGDSPHKCEYCQKTFTRKEHLNNHMKQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPYACETCGKSFPLKGNLLFHQRSHTKGQPQERPFKCEKCPKDFICKGHLVSHMRSHSGEKPHSCTLCSKAFVEKGNLKRHMKMNHPNAVLPTPGLITNIKTEINPITINSKPVVTSAQYLNERIPLITKANILPINNLVQHQPPTMHTIQQITSSIGTTTGSGNTNSTLSGGLVPLVTSTITSHTSPQQHHQQQQQQQQQQQQQQQQQHQHQHQQHMTSQMIQSSVNAGNPSDTTQQQQSVPITIIQTADPSNIGRATIQIQHLQPNVEQHPVVY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01297750;
90% Identity: -
80% Identity: -