Eliv011349.1
Basic Information
- Insect
- Empis livida
- Gene Symbol
- nfxl1
- Assembly
- GCA_963932195.1
- Location
- OZ010647.1:48247768-48251884[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 4 2e+04 -7.8 5.6 15 19 171 175 170 175 0.81 2 19 0.26 1.3e+03 -0.3 0.4 4 10 206 212 205 212 0.95 3 19 6.1e-08 0.00031 20.9 17.0 1 19 220 237 220 237 0.99 4 19 2.9 1.5e+04 -3.7 1.2 6 10 263 267 262 267 0.87 5 19 0.00014 0.73 10.1 11.5 1 19 273 290 273 290 0.95 6 19 2.7 1.4e+04 -3.6 1.8 6 10 315 319 314 319 0.89 7 19 1.6e-08 8.2e-05 22.7 12.2 1 19 325 343 325 343 0.99 8 19 1.7 8.4e+03 -2.9 0.5 1 8 368 374 367 375 0.50 9 19 8.1e-08 0.00041 20.5 8.6 1 18 378 395 378 396 0.96 10 19 0.17 8.5e+02 0.3 1.2 1 10 405 414 405 414 0.93 11 19 4 2e+04 -5.0 2.3 5 10 419 424 419 424 0.91 12 19 6.6e-05 0.33 11.2 16.6 1 18 430 447 430 448 0.92 13 19 1.1e-07 0.00053 20.1 10.0 3 18 459 474 457 475 0.91 14 19 0.87 4.4e+03 -2.0 8.0 10 18 522 530 519 531 0.93 15 19 0.022 1.1e+02 3.1 5.1 3 12 542 551 534 551 0.83 16 19 2.2e-05 0.11 12.7 4.2 1 12 620 631 620 631 0.97 17 19 4 2e+04 -4.7 1.5 15 19 644 648 644 648 0.84 18 19 0.056 2.8e+02 1.8 14.2 3 19 660 676 659 676 0.93 19 19 0.00039 2 8.7 10.4 1 16 727 741 727 747 0.86
Sequence Information
- Coding Sequence
- atgcgtaaacaaaagcaaaaagctaaaaataataacgGCTCATTTAACTCGACCTTGTCCTTATCAAATACAGCTGCAATCGCTAAAAATGAatctacattaaaaaaatttgaagaaattcgtagtaaaaatgaagaaaaagcAAAGTCAATCATATATAAGGATTATGAATCTAGTTCTGATGAAGaagatttaaatgaaaaagaaattttaagtgaattatttcgaaattattcgGGGAATGGTCAACAACTATCAAAGATTCaggaatttttagaaaattttttacagtCCGGTTCTGCAATTTGTTTAATATGTATTGGTACAGTTAAAAGAACTGATTCAATTTGGTCATgcaaaaattgttattgtttttttcatttaaattgtttaaaacgTTGGTCTAATGATACTATAGCATTACAAAAACTAAATGCTGATCAAAATCAAAGTTATTATAACAACCAAGGtgaatttatacaaaaaaaaataaaaccaattcGTTGGTGTTGTCCAAAATGTCGTAAAGATTACCCACCTGAGGATATACCCAAACAATATGAATGTTTCTGTAGTAAAGAGATAAATCCACAAAATCATCCATGGTTGATACCACATTCTTGTGGAgaaatatgtgaaaaatatttggaacCAGAATGTGGtcataaatgtttattacTCTGCCATCCtgGTCCCTGTCCGCCATGCCCACAAAATATAACGATTTCATGTAAATGTGAAAAATCACTTCCAAAAACCATTAGatgttttcaaaaatcttGGAGCTGCGAATcgaaatgtcagaaaactttaatttgtGGAATACACATATGTGAAGAAATATGTCATTCAAAATGTCCAGAATGTAAAAGACGAAGTATAAAAAAGTGTCTGTGTGGTAATGAATTTTCTGAAAGGAATTGTTCTCATTTAAAATGGCAGtgcaaaaaagtaTGTAATAAAACATTGACTTGTGGTTTACATAAATGTAGAAAAGTCTGTCATGCTGGAGATTGCGGTGATTGTCCATTAGGTTTACCAAGAGCATGTCCTTGtggaaaaaataaATCAATTGCTCCTTGTAGTGAAATTATTGATACTTGTGGAGATACATGTCAAAAGGTTTTAGCTTGTGGATTACATTATTGTACTCAGAGATGCCACAAAGGAGATTGTAGTTtgtgttTAGCAATTGTTGAGAAGAAATGTAGATGTGGATTACATAAAAAAGAGCAGCCATgtacgaaaatatttacatgcgaaacaaaatgtaaattaatgaGAGAATGCCAGAAACATTCTTGTAGCAAAAAGtgtTGTGATGGACAATGTCCACCATgtgataaaatttgtaataaaacacTTTCatgtaaaaaacataaatgcaAATCAATTTGCCATGATGGAGCATGTTATCCATGTGATTTAAAATCATCAGTGAAATGCCGATGTGGTAATACATCAGTAACAGTTCCATGTGGACGtgaaaagaaaactaaaaccCCCAAATGTGTACAGTTATGCAGACTACCGTCAAAATGTCATCATGAAAATCCACATAACTGTCATATGAATGAATGTCCACCATGTGGACAAAAATGTGGTTTATTAACATCATTATGTGTTCACCCGTGCGAAGCAAAATGTCACGAtgcaattaaaatagaaatcaaAACTACAAAAGGGACAACTATTTGGGATTGGCAACAAGAAAcgtttgaatataaaaaaatgcctCATCCTCCATGCGCAATTCCTGTTATGGTATCTTGTATTGGTGgtcatgaaattattaattggcCATGTTGGAATTCAAAACCTTCCTCATGTCAACGAGAATGTGGACGACAACTTAAGTGTGGAAACCACTTTTGTACACGATTATGTCATTCTGTTACGGATTTGGCTGTACAAGATgaACAAGACGGTTGCCTCCCTTGTACCGAGGAATGTAAAGTAATTCAACCAAATGGATGTATTCATCCATGTAAGAAAGCCTGTCACCCACCACCCTGTGAAATATGCactgttaatataaaaacaaattgtcaCTGTGGCCTTACtcaagtttattataaatgcaACGATTTTTATTTAGCTGATAATTCTGGAAATTCTATAATAGAGAAAAGagagaaattaaaaagttgtgGAAATCgatgtataaaaaatTATTCATGTGGCCATAGATGTACAGCGATCTGTCATTCTAGTACATGTCCAAATCCAGAAAATtgcaagaaaaaaatgaaaatatattgtttgtGTAAAAATCTTAAAGTGGATATATCTTGTGAAAAATATCGTAATGGTACCAAATTTATTCAATGTGATGATACGTGCACAAAGAAAAAAGCAGAAGAAGATCGTATTAAACTAGATATGGCAGCTAAACTTAAGCAattagaagaagaaaaaaatcgACTAGAATTAGagcaatttgaaaaaaaatttgctaaaaagaaatataaggAGAGAAAAGCTATTGAAATTATtccgaaaaataatattgaattaaaatttataattggagTTGTAGGTCTTTTTACTATAGTTGctttgtttataataatatatttaatatga
- Protein Sequence
- MRKQKQKAKNNNGSFNSTLSLSNTAAIAKNESTLKKFEEIRSKNEEKAKSIIYKDYESSSDEEDLNEKEILSELFRNYSGNGQQLSKIQEFLENFLQSGSAICLICIGTVKRTDSIWSCKNCYCFFHLNCLKRWSNDTIALQKLNADQNQSYYNNQGEFIQKKIKPIRWCCPKCRKDYPPEDIPKQYECFCSKEINPQNHPWLIPHSCGEICEKYLEPECGHKCLLLCHPGPCPPCPQNITISCKCEKSLPKTIRCFQKSWSCESKCQKTLICGIHICEEICHSKCPECKRRSIKKCLCGNEFSERNCSHLKWQCKKVCNKTLTCGLHKCRKVCHAGDCGDCPLGLPRACPCGKNKSIAPCSEIIDTCGDTCQKVLACGLHYCTQRCHKGDCSLCLAIVEKKCRCGLHKKEQPCTKIFTCETKCKLMRECQKHSCSKKCCDGQCPPCDKICNKTLSCKKHKCKSICHDGACYPCDLKSSVKCRCGNTSVTVPCGREKKTKTPKCVQLCRLPSKCHHENPHNCHMNECPPCGQKCGLLTSLCVHPCEAKCHDAIKIEIKTTKGTTIWDWQQETFEYKKMPHPPCAIPVMVSCIGGHEIINWPCWNSKPSSCQRECGRQLKCGNHFCTRLCHSVTDLAVQDEQDGCLPCTEECKVIQPNGCIHPCKKACHPPPCEICTVNIKTNCHCGLTQVYYKCNDFYLADNSGNSIIEKREKLKSCGNRCIKNYSCGHRCTAICHSSTCPNPENCKKKMKIYCLCKNLKVDISCEKYRNGTKFIQCDDTCTKKKAEEDRIKLDMAAKLKQLEEEKNRLELEQFEKKFAKKKYKERKAIEIIPKNNIELKFIIGVVGLFTIVALFIIIYLI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01298086;
- 90% Identity
- -
- 80% Identity
- -