Eliv011627.2
Basic Information
- Insect
- Empis livida
- Gene Symbol
- -
- Assembly
- GCA_963932195.1
- Location
- OZ010647.1:52804781-52810099[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 4.2 2.6e+02 2.6 0.5 1 15 43 57 43 64 0.74 2 18 8.5e-05 0.0051 17.4 1.0 1 22 198 219 198 219 0.95 3 18 0.014 0.82 10.4 0.6 2 23 243 265 242 265 0.95 4 18 8.4e-06 0.00051 20.5 2.9 2 23 279 300 278 300 0.97 5 18 0.04 2.4 8.9 0.9 2 23 321 342 320 342 0.96 6 18 0.071 4.3 8.2 0.9 1 19 386 404 386 407 0.94 7 18 0.00074 0.044 14.4 3.5 1 22 414 435 414 435 0.95 8 18 6.1e-05 0.0037 17.8 2.6 1 23 504 526 504 526 0.98 9 18 2.3e-05 0.0014 19.1 0.8 2 23 553 574 552 574 0.96 10 18 0.025 1.5 9.6 1.3 1 23 580 603 580 603 0.97 11 18 0.0077 0.47 11.2 0.7 1 23 613 636 613 636 0.97 12 18 0.0072 0.44 11.3 0.7 1 23 686 708 686 708 0.99 13 18 0.0054 0.33 11.7 1.9 1 23 714 737 714 737 0.95 14 18 0.00037 0.022 15.3 1.2 1 23 746 769 746 769 0.97 15 18 0.00092 0.055 14.1 4.9 2 23 830 851 829 852 0.94 16 18 0.18 11 6.9 2.7 1 23 858 881 858 881 0.88 17 18 0.00027 0.016 15.8 1.5 1 23 928 950 928 950 0.96 18 18 3.7e-06 0.00022 21.6 4.0 1 23 954 976 954 976 0.98
Sequence Information
- Coding Sequence
- atgataaataataatgtaaaacgTGAAATTGATATTGATTTTGAAGATGAAAGATTAGATataaaagatgaaaattatCATTCTAAATGTGGTGAAATATTTGTATCAAAAGATAaagaatttacattttattgcagTATTTGTAatgagaattttttaaattttaatttgttctcTGAACATGTTCTGTATGATCAGAATCATGCAAatcaattagtttttttgaataattgtaCAAATGcaaatagtaattttactGCAGCATCATTAGCACTGCCATCTTCATCGGTTACACTTGCAAATAATCCATTCAGGGATTATCCAAACTGTGAAAGTATTGTCAAAACAGAATTAACAATTGATGACAAATATGATTATTGTGAAGAAAaatcatcaaatatttttgttgatgaaATGTTGGAAGTTATATCAGCACCGCCAGCTGGATCGTATCAAAGTGCTGAATTTAATGAACAAACTgaattttgtgaattaaatGAAGAACCAATAATATTAGCAAATTTACGAGAAGAAATTATGCAAGaggaaatttcaaataattcaacagGGAGTAACAATTATGCTGGTTTTCATAAATGTAATTTCtgtgaaaaagaattttcaagagcatggaatttaaatattcatttgaaacgttgtaaattaaatgtagaaaaaattgaatatccACAATTATATAAGCCAGATTCAGCAGCTATTAAAATCATGTGTCCAATATGTAAAATGTCATTTCAGCGtgaagttaatttaaattttcatttaaaaaaatatcataaaaatactgTATGGGCTCACACGGAGGAAAGTCTTTTAAAATGTGACCTGTGCAATACTTCTTTTAAACGACGCGAATATCTAAGGAAACACATTAAAAGGCATATGGCTAAACATCGGAAGCAACAATTTATACCAAATCCTATTGCATCTGATTATAAATTGGAATGTAAatcatgtaatttaaaatttgatgaagAATATCAGTTATTTGCACATAAAACTACACACTTATATACAGAATCAAATGAATGGGATCCAAAAATTTCAGCTTCTAGTACACCTATGACttatgataataatgaaaaaaatccaTTCGAATTTATCGATGAATCTACATTTAAAGAAACAAATCAACAATTCAAATGCGAAAAATGTGATGGGTCTTATGATAATGAGGAATCACTAAAAATGCataattgtattaatatatttgacaGGCCTCATCAATGTTTATCATGTAATAGAAGCTTTATGTAtcaatcttatttaaaaagacATATGAAGAGATGTGCTATGAAGaatatgattaataaattggacaataaaaatgattacttTGATAGATTTGATAAATATGAGGAAAGTTCGATTAAAAATACCTTTCATTCCATTCCATCAACTGATAATATACAGTTACCTACTGCACCAATTTCATCAACAATAAATTCACAACAAAAACGTAAGGCAAgtggtaatttattattaaaattatttaaatgtaaattttgtaaaaaagtcTTTAgattgaaaatcaatttacaaaatcatttaagtattcatttaaaaagccaaaataaaagtattataactgaaaatatgacaacaataaataaacttcAATTGACACCGCCatcattaaaatgtaaaatttgtggCCGCaaatttaaacagaaaatttctttaatgatACACGAACGTGGCCATTCTGATGATAAACCATATGAATGTGATTTATGTCAATTGAAGTTTTATTCAcaaggatatttaaattttcatcaaaagagtatacataaaatattgtcagttggtaataaatcatttaattgtgaaatatgtagtaacaaatttttaaacagatcacttttaaatatacatatgaaTAAAATACATGGAACAGATGAAGTTAAAAAACTTTCAAGTGAACAATCTACTTCGTCATTTCCAGTAGAATTTACAAATTTCGGTGAAAATCTAACACAACTGTCATCAAGTAAAATAATTCCTGTAAACATTTCAAATGAAACAACAAGGACATCATATAAATGTCGCTTTTGTCCAAAACTTATAAATCGGCgtactaatttaataattcatgaACGTATTCATTTGGGTCAACGTCCCCATTCGtgtgaaatatgtaaaaaaacatttccatCAATTAGTTATGTTAAATTGCATAAGAAAAATGCTCATAATATCATGCTACCACGAATTCAATATCAATGTAAATATTGTCCGAAAATTACTACAACTGAATATTTTCTAACTTTACATATTAACAATTCCCATCGTGATGAATGTCCACATGAATGTAACAGTTGTTTAAAAAGATTTGAACTTATTGATGACATGAATATGCATTGTAAAATTGAACATTCAACATTGAATCGTGTTGAAAACATTACATCACATGAAATTTCTGAAACCAGTGAAGATAAATTAAAGGtaaataatgatgaaaatatattaaagtgtAGATTTTGTtcgaaaagttttaataatttatataaattgaatattcatCAACGTAATCATCATAATGGTGAAAAAccatattattgtaatttgtgtgataaaaatttttcatgtgCTCCATATTTATGGAAACATAATCAATTTTGGCAcaaagaaaaaacaacaacatcgaaatcttcaaaaatattttcacctAATTCAAGTAAGACAAATAATCAGCCAGAAAATGATTTAACAACATCGACTACAAAATCGAAAACTTCAAAagaagattattatttatatgttcaTTCTTGTGAGATTTGcggtaaaaaatttaaaaaaattgcttatCTAAAAATGCATGTGGCTAAACATACTGATGCttttaaatgtgaaatttGTGGGAAACGTTGTTCGAGTtcacataatttaaatgttcacCAACAAATCCATGTCAATGATAAATTGAATTCATCAAACACAAAATCTGATAAAACTGATATTAGTGTGGCTACAAAAACGGAAATATCGGATAATTTATCAAAAGCTGTTAATTCatgtataaaaaacaaaatgagtATTATAGGTGCTTCGAAATTTTACAATCTTGATTTTAGGATGTTGTACAAAAATGTGGCGATAAAACGAAAAgaattgaatgaaaaattaaatataaataacgcAAAACCATGTGACACTAATGAGATAACATCTTCTATTGTTGGAATTTCCACGACAAATAAGTTCTTTACAAATCGTAaacgaatttataaaaaacgaGCTTCAGCAGCTCtagaaaattcgaaatttcgaCAAGAAGGTACAAAAGAAAGAGATGCATTAATTAAAGCTGTTCGATTATATGAAGCCGGAGAATTATCACAAGCTCAAGTAgcaaaatcttttaatatttctgttgCTTCATTGTGCCGTCATATGAGCACAGTGCCACGAATTGATGATACACAAGAAATAATATCATCAAATAAGATAAGTAATAGTATAGtcgaaattaataatgaaaaatcaataaaagttCCAACAGATTTAAGTACATGGTTTACAGAAAATTCTTCAAACTCAGACAATGAAGATATTGAAATCGGCGAAGTTATGAAAGCACAAGAATGTTTcggaaatgtaaataaatccGAAAACATGGACTTCAAAgaaattcgaaaaattttatCGCAACCATCAAAAACTCTTACCACAATTAATATCGATAACAATTTggagaaatttaatgaagacAAAATGAATATTGATTATCAAATTGGATCAGATTACGGCAAATCAGAAAAAGATATAgatgattataaatttgacaATCAACAAAATAGTGTACGGCGACAtccaattgaaaaaatatctaaGGCAGTGGAAGAATACAAAAAAGGGGGTGTATCACAAAGTAAAATTTGtgaaacttataaaatttctctATCAACATTGAAACGTCACTtgaaaaaatcgaaaaaaataaatttgccaCACATTTATGCAATGTCTCCGATGATTAGAACAAATCAACAAGATGACCAAGCGACCacaatacaaaatgaaattaatccttctaataatttaataaaagcaGTTAATTCTTGTCTTAAGAATAAAATGAGTATTATTGGAGCTTCTAAATTTTACAACTTAGATTTTAAGATGCTCTATAAAAATGTAGCAATAAAACGTAGagaattaatagaaaaattaaatcaaaataatatattatgtgaaaaagaaaatccaatattaaattatgaacaaaatttatttaatgatggTCAATTTTCTAGTAACATAAAAACTtctattttatcaaattcacAATCATCATCCATGAAATTGTTGTATAATcgtaaaaggaaatttaaaaaacgagTACCGTTTGCATTaggaaattcaaaatttcgtCAAGAAGGAACTGCCGAAAGAGCAGCATTACTTAATGCTGTTCGATTATACAGAAGTGGTGAAATGTCCCAAGTAAAAGCAgcaaaattttgcaatatatCTTTGGCAACATTATGTCGCCATATGAGTAGTGTACCAAAACTGGATGAAATTAAACAGTATGAATCATTAGAAGCTAGAAACAACGATGTGccaataaatattgaaaaagattATAATTGGCCAAATACTgctaatcaaaatatttatacaaatgaaaattatgataatataaaaactaatataagtGAAAAAGCAGCagaatattttgacaattcaaataaaaaaaatacaaatattgatttaaatgaaattttaaatcgtCCGTCAACGTTTTCTTCTTCAacaattgaatataataaagatGATGGACAATTTGATTCATTTTCTATGCATGAATTTGCTGAACATTCTGCATTTTTTTCATCTGATGATCAATTATCTTCATCTAAAATGGATAAAACTGTTGAATTACAAAGATgttcaattgaaaaaatttcaaaagctgtagaagaatataaaaaaggtGGCGTATCACaaagtaaaatatgtaaaacatATAGAATGTCATTGTCAACATTACAACGTTATTTAAAAGACGAAACAAAAGCAATATCACCAACGTATAAACAACCATTACCAACAACGTCAACaatttcaacattaaatatagaaaaaaattttaatgatgagaatttattaaaagctaTTTTTGCTGTACGTAATGAAGGACTTAGTCATTTTGATGCCGCAAATGCACATAATGTTTCTGTATCAGcattatatttatctttaacAAGAAATGAAGATAACCAGTAA
- Protein Sequence
- MINNNVKREIDIDFEDERLDIKDENYHSKCGEIFVSKDKEFTFYCSICNENFLNFNLFSEHVLYDQNHANQLVFLNNCTNANSNFTAASLALPSSSVTLANNPFRDYPNCESIVKTELTIDDKYDYCEEKSSNIFVDEMLEVISAPPAGSYQSAEFNEQTEFCELNEEPIILANLREEIMQEEISNNSTGSNNYAGFHKCNFCEKEFSRAWNLNIHLKRCKLNVEKIEYPQLYKPDSAAIKIMCPICKMSFQREVNLNFHLKKYHKNTVWAHTEESLLKCDLCNTSFKRREYLRKHIKRHMAKHRKQQFIPNPIASDYKLECKSCNLKFDEEYQLFAHKTTHLYTESNEWDPKISASSTPMTYDNNEKNPFEFIDESTFKETNQQFKCEKCDGSYDNEESLKMHNCINIFDRPHQCLSCNRSFMYQSYLKRHMKRCAMKNMINKLDNKNDYFDRFDKYEESSIKNTFHSIPSTDNIQLPTAPISSTINSQQKRKASGNLLLKLFKCKFCKKVFRLKINLQNHLSIHLKSQNKSIITENMTTINKLQLTPPSLKCKICGRKFKQKISLMIHERGHSDDKPYECDLCQLKFYSQGYLNFHQKSIHKILSVGNKSFNCEICSNKFLNRSLLNIHMNKIHGTDEVKKLSSEQSTSSFPVEFTNFGENLTQLSSSKIIPVNISNETTRTSYKCRFCPKLINRRTNLIIHERIHLGQRPHSCEICKKTFPSISYVKLHKKNAHNIMLPRIQYQCKYCPKITTTEYFLTLHINNSHRDECPHECNSCLKRFELIDDMNMHCKIEHSTLNRVENITSHEISETSEDKLKVNNDENILKCRFCSKSFNNLYKLNIHQRNHHNGEKPYYCNLCDKNFSCAPYLWKHNQFWHKEKTTTSKSSKIFSPNSSKTNNQPENDLTTSTTKSKTSKEDYYLYVHSCEICGKKFKKIAYLKMHVAKHTDAFKCEICGKRCSSSHNLNVHQQIHVNDKLNSSNTKSDKTDISVATKTEISDNLSKAVNSCIKNKMSIIGASKFYNLDFRMLYKNVAIKRKELNEKLNINNAKPCDTNEITSSIVGISTTNKFFTNRKRIYKKRASAALENSKFRQEGTKERDALIKAVRLYEAGELSQAQVAKSFNISVASLCRHMSTVPRIDDTQEIISSNKISNSIVEINNEKSIKVPTDLSTWFTENSSNSDNEDIEIGEVMKAQECFGNVNKSENMDFKEIRKILSQPSKTLTTINIDNNLEKFNEDKMNIDYQIGSDYGKSEKDIDDYKFDNQQNSVRRHPIEKISKAVEEYKKGGVSQSKICETYKISLSTLKRHLKKSKKINLPHIYAMSPMIRTNQQDDQATTIQNEINPSNNLIKAVNSCLKNKMSIIGASKFYNLDFKMLYKNVAIKRRELIEKLNQNNILCEKENPILNYEQNLFNDGQFSSNIKTSILSNSQSSSMKLLYNRKRKFKKRVPFALGNSKFRQEGTAERAALLNAVRLYRSGEMSQVKAAKFCNISLATLCRHMSSVPKLDEIKQYESLEARNNDVPINIEKDYNWPNTANQNIYTNENYDNIKTNISEKAAEYFDNSNKKNTNIDLNEILNRPSTFSSSTIEYNKDDGQFDSFSMHEFAEHSAFFSSDDQLSSSKMDKTVELQRCSIEKISKAVEEYKKGGVSQSKICKTYRMSLSTLQRYLKDETKAISPTYKQPLPTTSTISTLNIEKNFNDENLLKAIFAVRNEGLSHFDAANAHNVSVSALYLSLTRNEDNQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00643138;
- 90% Identity
- iTF_00643138;
- 80% Identity
- iTF_00643138;