Eliv012488.1
Basic Information
- Insect
- Empis livida
- Gene Symbol
- -
- Assembly
- GCA_963932195.1
- Location
- OZ010648.1:12451623-12457508[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 1.5 6.4e+02 0.7 0.2 15 25 13 23 10 26 0.86 2 14 0.012 5.2 7.3 0.1 15 29 218 232 211 247 0.83 3 14 1.9 8.2e+02 0.3 0.2 16 38 281 300 276 305 0.75 4 14 2.4 1e+03 0.0 1.9 18 30 337 350 332 368 0.72 5 14 2.7e-07 0.00011 22.2 0.1 16 44 419 444 412 444 0.91 6 14 0.055 24 5.2 1.8 15 28 475 488 469 501 0.76 7 14 0.00017 0.072 13.3 0.3 17 44 511 536 502 536 0.92 8 14 0.11 47 4.3 2.9 14 43 567 593 560 594 0.71 9 14 0.068 29 4.9 2.5 9 27 596 614 590 616 0.79 10 14 2.6 1.1e+03 -0.1 0.9 13 24 659 670 653 686 0.70 11 14 1.1 4.8e+02 1.1 2.9 15 38 690 715 673 715 0.79 12 14 0.0007 0.3 11.3 3.2 6 44 710 745 705 745 0.92 13 14 0.82 3.5e+02 1.5 0.4 10 34 777 801 772 809 0.75 14 14 3.4 1.5e+03 -0.5 0.1 26 41 855 871 851 872 0.75
Sequence Information
- Coding Sequence
- ATGAATACGTCAACAATAATAAATGGTCCAgcccaatttaaaaatatttgtcgcGCTTGTCGAAAAATTAACAGAGATATGAGACCAATATTTAATTCTGAAATTAATTCTGTACAAGTATCACAAATGCTTTCCTTTGCTGTTGCAATTAATGTACGACCAGATGACAAACTACCAAAAGCGTTATGTTCGCCATGTTTGAAAAAACTAATAGATACTTATCAATTCCTACAAATGTGTATTGAGTCAGATGAAGAAATgcgtaatattttaaaaaataattttaatgttaaatctGTTATTGTTGAGAAAATACATAATCACCAACagcatcaaaatttattaccattCGCAGCAAAACCATTACTTAAAACtgctttattaaaaaataatgaatttggaaaaataGAAACACCGGTTCAATCACAAGATAATGACAATAATACTCATATTGATGTTATTGAATATGACGGTACActaattaaaTTCGAAAATCAAGATTACGATgaatttgacaattttgaatatggaGGTACTTCTGATAATAGAATTgtagaaacattaaaaatgagAAATCGTAATGAAAATCTGTCACGTgtaactaataaaaatcaagatataatttatagtGCTGACACGAGAATTggatatacaaatttaaaatgtaatttttgtgaaaagcAATTTATACGAAGAGATGATCTGGATAATCATGAAATAATTCACACttcaattaaaaataattcaacttatatacaaaaatccTCAGAATATTCAGATAAAACTATAACAATAAAAGATCGtttttctttaccATCAACCAACGAACCaattattggtaaattttcttGTGCCTTTTGCAAAAATACATTTCACACCTGGGAAAATTTAGCAAAACACATTGgagaacataaaattaaaagtatttatggTACTGATCCaggtaatccAATTGCTGTCAATAAAACTATACCAATGGATATTGAAAAATCGTCAATAACCCCTCATCAATGCACATATTGTTTGAAAAGATTTACTTATCGTGAAGATTTAATTTGTCATATGAACGACCACATAAACGAAATaaacattacaaaacatttagaaaattcttCAGACCAAATAATACAATTAGAAACAATTAGAGAAATTCCAATTGATATTGAAAACGAACAGCCTAGATTATcagaaaaAAATACTGACCCATCATCAGCTGAAAATGATAAAGAACCTTTAGTTGCAAATGATAAACCATCTTATGTATGTCAATATTGTGATGCCAAAATAAGTTatacttataatttaaaacgaCATATTGCAAGGAAACATCCTGAAAGTCTATCTAATGAGATTGTTAGAAAATTAGCAAGTAATTccgaaacaaaaacaaacatcaatgtgttaaattcaaattctaaaataaaaaattacaaatgcAATCATTgcggaaaattatttaaaaaatatttggatatGATTAGACATCGAAAAACTGTTCATACAATtattaaGATTAAAGTGGCTAAAACATATCAATGTCCACACTGTCCAAGTATAATTAAATggagtataaataatttagacaGACATATTAAAAGTGTACATCCACATGTTTCAAACAgcAAATCAGATCATATTCCAATTGCTGTTGGAACACCAGATCCGTccccaattaaaaataaacatataaatttacttaaacaGTTTATAAAATGTCAATACTGTGAGTTGACGCTTTGTAGTAAAGCCGATGTTCAACGACACATAATTAAAATGCATAAAGAATTTGCAAgcattggattaaaaaaatacgaatGCAAATATTGtggaaaaatgtttaaaaaatattttgatatgtGTGGCCATCAAAACCATCATAAAACACGAAATGATCCAATCTTGATACCACAAATTGAATCAAGTGTTATTGATGAAGGCGCAATAGATccattagaaataaataaagcaaataaaaaacatattcctGTACAATGCAATATTTGTCCAGTTGTTTTAcgtaatatttattcttaCAATCGACACATTAAACAAGTTCATGGACTTAAtgaaaaGTTTAATTGTAAACTATGTGTCAAACGTTTTAAAACTCCTAATGCCCTAAATACTCATTTCCTCTTAAATCAtagagaaaaaaGTAAATTCAATTGTGATCAATGTGAGAAATCGTATGAAAGATCTTCGGGTTTAACTAGACATAAGaaacaaaatcataattatgttaaacatattaattCTGCTGCCTTATATCAATCCTGCAGACGACATTATCGATCTGTACAttcagataaaattaatgaatatgaTAATGCCCAAAGGGAAGACCACAAATACAAATGTTCAGATTGTTACAAAACTTTTGGACGaagttataattataaaaaccatACCCAACGGCATTTAGTTTTTGATTTAGACAGTAGCAAAATAGTCCAAGTAAAgagacgtaaaattaaaacagaaGAAATGGAAagcagaaatttaataaaagtggAGGTTGAAAATCATGACAATAATTCAAAGAATATTGATAATGCAAATATAATATCATCAATAATAAACAATGTACAAGAATTAAGATCCCATCTGGAAACTTCAAATACTGTAGAAAATAACGCAACTGAACAATTAATACAGACTGATGTGCctgaacaaaaaaactaa
- Protein Sequence
- MNTSTIINGPAQFKNICRACRKINRDMRPIFNSEINSVQVSQMLSFAVAINVRPDDKLPKALCSPCLKKLIDTYQFLQMCIESDEEMRNILKNNFNVKSVIVEKIHNHQQHQNLLPFAAKPLLKTALLKNNEFGKIETPVQSQDNDNNTHIDVIEYDGTLIKFENQDYDEFDNFEYGGTSDNRIVETLKMRNRNENLSRVTNKNQDIIYSADTRIGYTNLKCNFCEKQFIRRDDLDNHEIIHTSIKNNSTYIQKSSEYSDKTITIKDRFSLPSTNEPIIGKFSCAFCKNTFHTWENLAKHIGEHKIKSIYGTDPGNPIAVNKTIPMDIEKSSITPHQCTYCLKRFTYREDLICHMNDHINEINITKHLENSSDQIIQLETIREIPIDIENEQPRLSEKNTDPSSAENDKEPLVANDKPSYVCQYCDAKISYTYNLKRHIARKHPESLSNEIVRKLASNSETKTNINVLNSNSKIKNYKCNHCGKLFKKYLDMIRHRKTVHTIIKIKVAKTYQCPHCPSIIKWSINNLDRHIKSVHPHVSNSKSDHIPIAVGTPDPSPIKNKHINLLKQFIKCQYCELTLCSKADVQRHIIKMHKEFASIGLKKYECKYCGKMFKKYFDMCGHQNHHKTRNDPILIPQIESSVIDEGAIDPLEINKANKKHIPVQCNICPVVLRNIYSYNRHIKQVHGLNEKFNCKLCVKRFKTPNALNTHFLLNHREKSKFNCDQCEKSYERSSGLTRHKKQNHNYVKHINSAALYQSCRRHYRSVHSDKINEYDNAQREDHKYKCSDCYKTFGRSYNYKNHTQRHLVFDLDSSKIVQVKRRKIKTEEMESRNLIKVEVENHDNNSKNIDNANIISSIINNVQELRSHLETSNTVENNATEQLIQTDVPEQKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00643545;
- 90% Identity
- iTF_00643545;
- 80% Identity
- iTF_00643545;