Eliv015117.1
Basic Information
- Insect
- Empis livida
- Gene Symbol
- sip1
- Assembly
- GCA_963932195.1
- Location
- OZ010649.1:890922-893803[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.7e-94 6.7e-90 301.6 14.1 1 275 411 677 411 677 0.98 2 2 0.034 3.4e+02 0.8 0.0 157 270 689 717 681 772 0.61
Sequence Information
- Coding Sequence
- ATGTCTGATAATGAATATGAACGTTTTGAAATAACAGATTATGatttacaaaatgaatttaatccAAATCGTAATCGCCGAAGACCAACAAgaaatcaacaaatttatgGTATTTGGGCTGATGATGACAGCGAAAATGAAGTTGATGTAGAATTAACAGGAAGACGCAATCGTCGTGGACGTGGTGGTAATGGAAATACTGCAAAAGATTATTCGGCACCAGTAAGTTTTGTTGCTGGTGGAATTCAACAAGCCGGTAAAAAAGACAAGACTGAGAAACAAGAAGAAGATGATTCACAAATAACAGATGAAGagGAAGAACAACCGCGATTTGGACAGAAACAATTAAATCAGTCACCCGATAATGGTAATACGTCATCAGAATCTGAGGAAGAACAACAGCGAACATCCAGACATACGACAAGGCCTAGTTTTGGTTCGGGAACTTCACATCAAAGCTCTAGCATGGGTGGTGGTGCGAATAAACTTGCCTCATGGGAACAACATACAAAAGGAATTGGTGCGAAACTTTTACTTCAAATGGGCTATGAACCGGGAAAGGGTTTGGGGAAAACTTTGCAAGGTATTTCACAACCTGTACAGGCACATGTACGGAAAGGACGTGGTGCTATTGGTGCTTATGGacccgaaaaaaaaacttctgtTGGAGgacaaaaaattcAACCAGCAATTGATGAAGATGTACGAGAATCAAAAGAATTCAAAGAAAAACTTAATCAATGGAAAAAAGATgataaaaaagacaaaaaaaccCGTTATTATTATCGTAGTGTACAAGAAGTGATTGAAAAGGGTAAAAAGACATCATCAATTATTAGTGATAAATTTAGcAATAAACTAAGTAATGTTACGGTCATCGATATGACTGGACCAGAAAAACGTGTTCTTAGTGGTTATCATGCACTTGGCCAAGCAAAAGTTATAGATGAAGAATTATATGAACATCGACAAgttaaaaaatgtacaaattttgtattaccAGAATTAatgcataatttaaatttaattgttgatATGTGTGAACAAGAAATTATATCAATTGATAAAAATGAACGTGATGCAAATGATAGACAAAAACAACTTGAAcatgataaagaaaatttattgaaaattgttaaattagaaGAAGATCATTTGGATACATTAGAAAAAGcattaattttagttgaaaaattaacaaatccAAATAGTGATAATAATCCATTAACATTAGAACATGctgaaaaaattttcattgaattacAAACTGATTTTGCTGGTGAATATAAAGAATTTGGTTTAGGTGATTTAGCAGCTGGTGTTGTTGCACCATTAGTTAATGCTGAATTAAGAAATTGGAAACCATTAGAGGAACCAACaaattatgtagaaaaaattaaaagatggAAGACTGTTTTAGGAATGCATCAAACGGAAACACGTAATGTTTTCGACCCATATTCATCATTAATTTGGTCTGGTGTTATGCCAAAATTACGTCTATGTTCATCCGAATGGAATCCAAAAAATCATCAACAAATGGCAGCTCTACTTGATACATGGGCACCAATATTACCAACATGGATTCTAGATAATGTTTTAGAACAATTAATATTACCACGTTTATCATCAGCTGTACAAGACTGGGATCCTTTAACTGATACAATACCAATACATATTTGGATTTTACCATGGAGTGGTATTTTAGGACATAAAATggaagaatttatttatccaACAATACGTGACAAACTTGGTAATGCATTACAAGCATGGATACCACAAGATCGTTCAGCTAGAGCAATGTTAACACCATGGAAACAAGCATTTCCGGATGGTGAAATGCaaagttttcttttacaaaatattataccaaaattacaagttgttttaaatgaatatattataaatccaTTACAACAAGATTTGGAAATGTGGAATCAAGTATGGGAATGGCATGAATTAATTTCAACACTTTTAATGGCAcaattattagataaattttttttcccaaaatgGATGCAAACATTAGTTTTATGGTTAAATCAATCACCAAATTTAGAACAAATATCTAGGTGGTATACTGGATGGAAAAGTTTAATATCTGATGATATATTAgaacaaacaaatataaaagaacATTTCCGACGTGCATTAGAACTAATGCATAGGGCAACTGGAGCACAAACCATGGATATACCACCACAACCTGTATCACAACCACAAATGACAACTAGCACTACTACTGGAACAACAATTGGACCACCGCCAGCTTTAATGGATTTACAAATACCACCACCCCCacaattagaatttaaagaattaGTTTCACAAAAATGTGCTGAACGAGGTATTATATTTGCACCAATGCCTGGCAGAAGAGAATTTGGCaaacaagtTTATAGAATTGGTAAATTATTCTGTTATATTGATCGAGCTGTTCTTATGATGAGTGATGGTAGCTTTACAAATTGGTCACCCATATCATTGTCAGTATTGTTGGATAGAGCTGTGACtggttaa
- Protein Sequence
- MSDNEYERFEITDYDLQNEFNPNRNRRRPTRNQQIYGIWADDDSENEVDVELTGRRNRRGRGGNGNTAKDYSAPVSFVAGGIQQAGKKDKTEKQEEDDSQITDEEEEQPRFGQKQLNQSPDNGNTSSESEEEQQRTSRHTTRPSFGSGTSHQSSSMGGGANKLASWEQHTKGIGAKLLLQMGYEPGKGLGKTLQGISQPVQAHVRKGRGAIGAYGPEKKTSVGGQKIQPAIDEDVRESKEFKEKLNQWKKDDKKDKKTRYYYRSVQEVIEKGKKTSSIISDKFSNKLSNVTVIDMTGPEKRVLSGYHALGQAKVIDEELYEHRQVKKCTNFVLPELMHNLNLIVDMCEQEIISIDKNERDANDRQKQLEHDKENLLKIVKLEEDHLDTLEKALILVEKLTNPNSDNNPLTLEHAEKIFIELQTDFAGEYKEFGLGDLAAGVVAPLVNAELRNWKPLEEPTNYVEKIKRWKTVLGMHQTETRNVFDPYSSLIWSGVMPKLRLCSSEWNPKNHQQMAALLDTWAPILPTWILDNVLEQLILPRLSSAVQDWDPLTDTIPIHIWILPWSGILGHKMEEFIYPTIRDKLGNALQAWIPQDRSARAMLTPWKQAFPDGEMQSFLLQNIIPKLQVVLNEYIINPLQQDLEMWNQVWEWHELISTLLMAQLLDKFFFPKWMQTLVLWLNQSPNLEQISRWYTGWKSLISDDILEQTNIKEHFRRALELMHRATGAQTMDIPPQPVSQPQMTTSTTTGTTIGPPPALMDLQIPPPPQLEFKELVSQKCAERGIIFAPMPGRREFGKQVYRIGKLFCYIDRAVLMMSDGSFTNWSPISLSVLLDRAVTG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01297391;
- 90% Identity
- iTF_00644092;
- 80% Identity
- -