Ehyp021911.2
Basic Information
- Insect
- Elymnias hypermnestra
- Gene Symbol
- -
- Assembly
- GCA_015832385.1
- Location
- JACTOM010000925.1:4220712-4230912[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.0081 0.65 11.2 0.9 3 23 206 227 205 227 0.94 2 23 0.17 14 7.1 0.3 1 22 602 623 602 623 0.95 3 23 5.5 4.5e+02 2.3 0.3 1 22 665 686 665 688 0.82 4 23 1.1 86 4.6 0.8 1 14 697 710 697 718 0.79 5 23 1.4 1.1e+02 4.2 0.2 2 20 726 744 725 748 0.88 6 23 0.026 2.1 9.6 0.1 3 23 768 789 766 789 0.94 7 23 0.028 2.3 9.5 4.3 1 23 795 818 795 818 0.95 8 23 0.1 8.3 7.7 0.0 1 23 844 867 844 867 0.90 9 23 0.0045 0.36 12.0 3.5 1 23 872 894 872 894 0.97 10 23 0.012 0.94 10.7 0.0 1 23 900 923 900 923 0.94 11 23 0.0019 0.15 13.2 1.3 1 23 935 957 935 957 0.97 12 23 0.0012 0.096 13.8 4.0 1 23 1000 1023 1000 1023 0.96 13 23 0.0035 0.28 12.4 1.6 1 23 1083 1106 1083 1106 0.96 14 23 0.00091 0.073 14.2 2.1 2 23 1127 1149 1126 1149 0.95 15 23 0.015 1.2 10.4 0.1 2 23 1155 1177 1154 1177 0.94 16 23 0.02 1.6 10.0 0.5 1 21 1221 1241 1221 1242 0.94 17 23 0.001 0.082 14.1 0.6 1 23 1252 1274 1252 1274 0.93 18 23 0.00022 0.018 16.2 0.4 2 23 1365 1387 1365 1387 0.93 19 23 1.5e-07 1.2e-05 26.1 1.1 3 23 1394 1414 1393 1414 0.98 20 23 0.19 15 6.9 0.2 3 23 1433 1453 1431 1454 0.92 21 23 0.1 8.3 7.8 0.0 1 23 1476 1498 1476 1498 0.97 22 23 0.023 1.8 9.8 0.6 1 23 1504 1527 1504 1527 0.95 23 23 0.00025 0.02 16.0 0.6 1 23 1535 1558 1535 1558 0.96
Sequence Information
- Coding Sequence
- atgaatGTGAATTACGATCGTGTTTGTAGACTGTGCTTGTCATCCCGATGTGAATTACTGCCGATATTTCCTACCACCAGTCCCGAGGACCCCGAGCCTCCTGTCCTCGCTTCGAAAATTAAAGATTGCGTGTCAGTGCAGATAAGCGAAAATGACGACCTGCCGACCAACGTCTGCAGGAAATGTATGGACAACGTCAACAATTGGCACGTTTTTAAGGCTGTGTGTGAAAGGGCACAAAACAAGTTACAGTCTCTGACTAATAAGGACAGCAGCCAACTGGAAGAGCTGAATATAAAGAGTGAACCTTTGTCTGATGAGGCTTATGATGATGGAGTGGTCATTGATGGCTCATATCCTGATAGTGAGAATGCAGGCCCTTCAAATAAGTTGCAGCCTGAGGGTCCTCCCATATTGGCTTCACTTGGTCTCACACCAAGAAGTGATaagggCATGGATAGTGAAAAGGACGAGGATTTTGAAGAGGAGGAAGATATGAATGAACAATCTTTCACGAACATGCCTCACATGCCTGAAGTGTCTATAACTGTAATGCGTCCAACTGGTGAAACTCTTCATGCTCGTCAAGGTATCCAACAAATTGCGTCCAAGGATTGTCTCGTATGCGGTCGTTCCTATAGATACTCGCATAACGCTCGCCGTCACGAACTCAGTGCTCATGGTTTCGATAGATACACAAACAAAACCACTGTTAAAAAAACCCATAATCATCTCCAGCCTAAGTTTCGACCAAATCCATTTAACCCCAAAGCACGCTTAATGCCGAACCCAATTAGCCACAAAATGCAATTCATGCCAAAACCAGTACAACCTAAAATGATGCCACAGAAAATTGTTGCCCCACCGAAACCTATCCCAATTAGAACCGCAAAAACTCAACAGAATAACTTACCGTACCCTCTGCGTATTAAAGCTTTAAAAGATTtgcaaataaagaaaaaggaaccacaaatattaaaaactttactaACGTCGAAACCCGAGGTTTTGGTCTCAGAACCAGAAATCATGAATTCAGGCCCAGAAAGTCCTGAGACTTTAATTTCAGAACCAGAAATAGCGTCGTTTCAAGTTGAGACGATATTATCTGAACCGGACGGTTTTATCAGTCAACCGCCTGACGACGATGAAATGGATGATGAAAATAATCAAGGGCCAAATTATGATACCGTCGAAATGGAATCtgataatgaaattgaaatagcTCGTCAACAAGAAAACAACATCGATTTTGATGAGAATCATATTGAAAATGATGCTGATGAACATCCACAAGAAgatgaaaataatgttgaacaaAACCATGACGAAAATGACAAAGAGCATAACGACGATAACATGGAAGGTCAAATGGAAAACAATATTGACGCAGAACACGATGAAAATGCTAAAGAAAATGACGAAGTGAATGTTGAAGGAGAAAATAACTATCAAGATAATCCTGAAGAAAATGAAGACTATGATGATTTACCTCCAATGGGCATTGCTCCTGTTGTTGAAATTAACGAGGACCTGCAAATGAACTATAATAATGAGGGAATTGAAGAGGAAGATGTTGACGAAACTGTTGATCCCAACGATACTGTCGATGGTGATGAAACAGCGAAAGAATTAGATCCAGATAAAGTATACGTTACTAAGACCCAGAGAGATTTTATTCTCAAATATCGCGATATCATTGAACAAATTAACACAAAACTCTGCTTGTGTTGTAATAAAGAACATCCAAGAAGAAAGGCAGTGATACAACATTTACAGAAAAATGGACACAAAGTTCCTAAACATACATGTTATAATTGTGTGATTACATTTGGACACATTGGAGCTTTGCTAAGCCATATGAGATCTAACACTTGCACTGATCTatggaaaataatatacaacGAAAACGGAATCACCGACGACATAGTATTAGAAGACGAACCCAAAGAAGATAAAGTACAATATAAAGATATACTTAACGCTCGATCTTACGCATGTAAATTGTGTCCAgctaaatttcaattgaaacaatttataatgaaGCATGTACTAGACGTTCATGAAGACGGCCAATCTAGAGTTCCGCATTCGTGTGTTCATTGCGGCTTGCGGTTTAAAGAAAAAAGTATAGGAAAAAGACACATTCGTAATGGAGAATGTACTGTTTATATTTCCTGCGACTTATGCTCCGAAAAATTCATGAATATGCATGAATTTAACGAGCACGCTGTAGCGATTCACGCTGGCAGCTTCGATCCCGATAGCCAGAATAAATGCGTCGATGGCAGACCGACAGATTGTCCCATATGCGGAAAGAAGAACAACAGCTATCCGAATTTAGTGAAACACTTAAAAGCTATACACAACGAGGAGAAGCCTCATCACTGTCAGCATTGCGAAGCTAAATTCGAGCAAACAGCCGATCTAAACAAGCACATTTACATGGAGCACTCGGATCGAATTTTAGGTATGACTTCCACGGAGCCGGATATGTCACTCGTAAAGGAAGAAGCCGAGGAATATCATTATTCCTGTACGGAATGTAATGCTATCTTCGAAACTGTCGACGCTTGGACGGACCACCAGGTCGCTGAACACAATCAAGTGGCCCACCACTGTGATCAATGTGACAAGAAATTCCTACGTCCATCAGAACTCGCCGAACACAAAAATACGCATCTCCGTGTTAAATTTTACCCGTGTAGTGTGTGCCCCAACTCATATAGCACGCCACAGAAACTCGCAGAGCATGCCCAACAGGCGCATCCTGGTGCTCCTATGCGCAATATTGATACCGAATTTTTCTGCGACATATGCATACGATCGTTCAAAAGTCGCCAAGCATATTCCAACCACATGCGTATACATGCTAAAGTACCAACTACTAATAGGAAGCCAGGGGAAGCAAAGGGATTCGCACCACAAATTATCGGCAAACCCATTCGCCAGTTTTCCATGCAGCCCGGCTTCAGTCCTTTCGTTCCTAATGCGCCTTATTGTTGCGATATTTGCGGCAAAGGGTTTATGCACAAGAAGAATATATGGAAACACAAGAAGGTGTTGCATGCCGACATCGTTAATGACAGAATCGACAGCGAAGAAAATACGATGCATGCGTCCACCGAAGAAGACGATTATAACGTCGATGAAAACGGTGCGATATTGTCGACGCCCCAGTTCGATAGTTTCAACTTTaccaatatttctaataacTCTATGCAGTCATCTCAAGATGCTCTACCTTACTCTTGCGAGCTTTGCTACAAACGTTTTCCGCTCAGGACGAGTTTGTGGAAGCACAAACGCGCTAAACACGGAATCATTAATACAAGCGTCGACGGTCAAACGCCACCGACATCCGCTGAAGGCAGATCGAGCTGCACAATATGCAAGATCACATTTTCGGATAAAAAGTCCTATTATCGTCATAGGAAGAACGTTCACAAATCCTCTGTACAGATGTGCAAAATTTGTGGCAAACCGCTCAGTTCGACTCTAGAACTATATGAGCATCTCAGAGCGGCTCACGCACGCGAACTGCTGGGCTACGACGCCAGTCAAGGCACAAGTAAAACGCAGGAAATGATACAAGAACCGGAAGTGGAATACGACGTAGACCCAGATCTAGTTGATCCCAGTGTAGACTATCAAGCTAGATACAACTGTAACACATGTGGCAAGCAGTTTGTGGGGATGTTGGCTCTACAGAATCATCAGTGTATAAGTCAGATGCAGTCGCAGCCACAAACTTTTGATTGTGAAATATGCCACAAGAGTTATACTTCCATTGCTGCCTTGAAAAGTCACCGCGGTTGGCATTTGCGCTCACCGGACGGCAAAGCCGCCGCTAACAATACTGGGCTTTGGATGCCCCAAAATAAAGTAACGACTAAAATTAGTAAACATGAGGTCATCGACCCTGTTCAGGCCCCTCGCGCACAACAATCGACGCCTAACACTAGTGCTCCGAAGAGAAGATTACCCCCAGAAGTGGAAGTGACCGTCGTAAATCCAAATAAGAAGTTGCGTTCCGATGATTCCCTAGAGATGGAACATCAGAACAATTTGTCCGGCGGAGCCGAGGATAGATACTGCAACCTTTGCGACAAAGAATTCACCAAGAGAGCGGCATACCAACGTCACATGGACGAGGTGCATCAGCCGAACTCCGTGTTTTGTCCGGTCTGCGATAAAAGCTTTACACGAAAGTCCACGCTAATCGTGCATATGAAAAAGCACTACGAATGTGGCGAAGGCACTTCAGCTTTAGGGCAAATGGACGATGAGCTGGCTTGCGATGTGTGCGGCGCTCAATTCGAGAGTGGGAAGTCATTGAGCGCGCATAAGGCTTTACATCACGCAGAAGATTCTGGCGACTCTGATGACGATGATGGGAGTACTACTGTGCAACAACCGGGGGAATTCACTTGCGGCCAGTGCGGTGATGGAGTCGCCACTCCCCGTGATCTGATAGCTCATCGTGCTATGCACGCTACACCTACTAAGTTCTTTTGCAATATATGTAAAGTCTACTTCGCTAGGGCCCTCGACCTTTCCTCCCACACACGGGCCAGGCACTCTGACAACGAGAAAGTGTTCTTCCCTTGTGCCATGTGCGACCGTTTTTATATGAACAAAAAGAGTTTGCAGCGGCACATCGAGATGATGCATTAG
- Protein Sequence
- MNVNYDRVCRLCLSSRCELLPIFPTTSPEDPEPPVLASKIKDCVSVQISENDDLPTNVCRKCMDNVNNWHVFKAVCERAQNKLQSLTNKDSSQLEELNIKSEPLSDEAYDDGVVIDGSYPDSENAGPSNKLQPEGPPILASLGLTPRSDKGMDSEKDEDFEEEEDMNEQSFTNMPHMPEVSITVMRPTGETLHARQGIQQIASKDCLVCGRSYRYSHNARRHELSAHGFDRYTNKTTVKKTHNHLQPKFRPNPFNPKARLMPNPISHKMQFMPKPVQPKMMPQKIVAPPKPIPIRTAKTQQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEIMNSGPESPETLISEPEIASFQVETILSEPDGFISQPPDDDEMDDENNQGPNYDTVEMESDNEIEIARQQENNIDFDENHIENDADEHPQEDENNVEQNHDENDKEHNDDNMEGQMENNIDAEHDENAKENDEVNVEGENNYQDNPEENEDYDDLPPMGIAPVVEINEDLQMNYNNEGIEEEDVDETVDPNDTVDGDETAKELDPDKVYVTKTQRDFILKYRDIIEQINTKLCLCCNKEHPRRKAVIQHLQKNGHKVPKHTCYNCVITFGHIGALLSHMRSNTCTDLWKIIYNENGITDDIVLEDEPKEDKVQYKDILNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSRVPHSCVHCGLRFKEKSIGKRHIRNGECTVYISCDLCSEKFMNMHEFNEHAVAIHAGSFDPDSQNKCVDGRPTDCPICGKKNNSYPNLVKHLKAIHNEEKPHHCQHCEAKFEQTADLNKHIYMEHSDRILGMTSTEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCDKKFLRPSELAEHKNTHLRVKFYPCSVCPNSYSTPQKLAEHAQQAHPGAPMRNIDTEFFCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPGEAKGFAPQIIGKPIRQFSMQPGFSPFVPNAPYCCDICGKGFMHKKNIWKHKKVLHADIVNDRIDSEENTMHASTEEDDYNVDENGAILSTPQFDSFNFTNISNNSMQSSQDALPYSCELCYKRFPLRTSLWKHKRAKHGIINTSVDGQTPPTSAEGRSSCTICKITFSDKKSYYRHRKNVHKSSVQMCKICGKPLSSTLELYEHLRAAHARELLGYDASQGTSKTQEMIQEPEVEYDVDPDLVDPSVDYQARYNCNTCGKQFVGMLALQNHQCISQMQSQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNTGLWMPQNKVTTKISKHEVIDPVQAPRAQQSTPNTSAPKRRLPPEVEVTVVNPNKKLRSDDSLEMEHQNNLSGGAEDRYCNLCDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLIVHMKKHYECGEGTSALGQMDDELACDVCGAQFESGKSLSAHKALHHAEDSGDSDDDDGSTTVQQPGEFTCGQCGDGVATPRDLIAHRAMHATPTKFFCNICKVYFARALDLSSHTRARHSDNEKVFFPCAMCDRFYMNKKSLQRHIEMMH*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00897124;
- 90% Identity
- -
- 80% Identity
- -