Basic Information

Insect: Elmis aenea
Gene Symbol: lrrfip2
Assembly: GCA_947652605.1
Location: OX393579.1:46432324-46444406[-]

Transcription Factor Domain

TF Family: LRRFIP
Domain: LRRFIP domain
PFAM: PF09738
TF Group: Unclassified Structure
Description: LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 3.7e-106 1.3e-101 340.8 33.4 1 300 226 521 226 521 0.95

2 2 0.039 1.4e+03 -0.7 4.4 129 225 545 582 522 596 0.50

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	3.7e-106	1.3e-101	340.8	33.4	1	300	226	521	226	521	0.95
2	2	0.039	1.4e+03	-0.7	4.4	129	225	545	582	522	596	0.50

Sequence Information

Coding Sequence: ATGAGTGATAAAGATTCCTTGGGAAGCACTGATTCGCTTAATGATATTTTGAACGATTTGGAGTCTGATGACGACGTGGACTCCCAAAATATTGTTGAGAAAAAAGCTGTAGGGGAATCCGGGGAAATCGGGAGTGCGGTGCGACAAGAACAAATTGTTCAAAAGGACAGTTGCAGTGTTGTAAATAAAGAAGTTGAACGAAACCATGCAGAAAGTGAGCTTAAAACAGGCGGAGAACGTACGCCCTCGGCAATCGTTAACGATTTGGAGACGGAAGATACCAAAATAGAAAAACTGACCCTAGAAAAAAATCTAGACGGCGTTCTAATCGCACAAGACAATCTAAAAGACGAAAATGACACAAGCGAGGTGTTTCCCAGTTCCTTGAATCAAAAAATCAACACAGATGTAAACGACAATGTAGAACTTCTTTCTTCAAACGACGTTCGAGTTCCGGTATTTGAAAAAAACGGCGCAGAAAAAATTGTCATCAAAGGGGCAACAGAAGATGACACGAGTGACTTCGGCGGTGATGTTTCAAATGAAGAAAAACTTGAAGATTCAGGGATAATAGACGAAGATGATACTGACTTGGAAACGCTACACGCAAAAGTTTCCAGAGGTCATGATGAAAATCACATTATTACACAGTTTCTTGATCATTGTAACGATGATGCCGAAGCACGTTTGTTGGCGAGACGGCAGGCCAGAGCGGAGGCACGAGAGATCCGCATGCGGGAACTGGAGCGGCAGCAGAAGGAACAAGAAGAAAATGCGGATAGACAATATGACATGTTGGAAGCAACGACAAGAACGACACGTACAACCGGCAACAAGTATTTGTCTAGCCGAAGGAGCTCTGAAGATTCCCTCGAAGATGGGGGTAGCCTGCGAGAAATGCGGCATGAACTTAAAGACGTGGAGGAGAAGTTTCGGAAGGCCATGATAGCCAATGCTCAACTCGATAATGATAAAGCAGCACAAACATATCAGTTGGAATTACTTAAAGATAGGTTAGAAGAATTAGAAGAAGAGCATTCAAGACTTCGTAGAGAGCATAGAGACAAATGTAGGGAACACGATCAATTAAAAAGGTTAGCAGCTCGACTGAAAGAAGATTTGGCTGTGACACGTTTTGAATTAGAAGAAAGGGACAAACTCATTGCCGAAAAAGGATTAGTAATTGTAATAGAAGACATAGAAGAAGAGCAAGTTGGCATCGGTGATACTAGCAGTAATACTGTTAACTGTGTTAGCAGTACGCCTAAAAAAGCACTAGTCAGTGCAGAAAATGCTCAATTATTAGAAAGTGTCGGAGAAGGAAGTTTAGATGTCCGATTGGCAAGGTTTGGCGCAGAAAAGAGAGAACTTCAAGATCAAATTAGTCATTTGCGTTTAGAATTAGAAGAAGAACGGAGCAAACGAAGAAAGCCGAGCGGTGTCACTCTGAACGGCCCGACCAGTGAAGCGGATTACGACGCCGACGACACACAAAAGGATGTCGGCAGACAACTGGCCGATTACAAATTCAGAGCTCAGAAAGCCGAACAGGATGTGGCAACACTGCAAACTACGGTCGCGAGGCTAGAAACGCAAGTCGTTCGGTATAAATCTGCGGCGGAATTGTACGAAAAGTCGGAAGAAGCGCTGAAGCAAGAAAAGAGAAAGTTGCAAAGAGAGTCCAGGGAGGCGCAGAACAGAGCCGAAGAATTGGAAACAGCAAATACGCACTTGTTAAAACGGTTAGACAAGTTAAAAAATGCCAAATCTGCATTACTCAAAGAACTTTGA
Protein Sequence: MSDKDSLGSTDSLNDILNDLESDDDVDSQNIVEKKAVGESGEIGSAVRQEQIVQKDSCSVVNKEVERNHAESELKTGGERTPSAIVNDLETEDTKIEKLTLEKNLDGVLIAQDNLKDENDTSEVFPSSLNQKINTDVNDNVELLSSNDVRVPVFEKNGAEKIVIKGATEDDTSDFGGDVSNEEKLEDSGIIDEDDTDLETLHAKVSRGHDENHIITQFLDHCNDDAEARLLARRQARAEAREIRMRELERQQKEQEENADRQYDMLEATTRTTRTTGNKYLSSRRSSEDSLEDGGSLREMRHELKDVEEKFRKAMIANAQLDNDKAAQTYQLELLKDRLEELEEEHSRLRREHRDKCREHDQLKRLAARLKEDLAVTRFELEERDKLIAEKGLVIVIEDIEEEQVGIGDTSSNTVNCVSSTPKKALVSAENAQLLESVGEGSLDVRLARFGAEKRELQDQISHLRLELEEERSKRRKPSGVTLNGPTSEADYDADDTQKDVGRQLADYKFRAQKAEQDVATLQTTVARLETQVVRYKSAAELYEKSEEALKQEKRKLQRESREAQNRAEELETANTHLLKRLDKLKNAKSALLKEL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -