Basic Information

Insect: Elegia similella
Gene Symbol: -
Assembly: GCA_947532085.1
Location: OX383928.1:10624738-10632803[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.053 4 8.9 4.6 1 23 84 107 84 107 0.98

2 18 6.6 5.1e+02 2.3 4.1 1 23 186 208 186 208 0.96

3 18 0.0039 0.3 12.5 0.7 2 23 214 235 213 235 0.97

4 18 0.24 18 6.9 4.9 2 22 503 523 502 523 0.95

5 18 4.4 3.4e+02 2.8 1.0 1 23 619 641 619 641 0.82

6 18 0.77 58 5.2 0.3 2 23 776 797 775 797 0.96

7 18 0.2 16 7.1 0.6 1 23 901 923 901 923 0.97

8 18 0.16 12 7.4 3.4 1 23 966 988 966 988 0.95

9 18 3.3e-05 0.0025 19.0 2.0 1 23 997 1019 997 1019 0.99

10 18 0.068 5.2 8.5 1.6 1 23 1101 1123 1101 1123 0.99

11 18 0.32 25 6.4 0.2 1 19 1179 1197 1179 1199 0.97

12 18 0.25 19 6.8 0.1 2 23 1208 1229 1207 1229 0.96

13 18 0.051 3.9 8.9 0.4 1 23 1293 1315 1293 1315 0.92

14 18 0.018 1.4 10.3 1.1 1 23 1321 1343 1321 1343 0.96

15 18 0.0087 0.66 11.4 2.6 1 23 1432 1454 1432 1454 0.97

16 18 0.00022 0.017 16.4 1.4 1 23 1460 1482 1460 1482 0.99

17 18 0.4 30 6.1 2.1 1 23 1573 1595 1573 1595 0.96

18 18 0.024 1.8 10.0 4.9 1 23 1606 1628 1606 1628 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.053	4	8.9	4.6	1	23	84	107	84	107	0.98
2	18	6.6	5.1e+02	2.3	4.1	1	23	186	208	186	208	0.96
3	18	0.0039	0.3	12.5	0.7	2	23	214	235	213	235	0.97
4	18	0.24	18	6.9	4.9	2	22	503	523	502	523	0.95
5	18	4.4	3.4e+02	2.8	1.0	1	23	619	641	619	641	0.82
6	18	0.77	58	5.2	0.3	2	23	776	797	775	797	0.96
7	18	0.2	16	7.1	0.6	1	23	901	923	901	923	0.97
8	18	0.16	12	7.4	3.4	1	23	966	988	966	988	0.95
9	18	3.3e-05	0.0025	19.0	2.0	1	23	997	1019	997	1019	0.99
10	18	0.068	5.2	8.5	1.6	1	23	1101	1123	1101	1123	0.99
11	18	0.32	25	6.4	0.2	1	19	1179	1197	1179	1199	0.97
12	18	0.25	19	6.8	0.1	2	23	1208	1229	1207	1229	0.96
13	18	0.051	3.9	8.9	0.4	1	23	1293	1315	1293	1315	0.92
14	18	0.018	1.4	10.3	1.1	1	23	1321	1343	1321	1343	0.96
15	18	0.0087	0.66	11.4	2.6	1	23	1432	1454	1432	1454	0.97
16	18	0.00022	0.017	16.4	1.4	1	23	1460	1482	1460	1482	0.99
17	18	0.4	30	6.1	2.1	1	23	1573	1595	1573	1595	0.96
18	18	0.024	1.8	10.0	4.9	1	23	1606	1628	1606	1628	0.98

Sequence Information

Coding Sequence: ATGCTCCAGCAGATGTCCTCGCAGCCGAGCGCACAAGTCGGCGAGGTCGCGTGTATCGGTCGTCCCTTCGAAGGTCGCTTGTATGGCGACGCCTCTTCGGAGGCCTCCTCCGACGCTGCAGAAGAACCCGACCTACCGCAGTGCAAAATAAGGCGGAACTACAACTGCGCGAAGTGCAAGTTTTATACGCAAAACCCCCGCGTATATCTTTTACACGTACGTGAAGTTCATTTCGAAAGATTTAAAATATACGTTTGCCCACATTGTGTTTACGCATCCCGGCATCACCAAAAACTTTTGAGACATTTGAAAATGGTACATGACAGCCGAAATTCAGTAATCAAGTTAGAACCTGAACCTGCCGTGTTGCCCCCATCAATGCCTAACAACGCAGAACGCCAAGAGCGAATGGAAGATCTCTTAGAAGAAGTTGAGGAGTGCGATGAGGAAATGGACGCAGAAGATGGCCAAGTCGAAGCCATGTACCGGTCTGCTGATGTTGAGGTGGACGTTGGCAGAACAACTGATGTAGCATCAAAGAACAAGGGAGATTACTTTAACTGTGATAAATGCAACTACGTGACGCATATAAAAGCGAGATTCACGAAACACGTTAAATACCATTCGATTCCTAGAATCAAATGTAGCATTTGTGAATTTCGGACACCATACAAATGGAATTTGGACCGACACATGAAGAACCACGGCGGCACCGGCAGCTTCAACTGCTGCATGTGCAACTTCACGGCGGACATAAAGCAAAGTCTGACGGCGCATGAAATGAATCACCACAGCCGGCCGATGGACCAGTCGGTGGGGAGGCGCGGCCGCAACCGTGTGGGTGCAAGCGACGTGTTAGTCAGCGCGCCGGCTTCAGTCGTCCCCAAGGAGGACGAAGGGAGCGGCGACTCGCGTTCCTCGCATTCGGACATGATGGGTTTGCAGTACATAGAGAGGGATACGATAAGTAACAGCGACTCTAACGATGCGCTGACTTCCGAGGTAGCTGCCAAGAAGGACGACTCGCAGTTGACACAAAGTGCGCAACATTCGCCCAATGCTTCAACGGACGACGCCAAGAGTCAAAAACAAAGTAGAAAGATACCCAGGCCGATACCGCAGCTCATACCGCTAAATGCGTCCACTCCCAACCAGGCCAAATCAACCGGAGAACCGCCGTCAAAGAAATTCAAAGAAAACCCATCCAACGAGTCGACCGACTCGAACTCCAACAGTAAACTCGATGCCTTACCAGCAGACATCACTGTAACACCGGTATCTAATACGTCTACAAAGGAAACTGTAGCACGCAAAAAGAATGAATCGTTCTTTGATAGACTAAAAGAACGAATACTTACAGAGACTGGAGATGAAGGCTCACTTAATTGTAAAAATTGTGGTTTTGTAAGTAAATGTCTCTCGGAACATTCGGTTCATGAAAAAAATTGCACTGCACAGTTCAATAATTCCGCCAAAAATACCTTGTTACCAAATTTAAGTTCAACACGATGCCAACATTGTCGACACAGATGCAAATCGAGTGCAGACCTGTATATCCATATGCAGACATGTAGGAAGAACGAAAAGCGGGGTGATCAGCCATTAGAAATTAAAAATCACGATAGCAACGAAGCTTCGTCTTCAAACAAAGATCGAGACGCAGGACCACATCCCATGGAGAATGTCGTTTTCGTTTGGAATAACATTAACGCAAATAATTTTGAAACCCCACTTGGTATTAACATCAATGACGATTCAACCCTTCCAGTTCTGCATAAATCATTCGAAAGTGAGATCGTAGATGACAACGAGAGCATGAACCTGTCACCGAGCCAGGCTGTGGGAAAAAGAGTATTCAAATGCCCACACTGTCCTTTCTGGGCTTCCACAGCATCCAGATTCCATGTTCATATTGTAGGCCACTTAAATAAGAAACCATTTGAATGTTCACTCTGCAAATACAAGTCGAATTGGCGGTGGGACATCACCAAACATATCAAACTAAAGTCTGCTAGGGATCCAGAACATAATGAAGCCAAAGTTTTAATGACCGATGAAACTGGGAGGAGAAACTATACAAAATATAGTAGGTTTCTCGCAATGCCCGTGTTAAATGAATATGGTGAAAATGAATTTCACTATGTCGATCAAAATGCTTCTGCTGATCCATCGCTTGAAGTTCATGACTCTCTTCATGATATTAATGACATGAACAGCTCGTATGAAATGCAGCCATTGAACTTACAGACTCAACATTTCGAACAAAAATATGACTTACTAGACGGAAGACTCATTGACGCCAGGAAACCTAAGAAAACGTTGTGGAAATGTAAAAAATGCAATTACAAGGACCCATCTAAAGAAGCATTGTTGGAACATGTTCGGGAGCACGCAAAGGCAGAGAGTGGCTCGGGCAGTAACCCTAACAAGAAACTAGAAAATCTTCCAGACCCAGCGGACTTGGCCTACCGCTGCGGCCACTGTAATCAATTGTCTAACTGGAAACATGTTATCCAGAGACATTGCCGATTGAAGCACGATGGCATCATTAAGGTCATAACTACTATTAAACCAAAACCAGAAACATCTTCTTCGAATGAAGTTACTGGTGATACATGCACCAAATGCCCGTTCAAATCAACCGAGAAAAAAATACTCATGATGCATCTACAGCAACATCAGCCTTCCCCAGACTCTATATTCAAATGCTACTTCTGCCCCTTCTTCGTCAAAGACGAACAAGAATTAGTCCAACATCTATTGCTGCATGGAATAACAGAGCCAGAAGAATATATCGCAAAAGCTATGGGCAGCAGATCGCCATTACCAGACGCCATCATCGTACCGGGCCCGTCGGGGTCCGCCAACACACCGGCCGGAGTATCCACTAAACGACACAAATGCACAGAATGCCCCTATGAAACAAACAGTAAATCACAGTATATGTATCATGAACAATTTCATCGTGCTCCTAATGAAACTCGAGAGTACAAATGCCCGGAATGCAATTACAGTGTTTCTAAAAGGCATTTACTAAATCAGCATTTGCGGGTGCACGGAATTATTACGAAGAAATCTGAATCCGAAGCAGAATTAGAAGCGATGGTCTCTGATCCTAACAAAACGGAAAAGTTAGAAGATTTGCCAGTGCTAGAGGAAATCCCATATGTCTGGGTATCGGCCAAAAATGAATTCCACAAAATGTACAAGTGTCGATTTTGTTCTTACGTAAACTCGCAGAAGTGCAAAATACCAAATCATGAAAAGATTCACTGCATAGAAAATAGCGACACAACTGTATACAAGTGCTGGGAATGTAAATTCACTTGTGACAACGCAGGGAGACTAGCCGAACATTCCAAAACCCATGGCGAAATCTACGGTCGAATATATTGCCCTGTGGAACCTGAAGTCCCTGATGAGGAACAAATTGCTAAATTGCGTAAAGTAATCGAAGCTGAAAAATCCAGTACTTCGGAAGAGACGCATAAAGAAGAAATATTAGCACCTGAGAACAAGGAAATAAAAATCTTATACTTCTGCCAAAAATGTCCATCAAGGTTCTACACAGAAGAAGATTTGGCAGCTCACGACACAGGCCATAAAGAAAACTTTTCTAATAAATGTAAAAGTTGTGAATTTTCAGTATCTGAACAAGAAGAGTTGGAAGCTCATGCGATTGTTCATACGGACGAGTATCATACAAAAACAAAAATGTTAAAGTTTATACACAACACGAATCCGGCTCATACTCAACCTCGGCTGGAGCTCGTCCATTGCCCAGCTACTTCTGAAATTACTTGGATTGTATCGAACAAAACCTATGATGAGTCTACTTTTAGGAGGTCGGGTGACAACAAACATGCACCAAAACAGTACCTTTGCAAAGAATGTCCAGCAAAATTCTTCAAAAGCTCAGCTCTCAGCTACCACCTAGGCCTGCATGGGAGCGATGGCGAACACAAGTGCAAAAAATGTAGTTACGCTGTTAAGAATATAGGAAACTTAGCTAAACACGAATTACTACATGAAAATGAACATAAACAGCCTGGCGACTACGACTCCGGTGATGATATGGATTACAAAAATATACCGCTGTCAGGAACGGATTTATTCCAAAGAAAGACTGAAGCTCAAAAGCGAGTTTTGACCGACAAGGATAAACTTGTAAAGCCTAATGACCACTTCCCGCCGGTTCTACAAGCTGATCCACAATTTGGCTATCTGATGCACGGCAATCCTGAATTTATATATCCCACTTACTTAAAGAATGGAAGGCAGAAAGAAAAACGTTACAAGTGCCACAAGTGTCCTTCGGCGTTTGAAAAAAGAGAACAATATAAGATACACTTATCATTACACGGATCTAAACAGAGATACAAATGCGAATTATGTGACTACTCCGTAAAGTATTACGCAAATTACGTCCAGCACATGAGAAAACATCAAATGAACGACGAGGCTCAAGCTGAGAGGAAAAAAGGCAACAATGGTTTGACAGAAACGGAGATCCAAGAAACTAAACAAGACGATAGCGGGGATAACATAAAGCTAGCAATTAAAACAATGCCGCGCGCTACAGCCAAGAGCGACTTCCAACAATTTTCGATAAGCGATCAACAAACTCTTCGCCTGCTTCAAAGAAGGCGTTCTATAAATAGCGCTGGAAAGGATCCAAACGCGAATGAAACGACGTCGCCTTCAAATCGAAAATTGCACATGTGCCTTTTATGCCCGTACACGAACCAACGGCAGGACGCCCTGACGAACCATTACCGAAGACACGACGACACGGACGTGCTCAATGCTGGCACTCACAAATGCTCTTACTGCGACTTAGTAGTCTTTCAATCCCATTTCCTTCGAGAACATCTTAAAACTCATTTCAGCTATCAGAAAACGCTTACTGCGGAATGTTTTGTTGCCAACAAAGATGTGAGTTTTACTATAACTCAAATAGACGATGAAAACCTGTCTACAGATCTCAAGTTAGATATACGAAACAAGAAATACACGTGTAACGAAGATAAAATGTACGTGAAAATAAAAACTGGAGAACTTATGGTGGAGTAA
Protein Sequence: MLQQMSSQPSAQVGEVACIGRPFEGRLYGDASSEASSDAAEEPDLPQCKIRRNYNCAKCKFYTQNPRVYLLHVREVHFERFKIYVCPHCVYASRHHQKLLRHLKMVHDSRNSVIKLEPEPAVLPPSMPNNAERQERMEDLLEEVEECDEEMDAEDGQVEAMYRSADVEVDVGRTTDVASKNKGDYFNCDKCNYVTHIKARFTKHVKYHSIPRIKCSICEFRTPYKWNLDRHMKNHGGTGSFNCCMCNFTADIKQSLTAHEMNHHSRPMDQSVGRRGRNRVGASDVLVSAPASVVPKEDEGSGDSRSSHSDMMGLQYIERDTISNSDSNDALTSEVAAKKDDSQLTQSAQHSPNASTDDAKSQKQSRKIPRPIPQLIPLNASTPNQAKSTGEPPSKKFKENPSNESTDSNSNSKLDALPADITVTPVSNTSTKETVARKKNESFFDRLKERILTETGDEGSLNCKNCGFVSKCLSEHSVHEKNCTAQFNNSAKNTLLPNLSSTRCQHCRHRCKSSADLYIHMQTCRKNEKRGDQPLEIKNHDSNEASSSNKDRDAGPHPMENVVFVWNNINANNFETPLGININDDSTLPVLHKSFESEIVDDNESMNLSPSQAVGKRVFKCPHCPFWASTASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNEAKVLMTDETGRRNYTKYSRFLAMPVLNEYGENEFHYVDQNASADPSLEVHDSLHDINDMNSSYEMQPLNLQTQHFEQKYDLLDGRLIDARKPKKTLWKCKKCNYKDPSKEALLEHVREHAKAESGSGSNPNKKLENLPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGIIKVITTIKPKPETSSSNEVTGDTCTKCPFKSTEKKILMMHLQQHQPSPDSIFKCYFCPFFVKDEQELVQHLLLHGITEPEEYIAKAMGSRSPLPDAIIVPGPSGSANTPAGVSTKRHKCTECPYETNSKSQYMYHEQFHRAPNETREYKCPECNYSVSKRHLLNQHLRVHGIITKKSESEAELEAMVSDPNKTEKLEDLPVLEEIPYVWVSAKNEFHKMYKCRFCSYVNSQKCKIPNHEKIHCIENSDTTVYKCWECKFTCDNAGRLAEHSKTHGEIYGRIYCPVEPEVPDEEQIAKLRKVIEAEKSSTSEETHKEEILAPENKEIKILYFCQKCPSRFYTEEDLAAHDTGHKENFSNKCKSCEFSVSEQEELEAHAIVHTDEYHTKTKMLKFIHNTNPAHTQPRLELVHCPATSEITWIVSNKTYDESTFRRSGDNKHAPKQYLCKECPAKFFKSSALSYHLGLHGSDGEHKCKKCSYAVKNIGNLAKHELLHENEHKQPGDYDSGDDMDYKNIPLSGTDLFQRKTEAQKRVLTDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERKKGNNGLTETEIQETKQDDSGDNIKLAIKTMPRATAKSDFQQFSISDQQTLRLLQRRRSINSAGKDPNANETTSPSNRKLHMCLLCPYTNQRQDALTNHYRRHDDTDVLNAGTHKCSYCDLVVFQSHFLREHLKTHFSYQKTLTAECFVANKDVSFTITQIDDENLSTDLKLDIRNKKYTCNEDKMYVKIKTGELMVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00720882;
90% Identity: iTF_01302933;
80% Identity: -